Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_F15
(475 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 100 2e-21
BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 100 2e-21
BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 100 2e-21
BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 100 2e-21
AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 100 2e-21
AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 100 2e-21
X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 100 5e-21
BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 98 1e-20
X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 93 6e-19
BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 35 0.13
>BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 100 bits (240), Expect = 2e-21
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +2
Query: 152 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRF 292
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRF
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRF 79
Score = 85.4 bits (202), Expect = 9e-17
Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = +3
Query: 291 FDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 443
FDV + D+E+W NLLPSRQFG++VLTTS GIMDHE A KH GGKILGFFF
Sbjct: 79 FDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.0 bits (124), Expect = 3e-07
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +1
Query: 58 LRMNVLSDALKSIHNAEKRGKRQVLIRP 141
+RMNVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRP 29
>BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 100 bits (240), Expect = 2e-21
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +2
Query: 152 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRF 292
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRF
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRF 79
Score = 85.4 bits (202), Expect = 9e-17
Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = +3
Query: 291 FDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 443
FDV + D+E+W NLLPSRQFG++VLTTS GIMDHE A KH GGKILGFFF
Sbjct: 79 FDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.0 bits (124), Expect = 3e-07
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +1
Query: 58 LRMNVLSDALKSIHNAEKRGKRQVLIRP 141
+RMNVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRP 29
>BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 100 bits (240), Expect = 2e-21
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +2
Query: 152 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRF 292
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRF
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRF 79
Score = 85.4 bits (202), Expect = 9e-17
Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = +3
Query: 291 FDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 443
FDV + D+E+W NLLPSRQFG++VLTTS GIMDHE A KH GGKILGFFF
Sbjct: 79 FDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.0 bits (124), Expect = 3e-07
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +1
Query: 58 LRMNVLSDALKSIHNAEKRGKRQVLIRP 141
+RMNVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRP 29
>BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 100 bits (240), Expect = 2e-21
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +2
Query: 152 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRF 292
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRF
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRF 79
Score = 85.4 bits (202), Expect = 9e-17
Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = +3
Query: 291 FDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 443
FDV + D+E+W NLLPSRQFG++VLTTS GIMDHE A KH GGKILGFFF
Sbjct: 79 FDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.0 bits (124), Expect = 3e-07
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +1
Query: 58 LRMNVLSDALKSIHNAEKRGKRQVLIRP 141
+RMNVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRP 29
>AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein.
Length = 130
Score = 100 bits (240), Expect = 2e-21
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +2
Query: 152 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRF 292
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRF
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRF 79
Score = 85.4 bits (202), Expect = 9e-17
Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = +3
Query: 291 FDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 443
FDV + D+E+W NLLPSRQFG++VLTTS GIMDHE A KH GGKILGFFF
Sbjct: 79 FDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.0 bits (124), Expect = 3e-07
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +1
Query: 58 LRMNVLSDALKSIHNAEKRGKRQVLIRP 141
+RMNVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRP 29
>AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein.
Length = 130
Score = 100 bits (240), Expect = 2e-21
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +2
Query: 152 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRF 292
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRF
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRF 79
Score = 85.4 bits (202), Expect = 9e-17
Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = +3
Query: 291 FDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 443
FDV + D+E+W NLLPSRQFG++VLTTS GIMDHE A KH GGKILGFFF
Sbjct: 79 FDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.0 bits (124), Expect = 3e-07
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +1
Query: 58 LRMNVLSDALKSIHNAEKRGKRQVLIRP 141
+RMNVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRP 29
>X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 99.5 bits (237), Expect = 5e-21
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +2
Query: 152 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRF 292
VIV+FLT+MMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRF
Sbjct: 33 VIVRFLTLMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRF 79
Score = 85.4 bits (202), Expect = 9e-17
Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = +3
Query: 291 FDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 443
FDV + D+E+W NLLPSRQFG++VLTTS GIMDHE A KH GGKILGFFF
Sbjct: 79 FDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.0 bits (124), Expect = 3e-07
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +1
Query: 58 LRMNVLSDALKSIHNAEKRGKRQVLIRP 141
+RMNVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRP 29
>BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +2
Query: 152 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPR 289
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPR
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPR 78
Score = 83.0 bits (196), Expect = 5e-16
Identities = 37/51 (72%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = +3
Query: 294 DVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 443
DV + D+E+W NLLPSRQFG++VLTTS GIMDHE A KH GGKILGFFF
Sbjct: 80 DVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.0 bits (124), Expect = 3e-07
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +1
Query: 58 LRMNVLSDALKSIHNAEKRGKRQVLIRP 141
+RMNVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRP 29
>X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous
to yeast S24 protein.
Length = 129
Score = 92.7 bits (220), Expect = 6e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +2
Query: 167 LTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRF 292
LTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRF
Sbjct: 37 LTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRF 78
Score = 85.4 bits (202), Expect = 9e-17
Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = +3
Query: 291 FDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 443
FDV + D+E+W NLLPSRQFG++VLTTS GIMDHE A KH GGKILGFFF
Sbjct: 78 FDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 129
Score = 48.0 bits (109), Expect = 2e-05
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +1
Query: 58 LRMNVLSDALKSIHNAEKRGKRQVLIRPXFQSHR 159
+RMNVL+DALKSI+NAEKRGKR+ L+ QSHR
Sbjct: 2 VRMNVLADALKSINNAEKRGKRRCLL-GRLQSHR 34
>BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for
MGC:88417) protein.
Length = 37
Score = 35.1 bits (77), Expect = 0.13
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 58 LRMNVLSDALKSIHNAEKRGKRQVLIR 138
+ MNVL+ ALKSI+N + RGK QVL R
Sbjct: 2 VHMNVLTIALKSINNVKTRGKHQVLRR 28
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,541,626
Number of Sequences: 237096
Number of extensions: 995337
Number of successful extensions: 1302
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -