Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F14
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   3.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/43 (20%), Positives = 22/43 (51%)
 Frame = -3

Query: 538  LLYSGQXSXF*VXHHAEISHCLVPIEFVLFLSFXCKAFCEILV 410
            +L     + F + +     + ++PI F + + F CK+  +++V
Sbjct: 930  MLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIV 972


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/43 (20%), Positives = 22/43 (51%)
 Frame = -3

Query: 538  LLYSGQXSXF*VXHHAEISHCLVPIEFVLFLSFXCKAFCEILV 410
            +L     + F + +     + ++PI F + + F CK+  +++V
Sbjct: 930  MLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIV 972


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/43 (20%), Positives = 22/43 (51%)
 Frame = -3

Query: 538  LLYSGQXSXF*VXHHAEISHCLVPIEFVLFLSFXCKAFCEILV 410
            +L     + F + +     + ++PI F + + F CK+  +++V
Sbjct: 930  MLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIV 972


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/43 (20%), Positives = 22/43 (51%)
 Frame = -3

Query: 538  LLYSGQXSXF*VXHHAEISHCLVPIEFVLFLSFXCKAFCEILV 410
            +L     + F + +     + ++PI F + + F CK+  +++V
Sbjct: 930  MLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIV 972


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 641 APRRCTINTNSLTKAAAXSPS 579
           +P   +IN N+ T ++A SPS
Sbjct: 155 SPTPVSINNNTSTSSSASSPS 175


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 99  SIKNVFDLQRLHWLLSSFT 155
           S++ + +L  LH+ L++FT
Sbjct: 253 SVQKIQELSHLHYKLANFT 271


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 99  SIKNVFDLQRLHWLLSSFT 155
           S++ + +L  LH+ L++FT
Sbjct: 209 SVQKIQELSHLHYKLANFT 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,085
Number of Sequences: 336
Number of extensions: 2355
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)