Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F14
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006617-1|AAF39770.2|  397|Caenorhabditis elegans Hypothetical ...    48   4e-06
Z93381-5|CAB07608.2|  720|Caenorhabditis elegans Hypothetical pr...    32   0.31 
Z83218-4|CAB05690.2|  706|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z93381-6|CAB07609.1|  724|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z83218-8|CAB05693.1|  724|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z81533-14|CAB04331.2|  707|Caenorhabditis elegans Hypothetical p...    28   6.7  
Z81543-1|CAB04423.2|  543|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>AC006617-1|AAF39770.2|  397|Caenorhabditis elegans Hypothetical
           protein C39B5.6 protein.
          Length = 397

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
 Frame = +1

Query: 430 PYXKSSKIKQIQLEQDSGKSLH---DAXLKXSLXDLNRAGAPLIXVVFEP 570
           PY K  +I Q+QLEQDSGK++H    A    SL D NRAG  L+ +V  P
Sbjct: 26  PYWKEVEILQLQLEQDSGKTIHMTSQAAPPTSLIDYNRAGCALVEIVTSP 75


>Z93381-5|CAB07608.2|  720|Caenorhabditis elegans Hypothetical
           protein F28G4.5 protein.
          Length = 720

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 17/67 (25%), Positives = 33/67 (49%)
 Frame = +1

Query: 58  NFITIY*NLFNLNDPLKMYSTCRGYIGFCRPLPLLIFV*SCNWTCCLITKILKKSKCDIS 237
           +++ +Y  L   + PL  YST + ++ +  P  LL ++ +  W+C      LK  K  I 
Sbjct: 611 HYVVLYFYLMIGDGPLHFYSTFQLFMYYAVPTTLLSYIFAFFWSCLFEVPFLKLEKMLIE 670

Query: 238 LILLLIK 258
            +++  K
Sbjct: 671 TMIVRAK 677


>Z83218-4|CAB05690.2|  706|Caenorhabditis elegans Hypothetical
           protein C31A11.7 protein.
          Length = 706

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +1

Query: 58  NFITIY*NLFNLNDP-LKMYSTCRGYIGFCRPLPLLIFV*SCNWTCCLITKILKKSKCDI 234
           +F T++  L N+ND  +  YST + +I +  P  LL ++ +  W+      ILK  K  I
Sbjct: 615 HFFTLFWYL-NINDSSMHFYSTFQVFIYYAVPACLLSYIFAFFWSSLFEIPILKLKKMMI 673

Query: 235 SLIL 246
             IL
Sbjct: 674 EAIL 677


>Z93381-6|CAB07609.1|  724|Caenorhabditis elegans Hypothetical
           protein C31A11.1 protein.
          Length = 724

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/63 (23%), Positives = 30/63 (47%)
 Frame = +1

Query: 58  NFITIY*NLFNLNDPLKMYSTCRGYIGFCRPLPLLIFV*SCNWTCCLITKILKKSKCDIS 237
           +++ +Y  L     PL  YS+ + ++ +  P  LL ++ +  W+C      LK  K  I 
Sbjct: 619 HYVVLYMYLMIGVGPLHFYSSFQLFMYYAVPTTLLSYIFAFFWSCLFEVPFLKLEKMLIE 678

Query: 238 LIL 246
            ++
Sbjct: 679 TMI 681


>Z83218-8|CAB05693.1|  724|Caenorhabditis elegans Hypothetical
           protein C31A11.1 protein.
          Length = 724

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/63 (23%), Positives = 30/63 (47%)
 Frame = +1

Query: 58  NFITIY*NLFNLNDPLKMYSTCRGYIGFCRPLPLLIFV*SCNWTCCLITKILKKSKCDIS 237
           +++ +Y  L     PL  YS+ + ++ +  P  LL ++ +  W+C      LK  K  I 
Sbjct: 619 HYVVLYMYLMIGVGPLHFYSSFQLFMYYAVPTTLLSYIFAFFWSCLFEVPFLKLEKMLIE 678

Query: 238 LIL 246
            ++
Sbjct: 679 TMI 681


>Z81533-14|CAB04331.2|  707|Caenorhabditis elegans Hypothetical
           protein F36G9.12 protein.
          Length = 707

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +1

Query: 100 PLKMYSTCRGYIGFCRPLPLLIFV*SCNWTCCLITKILKKS 222
           P+  YST + +I +  P+ ++ ++ +  W+C      LKK+
Sbjct: 628 PMHYYSTFQVWIYYAVPVTIIAYIFAFFWSCLFEIPTLKKN 668


>Z81543-1|CAB04423.2|  543|Caenorhabditis elegans Hypothetical
           protein F49B2.1 protein.
          Length = 543

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 107 KCIRLAEATLAFVVLYLFSFLFEVVTGLA 193
           KC+RLA   + F+ L  FSF  E    LA
Sbjct: 11  KCLRLAALHMKFIDLIRFSFTCETAKNLA 39


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,071,215
Number of Sequences: 27780
Number of extensions: 210873
Number of successful extensions: 428
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)