Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F12
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1264 + 35321972-35322448,35323022-35323252,35323903-353245...    30   1.8  
01_03_0200 + 13744735-13745037,13745071-13745610,13745704-137458...    29   4.2  
10_08_0743 + 20249478-20250021,20250673-20250740,20250923-20250964     28   7.4  
10_08_0044 + 14405899-14406183                                         28   7.4  
10_01_0133 + 1621574-1625779                                           28   7.4  
08_02_0747 - 20728073-20728081,20728167-20728353,20728810-207289...    28   7.4  
05_05_0276 + 23771233-23771268,23773552-23773897,23774425-237745...    27   9.8  

>02_05_1264 +
           35321972-35322448,35323022-35323252,35323903-35324565,
           35324698-35324806,35324965-35325383
          Length = 632

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 384 IWRLHDQDLPSLDRQEGVDTNWYF 455
           ++RL   DLPSL R    D  WYF
Sbjct: 53  LYRLEPWDLPSLSRIRSRDAQWYF 76


>01_03_0200 +
           13744735-13745037,13745071-13745610,13745704-13745862,
           13748992-13749123,13749282-13749472,13749541-13749792,
           13750248-13750323,13750411-13750602,13750688-13750689,
           13753230-13753287,13753736-13754941
          Length = 1036

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = +3

Query: 213 YGSNLFKKRIRINNPTAEFLGVGRLDNHQLXFIKYSEHWRGASAT-IIPTEHAHVWGAIW 389
           Y  +L K+++ I    A+ +G   L       IK + +++G         E+  V G  +
Sbjct: 490 YKKSLHKQKMII---VAQCIGRAFLHFQNKRVIKATYNFKGTILCGYYACEYLRVTGR-Y 545

Query: 390 RLHDQDLPSLDRQEGVD 440
           R++ +DLPS++R+EG D
Sbjct: 546 RVNAEDLPSIERREGFD 562


>10_08_0743 + 20249478-20250021,20250673-20250740,20250923-20250964
          Length = 217

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 558 PLERRPCITYLXCIIXGAVECEL 626
           P+ + P  TY  CI+ G  EC +
Sbjct: 116 PIGKNPMYTYRECIVLGETECSI 138


>10_08_0044 + 14405899-14406183
          Length = 94

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 378 GAIWRLHDQDLPSLDRQEGVDTN 446
           G+IWR  D D+ +  R+EG D N
Sbjct: 59  GSIWRGSDSDISAAKRREGDDEN 81


>10_01_0133 + 1621574-1625779
          Length = 1401

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 160 HFHVR*WIRSKIPFCILRMGVICLKNVSVSTI 255
           HFHVR W+   + F +LR+      N+  S +
Sbjct: 249 HFHVRIWVHVSLRFDVLRLTKEIFNNMVASEV 280


>08_02_0747 -
           20728073-20728081,20728167-20728353,20728810-20728913,
           20729008-20729139,20729583-20729810,20730263-20730358,
           20730440-20730511,20730588-20730760,20730947-20731000,
           20731086-20731134,20731228-20731326,20731420-20731511,
           20731607-20731832,20731927-20732100,20732186-20732809,
           20732890-20733033,20733108-20733218,20733516-20733650,
           20733963-20733989
          Length = 911

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +3

Query: 147 LMLNSFSRKMMDPIKDTFLYFAYGSNLFKKRIRINNPTAEFLGVGRLDNHQLXF-IKYSE 323
           +M N  +R M+D  K  F  FA    +    ++  NP+         D  +L F I Y  
Sbjct: 718 MMYNKMNRIMLDSQKQNFKTFASPERVLLCNMKNFNPSTSGTKPIHHDLRRLFFPILYKR 777

Query: 324 HW 329
           HW
Sbjct: 778 HW 779


>05_05_0276 +
           23771233-23771268,23773552-23773897,23774425-23774541,
           23774712-23774810,23774949-23775016,23775107-23775181,
           23775386-23775931,23776040-23776092,23776163-23776204,
           23776314-23776458,23776541-23776651,23777496-23777921,
           23778116-23778373
          Length = 773

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/32 (34%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +3

Query: 387 WRLHDQDLPSLDRQEGVDTNW--YFAKSVNVM 476
           +R+H++D P+L R EG++ +   +  K+ N+M
Sbjct: 185 FRIHNEDFPALPRLEGMELHRKDHLPKNANIM 216


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,071,516
Number of Sequences: 37544
Number of extensions: 271972
Number of successful extensions: 443
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)