Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_F12
(652 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27569| Best HMM Match : UPF0131 (HMM E-Value=0.0061) 39 0.003
SB_32590| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_15292| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_19520| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_56633| Best HMM Match : CbiX (HMM E-Value=4.6) 30 1.9
SB_20065| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_9399| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_15291| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_10829| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_37646| Best HMM Match : Cob_adeno_trans (HMM E-Value=6.9) 28 5.7
SB_37336| Best HMM Match : Peptidase_S7 (HMM E-Value=2.7) 28 5.7
SB_27882| Best HMM Match : Cob_adeno_trans (HMM E-Value=3.6) 28 5.7
SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_13192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_27569| Best HMM Match : UPF0131 (HMM E-Value=0.0061)
Length = 140
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 282 RLDNHQLXFIKYSEHWRG-ASATIIPTEHAHVWGAIWRLHDQDLPSLDRQEGVDTNWYFA 458
+LD ++L F Y + G SA+I+ + V GA++ L L LD+ E VD Y
Sbjct: 20 KLDGYKLGF--YFNNGTGFGSASIVREPKSVVHGALYTLEKGGLEKLDKFEWVDREGYRR 77
Query: 459 KSVNVMTSDGVSVQCRTYQQT 521
V V G V+C Y T
Sbjct: 78 VQVTVELDSGEKVECTAYIAT 98
>SB_32590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 441 TNWYFAKSVNVMTSDGVSVQCRTYQQTINPPLRKNGEXLPLERRPCI 581
++W F + S+ V+ +C+ +QT+ + NG+ LP + P I
Sbjct: 139 SDWEFTSGFTSIVSELVNNRCKEARQTLEHIAKLNGKNLPSDVMPAI 185
>SB_15292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 983
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 178 WIRSKIPFCILRMGVICLK 234
WIRSK+ F +LR ++CL+
Sbjct: 938 WIRSKVSFALLRAALLCLR 956
>SB_19520| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 178 WIRSKIPFCILRMGVICLK 234
WIRSK+ F +LR ++CL+
Sbjct: 458 WIRSKVSFALLRAALLCLR 476
>SB_56633| Best HMM Match : CbiX (HMM E-Value=4.6)
Length = 344
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 178 WIRSKIPFCILRMGVICLK 234
WIR+K+ F ILR ++CL+
Sbjct: 300 WIRAKVSFAILRSALLCLR 318
>SB_20065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 178 WIRSKIPFCILRMGVICLK 234
WIR+K+ F ILR ++CL+
Sbjct: 118 WIRAKVSFAILRSALLCLR 136
>SB_9399| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 651
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 178 WIRSKIPFCILRMGVICLK 234
WIR+K+ F ILR ++CL+
Sbjct: 606 WIRAKVSFAILRSALLCLR 624
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 248 DTDTFFKQITPIRKIQKGIFDRIHHLT 168
D D ++ + RK++KGIF R+H T
Sbjct: 172 DEDHIYETVDKPRKVKKGIFRRVHKKT 198
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 28.7 bits (61), Expect = 4.3
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 178 WIRSKIPFCILRMGVICLK 234
WIR+++ F +LR +ICL+
Sbjct: 1510 WIRARVSFALLRSALICLR 1528
>SB_15291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 747
Score = 28.3 bits (60), Expect = 5.7
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +1
Query: 178 WIRSKIPFCILRMGVICLK 234
WIR+++ F +LR ++CL+
Sbjct: 704 WIRARVSFALLRSALVCLR 722
>SB_10829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 178 WIRSKIPFCILRMGVICLK 234
WIR+K+ F LR ++CL+
Sbjct: 372 WIRAKVSFAFLRSALLCLR 390
>SB_37646| Best HMM Match : Cob_adeno_trans (HMM E-Value=6.9)
Length = 497
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +3
Query: 423 RQEGVDTNWYFAKSVNVMTSDGVSVQCRTYQQTINPPLRKNGEXLPLERRPCITYLXCII 602
RQEG+D Y+++ V G + YQ+ +R G + +P + + I+
Sbjct: 162 RQEGLDPKEYYSRLVGGAHLRGQDISAGVYQE-----IRDLGGTGVIALKPVVRVMTTIL 216
Query: 603 XGAVECEL 626
CEL
Sbjct: 217 MTTARCEL 224
>SB_37336| Best HMM Match : Peptidase_S7 (HMM E-Value=2.7)
Length = 481
Score = 28.3 bits (60), Expect = 5.7
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +1
Query: 178 WIRSKIPFCILRMGVICLK 234
WIR+++ F +LR ++CL+
Sbjct: 132 WIRARVSFALLRSALVCLR 150
>SB_27882| Best HMM Match : Cob_adeno_trans (HMM E-Value=3.6)
Length = 822
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +3
Query: 423 RQEGVDTNWYFAKSVNVMTSDGVSVQCRTYQQTINPPLRKNGEXLPLERRPCITYLXCII 602
RQEG+D Y+++ V G + YQ+ +R G + +P + + I+
Sbjct: 162 RQEGLDPKEYYSRLVGGAHLRGQDISAGVYQE-----IRDLGGTGVIALKPVVRVMTTIL 216
Query: 603 XGAVECEL 626
CEL
Sbjct: 217 MTTARCEL 224
>SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2956
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -1
Query: 475 ITFTDLAKYQFVSTPSCLSNDGKS*SCSLHIAPQTWACSVGIIVADAPLQC 323
I + + ++Y FV + +N G S C L +T AC+ G+ ++ C
Sbjct: 1856 IRYYNQSRYNFVESQCSQNNGGCSDLCLLRPHSRTCACATGVPLSPDEKTC 1906
>SB_13192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +3
Query: 189 KDTFLYFA---YGSNLFKKRIRINNPTA-EFLGVGRLDNHQLXFIKYSEHWRGASATIIP 356
K FL F YG+ F + + + EF + ++ ++ +K EH + ++
Sbjct: 36 KAVFLLFESWIYGTGTFGRVLLARDRRGGEFYALKIMNISEVIRLKQVEHVQNEKNILMS 95
Query: 357 TEHAHVWGAIWRLHDQ 404
EH + +W HDQ
Sbjct: 96 IEHPFIVNLLWTQHDQ 111
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,081,988
Number of Sequences: 59808
Number of extensions: 336298
Number of successful extensions: 537
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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