Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F12
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   3.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   3.6  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    24   4.8  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   6.3  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   8.4  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   8.4  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = -1

Query: 526 LIVC*YVRH*TETPSEVITFTDLAKYQFVSTPSCLSNDGK-S*SCSLH 386
           L  C Y  + T T + +  FT+ A  +   +PS LS  G    SC +H
Sbjct: 377 LHACFYPYYSTTTLNRIARFTNRAPSKEDLSPSSLSGTGPFGGSCQIH 424


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = -1

Query: 526 LIVC*YVRH*TETPSEVITFTDLAKYQFVSTPSCLSNDGK-S*SCSLH 386
           L  C Y  + T T + +  FT+ A  +   +PS LS  G    SC +H
Sbjct: 377 LHACFYPYYSTTTLNRIARFTNRAPSKEDLSPSSLSGTGPFGGSCQIH 424


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 496 TETPSEVITFTDLAKYQFV 440
           TE P E +TF ++A   FV
Sbjct: 281 TENPEEALTFNEVAAQAFV 299


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 405 LDHVVSILLPKHGHVQW 355
           L+H+VS L P+H  + W
Sbjct: 379 LEHIVSDLFPQHPPLVW 395


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
 Frame = -3

Query: 266  LSCWIVDTDT--FFKQI 222
            LSCW++D D    FKQ+
Sbjct: 1070 LSCWVLDADARPTFKQL 1086


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 476 HNIYRFSKIPVCINTFLSV 420
           HN+YR + I   I+TF S+
Sbjct: 356 HNVYRDATIVTSIDTFTSL 374


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,157
Number of Sequences: 2352
Number of extensions: 12151
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)