Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F12
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28928-6|AAA68338.1|  188|Caenorhabditis elegans Hypothetical pr...    92   3e-19
AC025715-3|AAU87815.1|  534|Caenorhabditis elegans Hypothetical ...    29   3.8  
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr...    28   5.0  
M77697-3|AAA27898.3|  616|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF047656-12|AAC05111.1|  168|Caenorhabditis elegans Hypothetical...    27   8.7  

>U28928-6|AAA68338.1|  188|Caenorhabditis elegans Hypothetical
           protein C44B7.7 protein.
          Length = 188

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 62/151 (41%), Positives = 79/151 (52%)
 Frame = +3

Query: 198 FLYFAYGSNLFKKRIRINNPTAEFLGVGRLDNHQLXFIKYSEHWRGASATIIPTEHAHVW 377
           F YFA+GSNL   RIR     AE+   G+LDN +L F  YSE W+GA ATI   E   VW
Sbjct: 24  FYYFAFGSNLLGDRIRYRQKGAEYDCNGKLDNFRLEFANYSERWQGALATIKEAEGKEVW 83

Query: 378 GAIWRLHDQDLPSLDRQEGVDTNWYFAKSVNVMTSDGVSVQCRTYQQTINPPLRKNGEXL 557
           G +W++ ++   SLD QE      Y    V V T  GV + CRTYQ +    L+ +    
Sbjct: 84  GCVWKMPNEYSDSLDEQE----FGYHRLMVPVQTPKGV-ITCRTYQFS---DLKAD---- 131

Query: 558 PLERRPCITYLXCIIXGAVECELPEYYIEXL 650
           P+   P   Y   I  GA E +LP  YI+ L
Sbjct: 132 PMAPSP--HYKLVITEGAKENKLPADYIQKL 160


>AC025715-3|AAU87815.1|  534|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.5 protein.
          Length = 534

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = +3

Query: 408 LPSLDRQEGVDTNWYFAKSVNVMTSDGVSVQCRTYQQTINPPLRKNGEXLPLERRPCITY 587
           +P   + +GVD  W+    +       V V       TI+ PL       P++R  CI Y
Sbjct: 51  MPPQPQYDGVDRGWFMTLDLLAALPLSVFVLTNYVPNTIDRPLLLTYLNDPVKRHLCIGY 110

Query: 588 L 590
           L
Sbjct: 111 L 111


>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical protein
            F21H12.6 protein.
          Length = 1374

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 19/78 (24%), Positives = 33/78 (42%)
 Frame = +3

Query: 264  EFLGVGRLDNHQLXFIKYSEHWRGASATIIPTEHAHVWGAIWRLHDQDLPSLDRQEGVDT 443
            +F G   L N ++     +        TI+PT  + + G    L D DL  +D+ E +  
Sbjct: 992  KFAGKALLPNQEMTVYAMNIADDKLPKTIVPTSGSFLAGTFSALKDSDLSDVDKSEVI-- 1049

Query: 444  NWYFAKSVNVMTSDGVSV 497
              YF    +   + G+S+
Sbjct: 1050 --YFLSEYSTRPTKGLSM 1065


>M77697-3|AAA27898.3|  616|Caenorhabditis elegans Hypothetical
           protein B0303.4 protein.
          Length = 616

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 438 DTNWYFAKSVNVMT-SDGVSVQCRTYQQTINPPLRKNGEXLPLERRP 575
           D+ +  A ++ ++   D  S+  RTY+  + PP  ++G     E RP
Sbjct: 144 DSQYAAAAAIAILARGDDASLMSRTYRPQLRPPTERSGNTRVDESRP 190


>AF047656-12|AAC05111.1|  168|Caenorhabditis elegans Hypothetical
           protein F17E9.2 protein.
          Length = 168

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 463 DLAKYQFVSTPSCLSNDGKS 404
           D+ K+ F  T SC+SN G S
Sbjct: 21  DVTKFHFTGTLSCISNSGSS 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,117,563
Number of Sequences: 27780
Number of extensions: 269059
Number of successful extensions: 447
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)