Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F10
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061090-1|AAL28638.1|   90|Drosophila melanogaster LD07775p pro...   176   2e-44
AF218862-1|AAF31702.1|   90|Drosophila melanogaster Smt3 protein.     176   2e-44
AF053083-1|AAD19219.1|   90|Drosophila melanogaster ubiquitin-li...   176   2e-44
AE014134-1209|AAF52470.1|   90|Drosophila melanogaster CG4494-PA...   176   2e-44
AY075378-1|AAL68219.1|  163|Drosophila melanogaster LD08233p pro...    30   3.1  
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P...    30   3.1  
AY118950-1|AAM50810.1|  422|Drosophila melanogaster LD33701p pro...    29   5.5  
AE014297-3299|AAF56116.2|  424|Drosophila melanogaster CG4449-PA...    29   5.5  
BT003801-1|AAO41484.1|  504|Drosophila melanogaster AT23571p pro...    29   7.2  
AJ294538-1|CAC82378.1|  660|Drosophila melanogaster Lasp protein...    29   7.2  
AE014296-2785|AAN11739.2|  657|Drosophila melanogaster CG3849-PB...    29   7.2  
AE014296-2784|AAF49426.3|  504|Drosophila melanogaster CG3849-PA...    29   7.2  

>AY061090-1|AAL28638.1|   90|Drosophila melanogaster LD07775p
           protein.
          Length = 90

 Score =  176 bits (428), Expect = 2e-44
 Identities = 83/88 (94%), Positives = 85/88 (96%), Gaps = 1/88 (1%)
 Frame = +3

Query: 120 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 296
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 297 PINXNDTPTSLEMEEGDTIEVYQQQTGG 380
           PIN NDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AF218862-1|AAF31702.1|   90|Drosophila melanogaster Smt3 protein.
          Length = 90

 Score =  176 bits (428), Expect = 2e-44
 Identities = 83/88 (94%), Positives = 85/88 (96%), Gaps = 1/88 (1%)
 Frame = +3

Query: 120 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 296
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 297 PINXNDTPTSLEMEEGDTIEVYQQQTGG 380
           PIN NDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AF053083-1|AAD19219.1|   90|Drosophila melanogaster ubiquitin-like
           protein SMT3 protein.
          Length = 90

 Score =  176 bits (428), Expect = 2e-44
 Identities = 83/88 (94%), Positives = 85/88 (96%), Gaps = 1/88 (1%)
 Frame = +3

Query: 120 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 296
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 297 PINXNDTPTSLEMEEGDTIEVYQQQTGG 380
           PIN NDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AE014134-1209|AAF52470.1|   90|Drosophila melanogaster CG4494-PA
           protein.
          Length = 90

 Score =  176 bits (428), Expect = 2e-44
 Identities = 83/88 (94%), Positives = 85/88 (96%), Gaps = 1/88 (1%)
 Frame = +3

Query: 120 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 296
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 297 PINXNDTPTSLEMEEGDTIEVYQQQTGG 380
           PIN NDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AY075378-1|AAL68219.1|  163|Drosophila melanogaster LD08233p
           protein.
          Length = 163

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -1

Query: 149 FVFSLLFISHFEINVVLETINTKL*IDKLIWYLFSQTNA*MTACAMA 9
           F+ + L   HFE+  VL   +      K++W+L  ++N  + A  +A
Sbjct: 88  FIVAALCFYHFELVFVLRVTSRGSSTSKVLWFLIGESNRTLAALVLA 134


>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
            isoform A protein.
          Length = 2190

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 17/73 (23%), Positives = 34/73 (46%)
 Frame = -2

Query: 628  EVTYSIWYTYNLPYHKLFETHNALRSSAMLLCVTKLLPNTFTDTNDVSLKLT*G*SLRRV 449
            ++ YS+    N+       T +   SS  +   T +  +TF+ T  +++  T   S R +
Sbjct: 1737 DLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREI 1796

Query: 448  HLIDFDPLEMVNP 410
             +  F+ +E +NP
Sbjct: 1797 TVFQFNDVENINP 1809


>AY118950-1|AAM50810.1|  422|Drosophila melanogaster LD33701p
           protein.
          Length = 422

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +3

Query: 267 QVVRFRFDGQPINXNDTPTSLEMEEGDTIEV 359
           + ++  FDG  ++ NDTP + +ME  + I++
Sbjct: 388 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 418


>AE014297-3299|AAF56116.2|  424|Drosophila melanogaster CG4449-PA
           protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +3

Query: 267 QVVRFRFDGQPINXNDTPTSLEMEEGDTIEV 359
           + ++  FDG  ++ NDTP + +ME  + I++
Sbjct: 390 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 420


>BT003801-1|AAO41484.1|  504|Drosophila melanogaster AT23571p
           protein.
          Length = 504

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 314 HSNIT*DGRGRHNRGLPTADRRSVPSV 394
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 237 HSNINNNGHGSQNQMLPPQMRRSAASV 263


>AJ294538-1|CAC82378.1|  660|Drosophila melanogaster Lasp protein
           protein.
          Length = 660

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 314 HSNIT*DGRGRHNRGLPTADRRSVPSV 394
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 393 HSNINNNGHGSQNQMLPPQMRRSAASV 419


>AE014296-2785|AAN11739.2|  657|Drosophila melanogaster CG3849-PB,
           isoform B protein.
          Length = 657

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 314 HSNIT*DGRGRHNRGLPTADRRSVPSV 394
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 390 HSNINNNGHGSQNQMLPPQMRRSAASV 416


>AE014296-2784|AAF49426.3|  504|Drosophila melanogaster CG3849-PA,
           isoform A protein.
          Length = 504

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 314 HSNIT*DGRGRHNRGLPTADRRSVPSV 394
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 237 HSNINNNGHGSQNQMLPPQMRRSAASV 263


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,559,130
Number of Sequences: 53049
Number of extensions: 495424
Number of successful extensions: 1005
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)