Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F06
         (653 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O18326 Cluster: Protein hunchback; n=1; Bombyx mori|Rep...   258   8e-68
UniRef50_A2QIY8 Cluster: Contig An04c0170, complete genome; n=1;...    36   1.1  
UniRef50_Q2GN21 Cluster: Putative uncharacterized protein; n=1; ...    34   2.6  
UniRef50_Q7SDE1 Cluster: Putative uncharacterized protein NCU020...    33   4.5  
UniRef50_Q4P292 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_A4R3Z2 Cluster: Putative uncharacterized protein; n=4; ...    33   6.0  
UniRef50_A1UD60 Cluster: Flavin reductase domain protein, FMN-bi...    33   7.9  
UniRef50_Q8TU18 Cluster: Predicted protein; n=3; Methanosarcina|...    33   7.9  

>UniRef50_O18326 Cluster: Protein hunchback; n=1; Bombyx mori|Rep:
           Protein hunchback - Bombyx mori (Silk moth)
          Length = 385

 Score =  258 bits (632), Expect = 8e-68
 Identities = 118/137 (86%), Positives = 120/137 (87%)
 Frame = +2

Query: 242 HSSHPQAWGPLLQPPTVKTEPMEDGSFSKEQTSGFYSEGFHXXXXXXXXXXXXXXXPRSV 421
           HSSHPQAWGPLLQPPTVKTEPM+DG+FSKEQTSGFYSEGFH               PRS 
Sbjct: 22  HSSHPQAWGPLLQPPTVKTEPMDDGNFSKEQTSGFYSEGFHSASPSSSSKDSNGHSPRSS 81

Query: 422 GSTREPSPFYDAMPLKAKANLGMHLDSFRNSLPYSLLTPPGFESRASDARDHSPSYESYS 601
           GSTREPSPFYDAMPLKAKANLGMHLDSFRNSLPYSLLTPPGFESRASDARDHSPSYESYS
Sbjct: 82  GSTREPSPFYDAMPLKAKANLGMHLDSFRNSLPYSLLTPPGFESRASDARDHSPSYESYS 141

Query: 602 PRTLAPPAHVSTPLGRS 652
           PRTLAPPAHVS PLGRS
Sbjct: 142 PRTLAPPAHVSHPLGRS 158


>UniRef50_A2QIY8 Cluster: Contig An04c0170, complete genome; n=1;
           Aspergillus niger|Rep: Contig An04c0170, complete genome
           - Aspergillus niger
          Length = 157

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 151 SCAVCNFISVTTKGEGMLSCASPXWHDARTPLLPPPSVG 267
           S A   FIS  T  E  +SC+SP  H  + P + PP  G
Sbjct: 91  SLAKARFISQLTNEECAISCSSPAMHSLQLPTMTPPDQG 129


>UniRef50_Q2GN21 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 691

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +2

Query: 245 SSHPQAWGPLLQPPTVKTEPMEDGSFSKEQTSGFYSE 355
           SS P A+G L   PT++T PM   + S    SG +SE
Sbjct: 180 SSFPSAYGSLTSGPTIETAPMSRRNSSMNDVSGQFSE 216


>UniRef50_Q7SDE1 Cluster: Putative uncharacterized protein
           NCU02057.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU02057.1 - Neurospora crassa
          Length = 1319

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +2

Query: 461 PLKAKANLGMH--LDSFRNSLPYSLLTPPGFESRASDARDHSPSYESYSPRTLAPPAHVS 634
           P+ AK   G    LD+     PYS+  PP   S + D+R  SPS+   SP  +A  +   
Sbjct: 224 PVGAKKLAGRRDVLDAAEKKYPYSINDPPSLTS-SRDSRSRSPSF-PLSPSAVAMSSSPF 281

Query: 635 TPLG 646
            PLG
Sbjct: 282 PPLG 285


>UniRef50_Q4P292 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 1853

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = +2

Query: 434 EPSPFYDAMPLKAKANLGMHL--DSFRNSLPYSLLTPPGFESRASDARDHSPSYESYSPR 607
           +P+P   A P  + +N    L  DS ++     L TPPG+ S  S    HSP+  S   R
Sbjct: 501 DPNPSASARPSPSFSNSASLLSTDSPKSPTGLGLSTPPGYPSATSYLAIHSPTASSRIHR 560

Query: 608 T--LAPP 622
           T  L PP
Sbjct: 561 TTKLPPP 567


>UniRef50_A4R3Z2 Cluster: Putative uncharacterized protein; n=4;
           Pezizomycotina|Rep: Putative uncharacterized protein -
           Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 636

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 18/66 (27%), Positives = 24/66 (36%)
 Frame = +2

Query: 311 DGSFSKEQTSGFYSEGFHXXXXXXXXXXXXXXXPRSVGSTREPSPFYDAMPLKAKANLGM 490
           DG+ +      F  EG H               PR V  T   +PF   +P K KA +  
Sbjct: 137 DGTRTTRPVMSFQPEGDHPNVTAANMHLLYGTLPREVVCTENLTPFLKLLPCKGKAGIAS 196

Query: 491 HLDSFR 508
            LD  +
Sbjct: 197 LLDGHK 202


>UniRef50_A1UD60 Cluster: Flavin reductase domain protein,
           FMN-binding; n=5; Actinomycetales|Rep: Flavin reductase
           domain protein, FMN-binding - Mycobacterium sp. (strain
           KMS)
          Length = 163

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 15/52 (28%), Positives = 30/52 (57%)
 Frame = +2

Query: 470 AKANLGMHLDSFRNSLPYSLLTPPGFESRASDARDHSPSYESYSPRTLAPPA 625
           A+A LG   D+FR+++  S+ TP    +   D R H  +  +++  +++PP+
Sbjct: 2   AQAQLGSLTDAFRDAMA-SVCTPVAVITAMDDTRPHGTTVSAFASLSMSPPS 52


>UniRef50_Q8TU18 Cluster: Predicted protein; n=3;
           Methanosarcina|Rep: Predicted protein - Methanosarcina
           acetivorans
          Length = 312

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 293 KTEPMEDGSFSKEQTSGFYSEGFH 364
           K  P+E G F+++  SGF  EGFH
Sbjct: 4   KAPPVETGGFNRQDCSGFLPEGFH 27


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,777,922
Number of Sequences: 1657284
Number of extensions: 12509000
Number of successful extensions: 35385
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35357
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)