Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F06
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069434-1|AAL39579.1|  589|Drosophila melanogaster LD14125p pro...    29   4.2  
AF145664-1|AAD38639.1|  793|Drosophila melanogaster BcDNA.GH1111...    29   4.2  
AE014296-861|AAF47911.2|  456|Drosophila melanogaster CG11350-PB...    29   4.2  
AE013599-555|AAF59160.1|  793|Drosophila melanogaster CG2910-PB,...    29   4.2  
AE013599-554|AAM68878.1|  793|Drosophila melanogaster CG2910-PA,...    29   4.2  

>AY069434-1|AAL39579.1|  589|Drosophila melanogaster LD14125p
           protein.
          Length = 589

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
 Frame = +2

Query: 485 GMHLDSFRNSL-PYSLLTPPGFESRASDARDHSPSYESYSPRTLAPPAH 628
           G+ LD  R  + PY    PP     A   RD+ P +  Y      PP H
Sbjct: 4   GVPLDHRRPPIDPYDRYGPPHMHPHAVHPRDYRPLHHDYPHPPRGPPLH 52


>AF145664-1|AAD38639.1|  793|Drosophila melanogaster BcDNA.GH11110
           protein.
          Length = 793

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
 Frame = +2

Query: 485 GMHLDSFRNSL-PYSLLTPPGFESRASDARDHSPSYESYSPRTLAPPAH 628
           G+ LD  R  + PY    PP     A   RD+ P +  Y      PP H
Sbjct: 208 GVPLDHRRPPIDPYDRYGPPHMHPHAVHPRDYRPLHHDYPHPPRGPPLH 256


>AE014296-861|AAF47911.2|  456|Drosophila melanogaster CG11350-PB
           protein.
          Length = 456

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +2

Query: 515 LPYSLLTPPGFESRASDARDHSPSYESYSPRTLAPPAHVSTPLGRS 652
           LP S   PPG  + ++    +S   +SYS    AP A  S P+  S
Sbjct: 20  LPSSQYLPPGRGAASAPVASYSAPSQSYSVEASAPVASYSAPVESS 65


>AE013599-555|AAF59160.1|  793|Drosophila melanogaster CG2910-PB,
           isoform B protein.
          Length = 793

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
 Frame = +2

Query: 485 GMHLDSFRNSL-PYSLLTPPGFESRASDARDHSPSYESYSPRTLAPPAH 628
           G+ LD  R  + PY    PP     A   RD+ P +  Y      PP H
Sbjct: 208 GVPLDHRRPPIDPYDRYGPPHMHPHAVHPRDYRPLHHDYPHPPRGPPLH 256


>AE013599-554|AAM68878.1|  793|Drosophila melanogaster CG2910-PA,
           isoform A protein.
          Length = 793

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
 Frame = +2

Query: 485 GMHLDSFRNSL-PYSLLTPPGFESRASDARDHSPSYESYSPRTLAPPAH 628
           G+ LD  R  + PY    PP     A   RD+ P +  Y      PP H
Sbjct: 208 GVPLDHRRPPIDPYDRYGPPHMHPHAVHPRDYRPLHHDYPHPPRGPPLH 256


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,579,871
Number of Sequences: 53049
Number of extensions: 586909
Number of successful extensions: 1935
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1935
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)