Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F06
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    24   1.1  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    24   1.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   1.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   1.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   1.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.4  

>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 530 LTPPGFESRASDARDHSPS 586
           LTP  F SRA+   D SPS
Sbjct: 404 LTPKRFHSRAASKEDLSPS 422


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 530 LTPPGFESRASDARDHSPS 586
           LTP  F SRA+   D SPS
Sbjct: 404 LTPKRFHSRAASKEDLSPS 422


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -1

Query: 290  LSVVVGADPTLGGGRSGVRASCQXGEAQLSIPSPFVVTLIKLHTAQDT 147
            +S V+G   +L G   G           LS+P+ FV  ++  H  Q T
Sbjct: 958  ISEVIGGAISLDGKPLGFPLDRPLSLGALSVPNIFVKDVLVFHQGQPT 1005


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 330 SFEKLPSSIGSVLTVGGCRSGPHAWGWEEW 241
           + +++ ++I  V  + G  S P   GW +W
Sbjct: 149 TLKRVLATIAGVWILSGAISSPPLAGWNDW 178


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 330 SFEKLPSSIGSVLTVGGCRSGPHAWGWEEW 241
           + +++ ++I  V  + G  S P   GW +W
Sbjct: 149 TLKRVLATIAGVWILSGAISSPPLAGWNDW 178


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 330 SFEKLPSSIGSVLTVGGCRSGPHAWGWEEW 241
           + +++ ++I  V  + G  S P   GW +W
Sbjct: 149 TLKRVLATIAGVWILSGAISSPPLAGWNDW 178


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -1

Query: 425 CRRCVENVRSSLYLKKRVTRCE 360
           C++CV N+ S+    ++VT+C+
Sbjct: 545 CQQCVGNLASNNDRIRQVTKCK 566


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -1

Query: 425 CRRCVENVRSSLYLKKRVTRCE 360
           C++CV N+ S+    ++VT+C+
Sbjct: 545 CQQCVGNLASNNDRIRQVTKCK 566


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -1

Query: 425 CRRCVENVRSSLYLKKRVTRCE 360
           C++CV N+ S+    ++VT+C+
Sbjct: 545 CQQCVGNLASNNDRIRQVTKCK 566


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,914
Number of Sequences: 438
Number of extensions: 3318
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)