Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F05
         (364 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_02_0115 - 11248021-11248101,11249017-11249118                       56   6e-09
05_03_0661 - 16726958-16726966,16727133-16727234                       56   9e-09
11_06_0526 - 24585161-24587119                                         28   2.6  
03_01_0124 + 971213-971341,971741-971769,971877-972078,972839-97...    27   3.4  
04_03_0153 + 11919769-11919880,11920190-11920488,11921909-119220...    27   4.5  
11_06_0626 - 25620409-25620706,25620814-25620943,25621034-256212...    26   7.9  
03_04_0132 + 17580131-17581054,17581488-17582036                       26   7.9  
02_05_0116 - 25976234-25976394,25976485-25976701,25977345-259774...    26   7.9  

>01_02_0115 - 11248021-11248101,11249017-11249118
          Length = 60

 Score = 56.4 bits (130), Expect = 6e-09
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = +1

Query: 52  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGHGSK 165
           MAKSKNHT HNQ+ KAH+NGIKKP++ R  ST G   K
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPK 38


>05_03_0661 - 16726958-16726966,16727133-16727234
          Length = 36

 Score = 56.0 bits (129), Expect = 9e-09
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +1

Query: 52  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLG 153
           MAKSKNHT HNQ+ KAH+NGIKKP++ R  ST G
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKG 34


>11_06_0526 - 24585161-24587119
          Length = 652

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 123 KEDQARIHPWXWIQNF 170
           KED AR+H W +I NF
Sbjct: 387 KEDTARVHSWRFIGNF 402


>03_01_0124 +
           971213-971341,971741-971769,971877-972078,972839-973081,
           973172-973273,973743-974180
          Length = 380

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -2

Query: 201 YPSCKTFDSVKNFGSMXKGGFVPGLPWLFDTISVSFAVLVMICMIL 64
           YP+   F S K    M  G F+PGL   +       AV+++I +IL
Sbjct: 110 YPAQIMFKSTKVLPVMIMGAFIPGLRRKYPFHEYISAVMLVIGLIL 155


>04_03_0153 +
           11919769-11919880,11920190-11920488,11921909-11922024,
           11922113-11922248,11922959-11923006,11924130-11924228,
           11924317-11924385,11924465-11924599,11924687-11924755,
           11925221-11925276,11925465-11925624,11926534-11926698,
           11927484-11927568,11927646-11927849,11928396-11928487,
           11928571-11928613,11930727-11930884,11931520-11931630,
           11931947-11932012,11933716-11933784,11934181-11934255,
           11934330-11934506,11934598-11934683,11936259-11936313,
           11936901-11936939,11938105-11938230,11938319-11938432,
           11939208-11939265,11939485-11939623,11939698-11939783,
           11939842-11940041
          Length = 1148

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 89  TAKLTEMVSKSQGRPGTNPPLXMDPKFLTESK 184
           T    EM+ +S+G P  N P  +  K LTES+
Sbjct: 505 TKSYLEMILESKGVPRLNTPPPISRKLLTESQ 536


>11_06_0626 -
           25620409-25620706,25620814-25620943,25621034-25621250,
           25621894-25622015,25622119-25622267,25622642-25622759,
           25622840-25623185
          Length = 459

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = -2

Query: 222 VAWLASG--YP--SCKTFDSVKNFGSMXKGGFVPG 130
           VA LA G  +P  S  T D+++N G +  GG  PG
Sbjct: 86  VALLAFGTSFPQISLATIDAIRNLGQLTAGGLGPG 120


>03_04_0132 + 17580131-17581054,17581488-17582036
          Length = 490

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 86  KTAKLTEMVSKSQGRPGTNPPLXMDPKFLTESKVLQE 196
           KTA+  E +    GR G    +  +P+FL E   +++
Sbjct: 116 KTAEAIEKILDHNGRDGVGFQILSNPEFLAEGTAIRD 152


>02_05_0116 -
           25976234-25976394,25976485-25976701,25977345-25977466,
           25977570-25977718,25978095-25978212,25978293-25978638
          Length = 370

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = -2

Query: 222 VAWLASG--YP--SCKTFDSVKNFGSMXKGGFVPG 130
           VA LA G  +P  S  T D+++N G +  GG  PG
Sbjct: 86  VALLAFGTSFPQISLATIDAIRNLGQLTAGGLGPG 120


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,051,987
Number of Sequences: 37544
Number of extensions: 112600
Number of successful extensions: 409
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)