Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_F05
(364 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.49
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.85
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 29 1.1
SB_40598| Best HMM Match : Stap_Strp_toxin (HMM E-Value=2.7) 29 1.1
SB_25197| Best HMM Match : TatC (HMM E-Value=1.8) 29 1.5
SB_33977| Best HMM Match : CUE (HMM E-Value=0.52) 27 3.4
SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.4
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07) 27 4.6
SB_51620| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0) 27 6.0
SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1) 27 6.0
SB_34| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_48996| Best HMM Match : ASC (HMM E-Value=7.1e-08) 26 8.0
SB_48994| Best HMM Match : ASC (HMM E-Value=1.3e-11) 26 8.0
SB_3761| Best HMM Match : Tom22 (HMM E-Value=0.14) 26 8.0
SB_3633| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.0
SB_3594| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.0
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1
Query: 94 KAHRNGIKKPRKTRHESTLG 153
K HRNGIKKPR R+ S G
Sbjct: 175 KWHRNGIKKPRTNRYPSLKG 194
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 29.5 bits (63), Expect = 0.85
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 49 KMAKSKNHTNHNQNRKAH-RNGIKKPRKTRHESTLGHGSKIFNGIKGFARRVT*SQPSNS 225
+ ++S+ + +++R++ R+ ++PR+ + + R + S
Sbjct: 208 RRSRSRTRRSRSRSRRSRSRSRDRRPRRRSRDRERSRERRSRRSRDKSRSREKSRERGGS 267
Query: 226 RGRLXEKLPEKQRPRNE 276
RGR EK PEKQR +++
Sbjct: 268 RGRSAEKSPEKQRDKSD 284
>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
Length = 413
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 49 KMAKSKNHTNHNQNRKAHRNGIKKPRKTRHEST 147
K AKSK NH ++ K R KK ++T +ST
Sbjct: 145 KNAKSKIKRNHGEDNKPKRISTKKRKRTDKDST 177
>SB_40598| Best HMM Match : Stap_Strp_toxin (HMM E-Value=2.7)
Length = 192
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 55 AKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGHGSKI 168
+K+ N TN NQ K P+KT ++T+ S +
Sbjct: 153 SKNNNQTNRNQGNTGITENTKSPKKTNIDATVPSDSSV 190
>SB_25197| Best HMM Match : TatC (HMM E-Value=1.8)
Length = 622
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 43 LIKMAKSKNHTNHNQNRKAH-RNGIKKPRKTRHESTLGHGSKI 168
LI KSK+H NHN+ + H + I K H+ T+ K+
Sbjct: 571 LIVYCKSKHHANHNKGCERHFEDDINKCGCRNHDHTIAQYYKL 613
>SB_33977| Best HMM Match : CUE (HMM E-Value=0.52)
Length = 1183
Score = 27.5 bits (58), Expect = 3.4
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +2
Query: 38 ENSSKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNP 145
E +W +R++ + + KL E + ++GR P
Sbjct: 1031 EKYREWHMKRVLPLFVQDTKLREKIENAEGRTSGGP 1066
>SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 41 NSSKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNPPLXMDPK 166
NS+ WQ+ I + + K EM S + R N DPK
Sbjct: 88 NSTSWQNINIHESLAKELARDEMQSNERRRAQANSEQKTDPK 129
>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
Length = 532
Score = 27.1 bits (57), Expect = 4.6
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 88 NRKAHRNGIKKPRKTRHESTLGHGSKIFNGIKGFARRVT*SQPS 219
NR+ N KPR RHE T +GSK N + + + S PS
Sbjct: 90 NRRGIVNLSPKPRTLRHEKT-SNGSKKGNSLPSQSTSLKSSNPS 132
>SB_51620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 52 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 141
+ S +HN + R GIK+PR+++ E
Sbjct: 342 LTTSPTMISHNNQQNDSRRGIKRPRRSQEE 371
>SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 352
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 40 KLIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHEST 147
K IK AK N+N RK G K+P++ R ++T
Sbjct: 86 KPIKKAKVSK-VNNNGRRKEKNRGQKRPKRCRPDTT 120
>SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1)
Length = 535
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +1
Query: 49 KMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGHGSKIF 171
K K K +H N NG+ P+K + + H K F
Sbjct: 92 KFKKIKKEGDHGNNNTEKPNGVSSPKKKKKKHHHKHEEKHF 132
>SB_34| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 64 KNHTN-HNQNRKAHRNGIKKPRKTRHESTLGHGSKIFN 174
+NH HN+NRK N I+K R+ +I N
Sbjct: 66 RNHKEPHNRNRKEPGNRIRKVEHNRNRKDYSRDERIHN 103
>SB_48996| Best HMM Match : ASC (HMM E-Value=7.1e-08)
Length = 294
Score = 26.2 bits (55), Expect = 8.0
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 94 CGFGYDLYDSLT 59
CGFGY LY S+T
Sbjct: 41 CGFGYQLYKSIT 52
>SB_48994| Best HMM Match : ASC (HMM E-Value=1.3e-11)
Length = 538
Score = 26.2 bits (55), Expect = 8.0
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 94 CGFGYDLYDSLT 59
CGFGY LY S+T
Sbjct: 41 CGFGYQLYKSIT 52
>SB_3761| Best HMM Match : Tom22 (HMM E-Value=0.14)
Length = 109
Score = 26.2 bits (55), Expect = 8.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 180 DSVKNFGSMXKGGFVPGLPWLFDTISVSFAVLVMICMIL 64
DSV+N S G V G WL++ + +L MIL
Sbjct: 22 DSVRNVASATGGYTVSGAKWLYNFTGKTIWILSTSFMIL 60
>SB_3633| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 26.2 bits (55), Expect = 8.0
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 35 IENSSKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNPPLXMDPKFLTESKVL 190
+E KW++ + Q + ++ K+ G P PP K + ESK L
Sbjct: 214 VEVKDKWENL-LSQAKRENSEFKRERGKTGGGPAPKPPSAATAKIIEESKTL 264
>SB_3594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 43 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRH 138
+I + + H +HN +R + N IK + RH
Sbjct: 114 VIGVVRHVRHDDHNLSRSHNNNAIKSRNQNRH 145
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,276,568
Number of Sequences: 59808
Number of extensions: 135192
Number of successful extensions: 397
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 570200590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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