Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_F05
(364 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82256-2|CAB05115.1| 62|Caenorhabditis elegans Hypothetical pr... 60 6e-10
AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical... 48 2e-06
AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical ... 46 1e-05
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 28 2.3
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 28 2.3
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 27 4.0
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 27 4.0
AC006679-13|AAL38965.1| 644|Caenorhabditis elegans Coelomocyte ... 27 4.0
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 26 7.0
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 26 7.0
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 26 7.0
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 26 7.0
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 26 7.0
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical pr... 26 7.0
AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger t... 26 7.0
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 26 7.0
>Z82256-2|CAB05115.1| 62|Caenorhabditis elegans Hypothetical
protein B0513.3 protein.
Length = 62
Score = 59.7 bits (138), Expect = 6e-10
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +1
Query: 52 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGHGSKIFNGIKGFARR 198
MAKSKNHTNHNQN+KAHRNGI KP+K S G +K ++ F+R+
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGITKPKKHIFLSMKGVDAKFIKNLR-FSRK 48
>AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical
protein Y47H9C.14 protein.
Length = 87
Score = 48.0 bits (109), Expect = 2e-06
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +1
Query: 58 KSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGHGSKIFNGIKGFAR 195
K +NHTNHN+N KAHRNGI KP+K S G + ++ F +
Sbjct: 14 KPENHTNHNRNNKAHRNGITKPKKHIFLSIEGSRRQFIKSLRFFRK 59
>AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical
protein Y37H9A.5 protein.
Length = 167
Score = 45.6 bits (103), Expect = 1e-05
Identities = 32/70 (45%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 58 KSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGHGSKIFNGIKGFARRVT*SQPSNSRGRL 237
KSKNHTNHNQN AHR GI KP KIF I+G +RR +P RL
Sbjct: 80 KSKNHTNHNQNNTAHRIGITKP-------------KIFLSIEG-SRRQVHQEPPLRGSRL 125
Query: 238 XE-KLPEKQR 264
+ K+P QR
Sbjct: 126 PQCKIPRLQR 135
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 5 LLVLSSDSKWIEN--SSKWQSQRIIQIITKTAKLTE 106
L +LS KW+ + S KWQ RI IT+ AK+T+
Sbjct: 271 LAILSKCGKWMTDSLSEKWQQHRI--QITEKAKMTK 304
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 5 LLVLSSDSKWIEN--SSKWQSQRIIQIITKTAKLTE 106
L +LS KW+ + S KWQ RI IT+ AK+T+
Sbjct: 271 LAILSKCGKWMTDSLSEKWQQHRI--QITEKAKMTK 304
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 27.1 bits (57), Expect = 4.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 112 YHFCELCGFGYDLYDSL 62
Y+FC++CGFG DS+
Sbjct: 1685 YYFCKVCGFGSTSADSV 1701
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 27.1 bits (57), Expect = 4.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 112 YHFCELCGFGYDLYDSL 62
Y+FC++CGFG DS+
Sbjct: 1685 YYFCKVCGFGSTSADSV 1701
>AC006679-13|AAL38965.1| 644|Caenorhabditis elegans Coelomocyte
uptake defective protein5, isoform b protein.
Length = 644
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = -2
Query: 186 TFDSVKNFGSMXKGGFVPGLPWLFDTISV---SFAVLVMICMIL*LC 55
T +V ++ ++ G + G+ W FDT+ + VL++ + L LC
Sbjct: 299 TLSTVVSYVNVCNGRIIKGVGWSFDTLLIGGTDIFVLILCILSLILC 345
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/40 (25%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 8 LVLSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQ 124
+ + S+ +++EN+ ++Q++ IIQ + ++TEM+ + +
Sbjct: 655 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQE 694
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/40 (25%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 8 LVLSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQ 124
+ + S+ +++EN+ ++Q++ IIQ + ++TEM+ + +
Sbjct: 723 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQE 762
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/40 (25%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 8 LVLSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQ 124
+ + S+ +++EN+ ++Q++ IIQ + ++TEM+ + +
Sbjct: 723 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQE 762
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/40 (25%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 8 LVLSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQ 124
+ + S+ +++EN+ ++Q++ IIQ + ++TEM+ + +
Sbjct: 723 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQE 762
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/40 (25%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 8 LVLSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQ 124
+ + S+ +++EN+ ++Q++ IIQ + ++TEM+ + +
Sbjct: 723 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQE 762
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/40 (25%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 8 LVLSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQ 124
+ + S+ +++EN+ ++Q++ IIQ + ++TEM+ + +
Sbjct: 723 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQE 762
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/40 (25%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 8 LVLSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQ 124
+ + S+ +++EN+ ++Q++ IIQ + ++TEM+ + +
Sbjct: 723 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQE 762
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/40 (25%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 8 LVLSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQ 124
+ + S+ +++EN+ ++Q++ IIQ + ++TEM+ + +
Sbjct: 281 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQE 320
>Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical
protein ZC504.3 protein.
Length = 668
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 91 RKAHRNGIKKPRKTRHESTLGHGSKIFNGIKG 186
+K HR+ +KK R+ RH + + G++G
Sbjct: 266 QKLHRDAMKKRREQRHREAVSKLPVYYPGLRG 297
>AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 781
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/40 (25%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 8 LVLSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQ 124
+ + S+ +++EN+ ++Q++ IIQ + ++TEM+ + +
Sbjct: 303 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQE 342
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/40 (25%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 8 LVLSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQ 124
+ + S+ +++EN+ ++Q++ IIQ + ++TEM+ + +
Sbjct: 655 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQE 694
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,095,051
Number of Sequences: 27780
Number of extensions: 99202
Number of successful extensions: 366
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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