Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F05
         (364 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    29   0.013
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   5.9  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    20   7.8  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    20   7.8  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    20   7.8  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 0.013
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +1

Query: 58  KSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGHGSKIFN 174
           +  NH NHN N+  H +        +H     H SK  N
Sbjct: 420 QDNNHYNHNHNQARHSSKSDNQNNNQHNDQAHHSSKSNN 458


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 43  LIKMAKSKNHTNHNQNRKAHRN 108
           LI   +  N  N N N+  H N
Sbjct: 577 LIMNTRCANSDNQNNNQNKHNN 598


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 113 SKSQGRPGTNPPLXMDPKFLTESKVLQEG*PEA 211
           +K +  PG N P+ +        ++ +E  PEA
Sbjct: 35  AKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEA 67


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 113 SKSQGRPGTNPPLXMDPKFLTESKVLQEG*PEA 211
           +K +  PG N P+ +        ++ +E  PEA
Sbjct: 7   AKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEA 39



 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 113 SKSQGRPGTNPPLXMDPKFLTESKVLQEG*PEA 211
           +K +  PG N P+ +        ++ +E  PEA
Sbjct: 147 AKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEA 179


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = +1

Query: 85  QNRKAHRNGIKKPRKTRHESTLGHGSKI 168
           Q ++ H NG   P  T         SKI
Sbjct: 123 QQQQQHNNGYASPMSTSSYDPYSPNSKI 150


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,601
Number of Sequences: 438
Number of extensions: 1376
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)