Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_E23
         (640 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047290-1|AAH47290.1|  180|Homo sapiens signal peptidase comple...   184   3e-46
AY359044-1|AAQ89403.1|  180|Homo sapiens signal peptidase protein.    184   3e-46
AK026302-1|BAB15437.1|  180|Homo sapiens protein ( Homo sapiens ...   184   3e-46

>BC047290-1|AAH47290.1|  180|Homo sapiens signal peptidase complex
           subunit 3 homolog (S. cerevisiae) protein.
          Length = 180

 Score =  184 bits (447), Expect = 3e-46
 Identities = 81/144 (56%), Positives = 105/144 (72%)
 Frame = +1

Query: 208 DYRTGAQMNTVKVXVKNVPDYGASXERNDLGFLTFDLKTDLSNLFNWNVKQLFLYLTAEY 387
           D     +++  ++ +KNV D+    ER+DLGF+TFD+  DL N+F+WNVKQLFLYL+AEY
Sbjct: 34  DRSVPVRLHVSRIMLKNVEDFTGPRERSDLGFITFDITADLENIFDWNVKQLFLYLSAEY 93

Query: 388 ITPSNELNXVVLWDKIILXGENAVLXFKNMNTKYYFWDDGNGLKGHSNVTLTLSWNIIPN 567
            T +N LN VVLWDKI+L G+N  L  K+M TKY+F+DDGNGLKG+ NVTLTLSWN++PN
Sbjct: 94  STKNNALNQVVLWDKIVLRGDNPKLLLKDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPN 153

Query: 568 AGLLPNIQALGQHSFKFPIXYTQT 639
           AG+LP +   G  S  FP  Y  T
Sbjct: 154 AGILPLVTGSGHVSVPFPDTYEIT 177



 Score = 30.3 bits (65), Expect = 6.0
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +2

Query: 107 MYSVLTRGNAILTYTLSVLACLTFLLF 187
           M +VL+R N++  ++LSV+A LTF  F
Sbjct: 1   MNTVLSRANSLFAFSLSVMAALTFGCF 27


>AY359044-1|AAQ89403.1|  180|Homo sapiens signal peptidase protein.
          Length = 180

 Score =  184 bits (447), Expect = 3e-46
 Identities = 81/144 (56%), Positives = 105/144 (72%)
 Frame = +1

Query: 208 DYRTGAQMNTVKVXVKNVPDYGASXERNDLGFLTFDLKTDLSNLFNWNVKQLFLYLTAEY 387
           D     +++  ++ +KNV D+    ER+DLGF+TFD+  DL N+F+WNVKQLFLYL+AEY
Sbjct: 34  DRSVPVRLHVSRIMLKNVEDFTGPRERSDLGFITFDITADLENIFDWNVKQLFLYLSAEY 93

Query: 388 ITPSNELNXVVLWDKIILXGENAVLXFKNMNTKYYFWDDGNGLKGHSNVTLTLSWNIIPN 567
            T +N LN VVLWDKI+L G+N  L  K+M TKY+F+DDGNGLKG+ NVTLTLSWN++PN
Sbjct: 94  STKNNALNQVVLWDKIVLRGDNPKLLLKDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPN 153

Query: 568 AGLLPNIQALGQHSFKFPIXYTQT 639
           AG+LP +   G  S  FP  Y  T
Sbjct: 154 AGILPLVTGSGHVSVPFPDTYEIT 177



 Score = 30.3 bits (65), Expect = 6.0
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +2

Query: 107 MYSVLTRGNAILTYTLSVLACLTFLLF 187
           M +VL+R N++  ++LSV+A LTF  F
Sbjct: 1   MNTVLSRANSLFAFSLSVMAALTFGCF 27


>AK026302-1|BAB15437.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22649 fis, clone HSI07332. ).
          Length = 180

 Score =  184 bits (447), Expect = 3e-46
 Identities = 81/144 (56%), Positives = 105/144 (72%)
 Frame = +1

Query: 208 DYRTGAQMNTVKVXVKNVPDYGASXERNDLGFLTFDLKTDLSNLFNWNVKQLFLYLTAEY 387
           D     +++  ++ +KNV D+    ER+DLGF+TFD+  DL N+F+WNVKQLFLYL+AEY
Sbjct: 34  DRSVPVRLHVSRIMLKNVEDFTGPRERSDLGFITFDITADLENIFDWNVKQLFLYLSAEY 93

Query: 388 ITPSNELNXVVLWDKIILXGENAVLXFKNMNTKYYFWDDGNGLKGHSNVTLTLSWNIIPN 567
            T +N LN VVLWDKI+L G+N  L  K+M TKY+F+DDGNGLKG+ NVTLTLSWN++PN
Sbjct: 94  STKNNALNQVVLWDKIVLRGDNPKLLLKDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPN 153

Query: 568 AGLLPNIQALGQHSFKFPIXYTQT 639
           AG+LP +   G  S  FP  Y  T
Sbjct: 154 AGILPLVTGSGHVSVPFPDTYEIT 177



 Score = 30.3 bits (65), Expect = 6.0
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +2

Query: 107 MYSVLTRGNAILTYTLSVLACLTFLLF 187
           M +VL+R N++  ++LSV+A LTF  F
Sbjct: 1   MNTVLSRANSLFAFSLSVMAALTFGCF 27


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,031,065
Number of Sequences: 237096
Number of extensions: 1486550
Number of successful extensions: 2974
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2974
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)