Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_E15
(620 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 213 1e-56
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 144 7e-36
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 142 4e-35
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 122 4e-29
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 113 1e-26
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 112 4e-26
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 103 2e-23
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 102 5e-23
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 79 7e-16
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 69 4e-13
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 66 5e-12
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 65 9e-12
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 65 9e-12
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 59 4e-10
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 55 7e-09
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 53 3e-08
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 53 3e-08
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 52 9e-08
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 45 1e-05
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 40 4e-04
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 39 7e-04
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 33 0.025
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 28 1.3
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 27 1.7
SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces po... 27 2.9
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 27 2.9
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 26 3.8
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 5.1
SPAPYUG7.04c |rpb9||DNA-directed RNA polymerase II complex subun... 25 6.7
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 25 6.7
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 25 8.8
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 25 8.8
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 213 bits (521), Expect = 1e-56
Identities = 100/121 (82%), Positives = 110/121 (90%)
Frame = +1
Query: 256 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQ 435
+EDEYDYLFK VLIGDSGVGKS+LL RFTRNEFN+ESKSTIGVEFATR+I +D K IKAQ
Sbjct: 3 QEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQ 62
Query: 436 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVG 615
IWDTAGQERYRAITSAYYRGAVGAL+VYDI K S+ NV RWL+ELR+HAD NI+IMLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVG 122
Query: 616 N 618
N
Sbjct: 123 N 123
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 144 bits (350), Expect = 7e-36
Identities = 65/117 (55%), Positives = 84/117 (71%)
Frame = +1
Query: 268 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDT 447
YDYL K++LIGDSGVGKS LL RF+ + F +TIG++F R+I +DGK IK QIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 448 AGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
AGQER+R IT+AYYRGA+G LL+YD+ S+ NV W + HA N+ +L+GN
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGN 122
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 142 bits (344), Expect = 4e-35
Identities = 66/118 (55%), Positives = 87/118 (73%)
Frame = +1
Query: 265 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWD 444
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+ ++GKT+K QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Query: 445 TAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
TAGQER+R ITS+YYRGA G ++VYD+ S+ NV +WL+E+ +A + +LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGN 121
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 122 bits (294), Expect = 4e-29
Identities = 57/124 (45%), Positives = 82/124 (66%), Gaps = 4/124 (3%)
Frame = +1
Query: 259 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXV----DGKTI 426
++ YDYL K+VL G SG GKS LL RF +N+++ + T+G++FA+R I V K I
Sbjct: 3 KESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRI 62
Query: 427 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIM 606
K QIWDTAGQE++R++ YYRGA GA+LVYD+ S+ + WL ++R A I ++
Sbjct: 63 KLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVV 122
Query: 607 LVGN 618
L G+
Sbjct: 123 LAGS 126
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 113 bits (273), Expect = 1e-26
Identities = 44/113 (38%), Positives = 83/113 (73%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQE 459
FK+V +G+ VGK+SL++RF ++F+ ++TIG++F ++++ ++ +T++ Q+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 460 RYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
R+R++ +Y R + A++VYDI H S+ N +W+ ++R +++I+LVGN
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGN 124
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 112 bits (269), Expect = 4e-26
Identities = 53/113 (46%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKT-IKAQIWDTAGQE 459
K+VL+GDS VGKSSL+ RF +++F+ +STIG F T+++ +D T +K +IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 460 RYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
RY+++ YYR A A++VYDI + S W++EL+ A I+I L GN
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGN 128
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 103 bits (247), Expect = 2e-23
Identities = 43/96 (44%), Positives = 69/96 (71%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
KVV++GDSGVGK+ L+++F +F+ E K+TIG +F T+ + VD K + Q+WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRE 570
++++ A+YRGA ++VY++ S+ +V W +E
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQE 105
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 102 bits (244), Expect = 5e-23
Identities = 41/99 (41%), Positives = 70/99 (70%)
Frame = +1
Query: 274 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAG 453
+L KV+++G+SGVGK+S+++++ +F+ + K+TIG +F T+ + VD K + Q+WDTAG
Sbjct: 7 HLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAG 66
Query: 454 QERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRE 570
QER++++ A+YRGA +LVYD+ S+ + W E
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDE 105
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 78.6 bits (185), Expect = 7e-16
Identities = 39/113 (34%), Positives = 61/113 (53%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQE 459
FK+VL+GD G GK++ + R EF + +T+GVE + I +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 460 RYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
+ + YY ++++D+ ++Y NV W R+L + NI I+L GN
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCE-NIPIVLCGN 121
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 69.3 bits (162), Expect = 4e-13
Identities = 31/98 (31%), Positives = 53/98 (54%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
KV +IGDS +GK+SL+ + + F+ ES T+GV F ++I + I IWD GQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELR 576
+ + AV L ++D+++ + ++ W R+ R
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQAR 109
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 65.7 bits (153), Expect = 5e-12
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQE 459
+K+V++GD GVGKS+L + ++ F E TI + + +DG+ + DTAGQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDVLDTAGQE 67
Query: 460 RYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNIL-IMLVGN 618
Y A+ Y R G LLVY+I S+ + + +++ D + ++LV N
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVAN 121
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 64.9 bits (151), Expect = 9e-12
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
K+V++GD GK+SLLS FT F E T+ + + VDGK+++ +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQLALWDTAGQEE 68
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDHADXNILIMLVG 615
Y + Y A L+ + I S NV +W+ E+ N+ +LVG
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLC-PNVPFILVG 119
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 64.9 bits (151), Expect = 9e-12
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
K+V++GD GK+SLL+ FT+ F + TI E I VDG +I+ +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTI-FENYIHDIFVDGNSIELSLWDTAGQEE 73
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDHADXNILIML 609
Y + S Y ++ + + S NV +WL E+ + L+++
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLV 123
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 59.3 bits (137), Expect = 4e-10
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
K+V++GD GK+ LL F++ F T+ + + VDG+ I+ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHIELALWDTAGQED 66
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDHADXNILIMLVG 615
Y + Y + L+ + + S NV +W+ E+ H N+ I+LVG
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVL-HFCSNLPILLVG 117
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 55.2 bits (127), Expect = 7e-09
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
++ ++G VGKSSL ++ N F TI F+ ++I G+ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXN-ILIMLVGN 618
Y + S + G G +LVY I S+ V ++ +H + I++VGN
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGN 119
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 53.2 bits (122), Expect = 3e-08
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
K+V++GD GK+ LL F++ F T+ + + VDG+ ++ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHVELALWDTAGQED 66
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDHADXNILIMLV 612
Y + Y + L+ + + S NV +W+ E+ H ++ I+LV
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVL-HFCSSLPILLV 116
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 53.2 bits (122), Expect = 3e-08
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATR-SIXVDGKTIKAQIWDTAGQE 459
K+V++GD G GK+ LL F+ F T+ + T + + K I+ +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 460 RYRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDHADXNILIMLVG 615
Y + Y + LL + I S NV +W E++ H I+LVG
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQ-HFCPRTPIVLVG 127
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 51.6 bits (118), Expect = 9e-08
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
K V++GD VGK+ LL +T N+F + T+ +A ++ + + ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDHADXNILIMLVG 615
Y + Y L+ + + S+ NV +W E+ H + ++VG
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHC-PGVPCLIVG 114
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 44.8 bits (101), Expect = 1e-05
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
+++++G GK+++L + N+ ++ + T+G T V K IK +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVET----VTYKNIKFNVWDVGGQDK 77
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWL-RELRDHADXNILIMLVGN 618
R + Y+ G G + V D A + L R + D + L++++ N
Sbjct: 78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLAN 130
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 39.5 bits (88), Expect = 4e-04
Identities = 27/97 (27%), Positives = 43/97 (44%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
+V+L+G GK+++L + N E T G F R++ V+G ++ IWD GQ+
Sbjct: 18 RVLLLGLDNAGKTTILKCLLNEDVN-EVSPTFG--FQIRTLEVEG--LRFTIWDIGGQKT 72
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLREL 573
R Y+ + V D L L+EL
Sbjct: 73 LRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQEL 109
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 38.7 bits (86), Expect = 7e-04
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
+++++G GK+++L + E + + TIG T V+ + I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVET----VEYRNISFTVWDVGGQDK 73
Query: 463 YRAITSAYYRGAVGALLVYD 522
R + Y++ G + V D
Sbjct: 74 IRPLWRHYFQNTQGIIFVVD 93
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 33.5 bits (73), Expect = 0.025
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
+VV+ GD GVGKSSL+S + E N+ S + + S + + DT
Sbjct: 5 RVVICGDQGVGKSSLISALIQ-EDNVTSIPKVFPIISIPSNPDSNDDVSLVLVDTQSDSN 63
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDHADXNILIMLVGN 618
R +A + A LVY + + SY V WL R N+ I+L N
Sbjct: 64 EREYLAAEIKKANVICLVY--SDNYSYERVSIFWLPYFRS-LGVNVPIVLCEN 113
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 265 EYDY-LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI--GVEF 390
+YD +F ++G GK++LLS F N N + +T+ VEF
Sbjct: 416 KYDRNVFLCFVVGSKSCGKTALLSSFINNNTNRLTPNTVVNSVEF 460
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 286 VVLIGDSGVGKSSLLSRFTRN 348
VV+ G SGVGKS+LL R ++
Sbjct: 21 VVVFGPSGVGKSTLLKRLLKD 41
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.5 bits (58), Expect = 1.7
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 386 STPMVDL--DSKLNSFLVKRDRRLLLPTPESPMS 291
ST M DL D +++ FL+ R++ +PT + P S
Sbjct: 219 STGMADLSKDDRISRFLILREQSKQIPTQQKPSS 252
>SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 433
Score = 26.6 bits (56), Expect = 2.9
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +1
Query: 148 VIFVSNIIFIYGHLDVSKLTDF*RRLKSSG*TKMGTREDEYDYLFKVVLIGDSGVGKSSL 327
+IF + + + V+KL +L S+G + E +YD KVV I SG KSSL
Sbjct: 259 IIFDPDCAYAFPPYPVTKLI----KLASTGYEYVCNVETDYDENSKVVSIPHSGPSKSSL 314
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 26.6 bits (56), Expect = 2.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 329 RRLLLPTPESPMSTTLNK*SYSSSLVPILVYPE 231
R L+ P+P S +STT+NK + S+ + PE
Sbjct: 6 RILITPSPLSDISTTINKPNVHPSMSLLKALPE 38
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 26.2 bits (55), Expect = 3.8
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 241 TKMGTREDEYDYL----FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFAT 396
+K G + + +D L +V IG VGKS+LLS T+ + +T EF T
Sbjct: 46 SKSGPKGEGFDVLKSGDARVAFIGFPSVGKSTLLSAITKTK-----SATASYEFTT 96
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSR-FTRNEFNLESKSTIG 381
F V+++G+SG GKS+L++ R+ + KS G
Sbjct: 96 FNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTG 130
>SPAPYUG7.04c |rpb9||DNA-directed RNA polymerase II complex subunit
Rpb9 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 113
Score = 25.4 bits (53), Expect = 6.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 153 YHRFIKRCTVLLTSLFNCDYFELKALSCTYRN 58
Y R K VL + NCDY E+ A S YR+
Sbjct: 15 YPREDKVDRVLRLACRNCDYSEIAATSKVYRH 46
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 286 VVLIGDSGVGKSSLLSRFTR-NEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAG 453
++++G+S +GK++ ++ F + N+ N K T+ ++ + I DT G
Sbjct: 121 LIVVGESSLGKTTFVNSFLQSNDTNFRPKKTMDFVEHKATLSDGDQKFNLTIVDTPG 177
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.0 bits (52), Expect = 8.8
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -1
Query: 371 DLDSKLNSFLVKRDRRLLLPTPESPMSTTLNK*SYSSSLVPILVYPELFSRR 216
DL+SKL F RD+ L + T LN S+ S + L PE S +
Sbjct: 276 DLESKLYRFEEYRDKVATLELENEKIQTELN--SWKSLITNELPTPEAVSNK 325
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 25.0 bits (52), Expect = 8.8
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = -1
Query: 374 VDLDSKLNSFLVKRDRRLLLPTPESPM-STTLNK*SYSSSLVPILVYPELF--SRRQKSV 204
VD KL+++ + R++ L P+ S LNK +YS+ P+ ++ +L+ +RR K +
Sbjct: 66 VDGSEKLHAYSFTQ-RKISLAKNLIPLFSVDLNKDTYSALKAPLKIWSKLWEDNRRLKKI 124
Query: 203 SFETS 189
TS
Sbjct: 125 IKYTS 129
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,197,356
Number of Sequences: 5004
Number of extensions: 41279
Number of successful extensions: 169
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -