Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_E11
         (381 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GGP3 Cluster: Hybrid nonribosomal peptide synthetase ...    35   0.59 
UniRef50_Q0RI59 Cluster: Non-ribosomal peptide synthetase; n=3; ...    32   3.2  
UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;...    32   3.2  
UniRef50_Q63MA9 Cluster: Family S58 unassigned peptidase; n=40; ...    31   5.5  
UniRef50_Q1D8F1 Cluster: D-aminopeptidase; n=5; Bacteria|Rep: D-...    31   5.5  
UniRef50_A4I4B2 Cluster: Putative uncharacterized protein; n=3; ...    31   7.3  
UniRef50_Q9F5J4 Cluster: SimH; n=5; Streptomyces|Rep: SimH - Str...    31   9.6  
UniRef50_Q0HPV3 Cluster: MATE efflux family protein; n=12; Shewa...    31   9.6  

>UniRef50_Q8GGP3 Cluster: Hybrid nonribosomal peptide synthetase /
            polyketide synthase; n=12; root|Rep: Hybrid nonribosomal
            peptide synthetase / polyketide synthase - Streptomyces
            atroolivaceus
          Length = 4437

 Score = 34.7 bits (76), Expect = 0.59
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 99   RDDGCGGRNISLYLVARKGGSPTARSSR 182
            R+DGCG R +  YLVA  G +P+ R  R
Sbjct: 1416 REDGCGDRTLVAYLVALPGSAPSGRELR 1443


>UniRef50_Q0RI59 Cluster: Non-ribosomal peptide synthetase; n=3;
           cellular organisms|Rep: Non-ribosomal peptide synthetase
           - Frankia alni (strain ACN14a)
          Length = 1531

 Score = 32.3 bits (70), Expect = 3.2
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 99  RDDGCGGRNISLYLVARKGGSPTARSSRRESAXIVXXH 212
           R DG GGR ++ YLV   G  P A + R  +A  +  H
Sbjct: 877 RTDGPGGRYLAAYLVLADGAQPDAAALRAHAAATLPDH 914


>UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;
           n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn
           finger-containing protein - Dictyostelium discoideum AX4
          Length = 774

 Score = 32.3 bits (70), Expect = 3.2
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -1

Query: 237 NKIIFPLHYVXXLXSPIRALSSVRWGNLPFLPPS-KEKCSDRHNRH 103
           NK + P  Y     SP+   S+   GNL FL  S  ++  D HN H
Sbjct: 689 NKSVLPSIYSSMQSSPLSTSSTTSKGNLSFLVSSNNDEDDDHHNHH 734


>UniRef50_Q63MA9 Cluster: Family S58 unassigned peptidase; n=40;
           Bacteria|Rep: Family S58 unassigned peptidase -
           Burkholderia pseudomallei (Pseudomonas pseudomallei)
          Length = 376

 Score = 31.5 bits (68), Expect = 5.5
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 167 GGGTSLSCHQVKRNVPTATTVIAPSA 90
           GGGT + CH+ K  + TA+ ++A +A
Sbjct: 168 GGGTGMICHEFKGGIGTASRIVAEAA 193


>UniRef50_Q1D8F1 Cluster: D-aminopeptidase; n=5; Bacteria|Rep:
           D-aminopeptidase - Myxococcus xanthus (strain DK 1622)
          Length = 419

 Score = 31.5 bits (68), Expect = 5.5
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 167 GGGTSLSCHQVKRNVPTATTVIAPSAIALAADVLLPC 57
           GGGT + CH  K  + TA+  +  S       VLL C
Sbjct: 198 GGGTGMVCHSFKAGIGTASRKLPESEGGYTVGVLLQC 234


>UniRef50_A4I4B2 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania infantum
          Length = 578

 Score = 31.1 bits (67), Expect = 7.3
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -2

Query: 173 PCGGGTSLSCHQVKRNVPTATTVIAPSAIALAADVLLPCELEFLVIAKWQ 24
           PCG    L+CH      P   TV  P A   +  V  PC  ++L  ++W+
Sbjct: 323 PCGHLCWLTCHDETPCAPCKETVTVPCACG-SRHVSCPCFCQYLPESEWE 371


>UniRef50_Q9F5J4 Cluster: SimH; n=5; Streptomyces|Rep: SimH -
           Streptomyces antibioticus
          Length = 997

 Score = 30.7 bits (66), Expect = 9.6
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 99  RDDGCGGRNISLYLVARKGGSPTARSSRRES 191
           R+DG GGR I ++L+   G +PT    R  +
Sbjct: 835 REDGAGGRRIVVHLIPSAGAAPTMAELREHA 865


>UniRef50_Q0HPV3 Cluster: MATE efflux family protein; n=12;
           Shewanella|Rep: MATE efflux family protein - Shewanella
           sp. (strain MR-7)
          Length = 456

 Score = 30.7 bits (66), Expect = 9.6
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 37  MTKNSNSQGSNTSAANAIALGAMTVVAVGTFLFTWWQEREVPPPHGAQ 180
           MT +    G NT AANA+ L  + ++A       ++ E EV   +G Q
Sbjct: 267 MTFHGAGLGDNTVAANAVLLNLLLLIAYALDGIAYYAEAEVGKAYGQQ 314


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,767,463
Number of Sequences: 1657284
Number of extensions: 5033967
Number of successful extensions: 13261
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13261
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14868845845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)