Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_E10
(655 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 196 3e-49
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 195 9e-49
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 190 3e-47
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 159 4e-38
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 158 1e-37
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 155 1e-36
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 154 2e-36
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 152 8e-36
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 150 3e-35
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 149 4e-35
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 146 4e-34
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 141 1e-32
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 141 1e-32
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 138 8e-32
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 136 3e-31
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 129 7e-29
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 129 7e-29
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 128 9e-29
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 127 3e-28
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 124 2e-27
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 122 8e-27
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 119 7e-26
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 119 7e-26
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 119 7e-26
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 119 7e-26
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 115 9e-25
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 114 2e-24
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 113 5e-24
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 111 1e-23
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 105 9e-22
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 105 1e-21
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 103 5e-21
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 91 3e-17
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 91 3e-17
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 86 8e-16
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 84 3e-15
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 82 1e-14
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 75 1e-12
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 73 6e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 70 4e-11
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 69 1e-10
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 68 2e-10
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 66 5e-10
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 65 1e-09
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 65 1e-09
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 63 6e-09
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 62 1e-08
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 60 6e-08
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 59 8e-08
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 58 2e-07
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 56 6e-07
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 56 7e-07
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 56 7e-07
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 56 1e-06
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 56 1e-06
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 55 2e-06
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 54 2e-06
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 54 4e-06
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 53 5e-06
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 52 9e-06
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 52 1e-05
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 52 2e-05
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 51 3e-05
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 50 4e-05
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 50 4e-05
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 50 6e-05
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 49 9e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 3e-04
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 47 3e-04
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 47 5e-04
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 47 5e-04
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 45 0.001
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 45 0.002
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 43 0.007
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 42 0.010
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 41 0.023
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 41 0.023
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 41 0.030
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.039
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 40 0.069
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 39 0.12
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 38 0.21
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 38 0.21
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 37 0.49
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 36 0.64
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 36 0.85
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 36 1.1
UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1; Boha... 36 1.1
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 36 1.1
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 35 1.5
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 35 2.0
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 34 2.6
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 33 4.5
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 7.9
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 196 bits (479), Expect = 3e-49
Identities = 109/201 (54%), Positives = 127/201 (63%)
Frame = -3
Query: 653 KNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXX 474
K +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I +R
Sbjct: 15 KKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTA 74
Query: 473 XXIDEIPAKCSEKIARXTDLPXCAILDESGG*TVHPVPAPFXTIXLEINNIREGGRSQNL 294
I+E PAKC+EKI TD P CAI SGG TVHPVP P TI L + ++EGG +QNL
Sbjct: 75 PKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNL 134
Query: 293 ILFIRGNAISGAXSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SSPINDPGFPN 114
+LFIRGNA+SGA ++ GTNQFPNPP KA AVT+ L I S PI PG PN
Sbjct: 135 MLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLPGCPN 193
Query: 113 SARIKSLKDVPIIPDQIPKNK 51
SARIKSL DVP +P PK K
Sbjct: 194 SARIKSLSDVPTMPAHAPKMK 214
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 195 bits (475), Expect = 9e-49
Identities = 107/182 (58%), Positives = 113/182 (62%)
Frame = +1
Query: 109 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
AELG PGSLIGDDQIYNTIVTAHA N LVPL+L APD+AFPR+N
Sbjct: 36 AELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMN 95
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSX 468
N+ F IV NGAGTG TVYPPLSSNIAH G SV LAIFSLHLAGISS
Sbjct: 96 NMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSI 155
Query: 469 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 648
SFDQ+PLFV AVGITAF AGAIT+LLTDRNLNTS
Sbjct: 156 LGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTS 215
Query: 649 FF 654
FF
Sbjct: 216 FF 217
Score = 40.7 bits (91), Expect = 0.030
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3
Query: 3 RK*IYSTNHKDIGTLYFIF 59
RK +YSTNHKDIGTLYFIF
Sbjct: 1 RKWLYSTNHKDIGTLYFIF 19
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 190 bits (462), Expect = 3e-47
Identities = 103/181 (56%), Positives = 111/181 (61%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
ELG PGSLIGDDQIYNTIVTAHA N L+PL+L APD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXX 471
+ F IV NGAGTG TVYPPLSSNIAH G SV LAIFSLHLAGISS
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 651
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSF
Sbjct: 133 GAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSF 192
Query: 652 F 654
F
Sbjct: 193 F 193
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 159 bits (387), Expect = 4e-38
Identities = 91/182 (50%), Positives = 103/182 (56%)
Frame = +1
Query: 109 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
AELG PG+L+GDDQIYN IVTAHA N LVPL++ APD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSX 468
N+ F V GAGTG TVYPPL+ N+AH G SV LAIFSLHLAGISS
Sbjct: 100 NMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSI 159
Query: 469 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 648
S Q PLFV +V ITA A IT+LLTDRNLNT+
Sbjct: 160 LGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTT 219
Query: 649 FF 654
FF
Sbjct: 220 FF 221
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 12 IYSTNHKDIGTLYFIF 59
++STNHKDIGTLY IF
Sbjct: 8 LFSTNHKDIGTLYLIF 23
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 158 bits (383), Expect = 1e-37
Identities = 87/181 (48%), Positives = 100/181 (55%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
ELG PGS IG+DQ+YN +VTAHA N LVPL+L APD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXX 471
+ F V +GAGTG TVYPPLS N AH G SV LAIFSLHLAG+SS
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSIL 142
Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 651
+ + LFV +V ITA AGAIT+LLTDRN NTSF
Sbjct: 143 GAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSF 202
Query: 652 F 654
F
Sbjct: 203 F 203
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 155 bits (375), Expect = 1e-36
Identities = 87/182 (47%), Positives = 100/182 (54%)
Frame = +1
Query: 109 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
AEL PG+L+GDDQIYN IVTAHA N LVPL++ APD+AFPR+N
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSX 468
N+ F V GAGTG TVYPPL+ N+AH G SV L IFSLHLAG+SS
Sbjct: 99 NMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSI 158
Query: 469 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 648
S Q PLFV AV +TA A IT+LLTDRNLNT+
Sbjct: 159 LGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTT 218
Query: 649 FF 654
FF
Sbjct: 219 FF 220
Score = 33.1 bits (72), Expect = 6.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 15 YSTNHKDIGTLYFIF 59
+STNHKDIGTLY +F
Sbjct: 8 FSTNHKDIGTLYLVF 22
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 154 bits (374), Expect = 2e-36
Identities = 87/182 (47%), Positives = 100/182 (54%)
Frame = +1
Query: 109 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
AEL PG+L+GDDQIYN IVTAHA N L+PL++ APD+AFPR+N
Sbjct: 28 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMN 87
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSX 468
N+ F + GAGTG TVYPPL+ N+AH G SV L IFSLHLAGISS
Sbjct: 88 NMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSI 147
Query: 469 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 648
S Q PLFV AV ITA A IT+LLTDRNLNT+
Sbjct: 148 LGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTT 207
Query: 649 FF 654
FF
Sbjct: 208 FF 209
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 152 bits (368), Expect = 8e-36
Identities = 85/182 (46%), Positives = 100/182 (54%)
Frame = +1
Query: 109 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
AEL PG+L+GDDQIYN IVTAHA N LVPL++ APD+AFPR+N
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSX 468
N+ F V GAGTG TVYPPL+ N+AH G SV L IFSLHLAG+SS
Sbjct: 99 NMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSI 158
Query: 469 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 648
+ Q PLFV +V +TA A IT+LLTDRNLNT+
Sbjct: 159 LGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTT 218
Query: 649 FF 654
FF
Sbjct: 219 FF 220
Score = 33.1 bits (72), Expect = 6.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 15 YSTNHKDIGTLYFIF 59
+STNHKDIGTLY +F
Sbjct: 8 FSTNHKDIGTLYLVF 22
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 150 bits (363), Expect = 3e-35
Identities = 82/181 (45%), Positives = 100/181 (55%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
EL +PGS++GDD +YN IVTAHA N VPL++ APD+AFPR+NN
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXX 471
I F +V GAGTG TVYPPL+S AH G SV +AIFSLHLAG+SS
Sbjct: 101 ISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSIL 160
Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 651
+ ++PLFV +V ITA AGAIT+LLTDR NT+F
Sbjct: 161 GAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTF 220
Query: 652 F 654
F
Sbjct: 221 F 221
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 149 bits (362), Expect = 4e-35
Identities = 84/182 (46%), Positives = 100/182 (54%)
Frame = +1
Query: 109 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
AELG PG+L+G+D IYN IVTAHA N LVPL++ APD+AFPR+N
Sbjct: 39 AELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSX 468
N+ F +V GAGTG TVYPPL+ N +H G SV L IFSLHLAG+SS
Sbjct: 99 NMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSI 158
Query: 469 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 648
+ Q PLFV +V ITA A IT+LLTDRNLNT+
Sbjct: 159 LGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTT 218
Query: 649 FF 654
FF
Sbjct: 219 FF 220
Score = 33.5 bits (73), Expect = 4.5
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 12 IYSTNHKDIGTLYFIF 59
++STNHKDIGTLY +F
Sbjct: 7 LFSTNHKDIGTLYLLF 22
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 146 bits (354), Expect = 4e-34
Identities = 81/181 (44%), Positives = 99/181 (54%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
ELG PGSLIG+DQIYN+IVT+HA N L+PL+L +PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXX 471
+ F + G GTG TVYPPLS + H G SV L IFSLHLAG SS
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143
Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 651
+ D++ LF +V ITA AGAIT+LLTDRN+NTSF
Sbjct: 144 GAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSF 203
Query: 652 F 654
F
Sbjct: 204 F 204
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 141 bits (342), Expect = 1e-32
Identities = 82/183 (44%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
Frame = +1
Query: 112 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL PG L GD Q+YN I+TAHA N LVP+++ APD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
NNI F V GAGTG TVYPPLS +H G SV LAIFSLHL+GISS
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
Query: 466 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 645
+ +LPLFV A+ +TA AGAIT+LLTDRN NT
Sbjct: 158 MLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNT 217
Query: 646 SFF 654
SF+
Sbjct: 218 SFY 220
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 141 bits (342), Expect = 1e-32
Identities = 82/183 (44%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
Frame = +1
Query: 112 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL PG L GD Q+YN I+TAHA N LVP+++ APD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
NNI F V GAGTG TVYPPLS +H G SV LAIFSLHL+GISS
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
Query: 466 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 645
+ +LPLFV A+ +TA AGAIT+LLTDRN NT
Sbjct: 158 MLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNT 217
Query: 646 SFF 654
SF+
Sbjct: 218 SFY 220
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 138 bits (335), Expect = 8e-32
Identities = 77/183 (42%), Positives = 98/183 (53%), Gaps = 2/183 (1%)
Frame = +1
Query: 112 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL PG I G+ Q+YN ++TAHA N VP+++ APD+AFPR+
Sbjct: 41 ELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRL 100
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
NNI F +V G+GTG TVYPPLS +H G +V LAIFSLHL+G+SS
Sbjct: 101 NNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSS 160
Query: 466 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 645
+ +LPLFV +V +TAF AGAIT+LLTDRN NT
Sbjct: 161 ILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNT 220
Query: 646 SFF 654
+FF
Sbjct: 221 TFF 223
Score = 36.7 bits (81), Expect = 0.49
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 12 IYSTNHKDIGTLYFIF 59
++STNHKDIGTLYFIF
Sbjct: 8 LFSTNHKDIGTLYFIF 23
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 136 bits (330), Expect = 3e-31
Identities = 77/183 (42%), Positives = 99/183 (54%), Gaps = 2/183 (1%)
Frame = +1
Query: 112 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL P + L+G+ QIYN ++TAHA N LVP+++ +PD+AFPR+
Sbjct: 46 ELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRL 105
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
NNI F +V G GTG TVYPPLSS +H G +V LAIFSLH++G SS
Sbjct: 106 NNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASS 165
Query: 466 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 645
S ++PLFV ++ +TAF AGAIT+LLTDRN NT
Sbjct: 166 ILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNT 225
Query: 646 SFF 654
SFF
Sbjct: 226 SFF 228
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 12 IYSTNHKDIGTLYFIF 59
I+STNHKDIGTLY IF
Sbjct: 13 IFSTNHKDIGTLYLIF 28
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 129 bits (311), Expect = 7e-29
Identities = 77/183 (42%), Positives = 93/183 (50%), Gaps = 2/183 (1%)
Frame = +1
Query: 112 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL PGS L G+ Q++N +V HA N L+PL++ A D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
NNI F +V +GAGTG TVYPPLSS AH G SV LAIF+LHL ISS
Sbjct: 99 NNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISS 158
Query: 466 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 645
+ +LPLFV ++ ITAF + IT+LL DRN NT
Sbjct: 159 LLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNT 218
Query: 646 SFF 654
SFF
Sbjct: 219 SFF 221
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 129 bits (311), Expect = 7e-29
Identities = 77/183 (42%), Positives = 93/183 (50%), Gaps = 2/183 (1%)
Frame = +1
Query: 112 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL PGS L G+ Q++N +V HA N L+PL++ A D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
NNI F +V +GAGTG TVYPPLSS AH G SV LAIF+LHL ISS
Sbjct: 99 NNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISS 158
Query: 466 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 645
+ +LPLFV ++ ITAF + IT+LL DRN NT
Sbjct: 159 LLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNT 218
Query: 646 SFF 654
SFF
Sbjct: 219 SFF 221
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 128 bits (310), Expect = 9e-29
Identities = 76/183 (41%), Positives = 94/183 (51%), Gaps = 2/183 (1%)
Frame = +1
Query: 112 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL PGS L G+ Q++N +V HA N ++PL++ A D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
N+I F +V +GAGTG TVYPPLSS AH G SV LAIFSLHL ISS
Sbjct: 99 NSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISS 158
Query: 466 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 645
S ++PLFV A+ ITAF + IT+LL DRN NT
Sbjct: 159 LLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNT 218
Query: 646 SFF 654
SFF
Sbjct: 219 SFF 221
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 127 bits (306), Expect = 3e-28
Identities = 75/182 (41%), Positives = 90/182 (49%), Gaps = 1/182 (0%)
Frame = +1
Query: 112 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
EL PG I D+Q+YN+I+TAHA N L+PL L PD+ FPR+N
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSX 468
NI + + NG GTG T+YPPLS +H G SV LAIF LHL+GISS
Sbjct: 100 NISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSL 159
Query: 469 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 648
+L LF AV ITA AG IT++LTDRN NTS
Sbjct: 160 LGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTS 219
Query: 649 FF 654
FF
Sbjct: 220 FF 221
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 124 bits (298), Expect = 2e-27
Identities = 70/182 (38%), Positives = 90/182 (49%), Gaps = 1/182 (0%)
Frame = +1
Query: 112 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
EL PG I D+Q+YN+I+T+H N L+P+++ PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSX 468
N+ + I+ NG GTG T+YPPLS +H V L IF LHL+GISS
Sbjct: 126 NVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSL 185
Query: 469 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 648
+L LF AV ITA A AIT+LLTDRNLNTS
Sbjct: 186 LGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTS 245
Query: 649 FF 654
F+
Sbjct: 246 FY 247
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 122 bits (294), Expect = 8e-27
Identities = 72/183 (39%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Frame = +1
Query: 112 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL PG L G++Q++N +V HA N ++PL++ A D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
NNI F +V +GAGTG TVYPPL+S AH G SV LAIF+LH+ ISS
Sbjct: 99 NNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISS 158
Query: 466 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 645
+ +LPLFV A+ ITA + +T+LL DRN NT
Sbjct: 159 LLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNT 218
Query: 646 SFF 654
SFF
Sbjct: 219 SFF 221
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 119 bits (286), Expect = 7e-26
Identities = 65/178 (36%), Positives = 90/178 (50%)
Frame = +1
Query: 121 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRF 300
NP L+ + Q++N ++TAHA N LVPL + + D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 301 XXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXXXXX 480
++ G G+G T+YPPL+S +H G S+ +AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 481 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 119 bits (286), Expect = 7e-26
Identities = 65/178 (36%), Positives = 90/178 (50%)
Frame = +1
Query: 121 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRF 300
NP L+ + Q++N ++TAHA N LVPL + + D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 301 XXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXXXXX 480
++ G G+G T+YPPL+S +H G S+ +AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 481 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 119 bits (286), Expect = 7e-26
Identities = 65/178 (36%), Positives = 90/178 (50%)
Frame = +1
Query: 121 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRF 300
NP L+ + Q++N ++TAHA N LVPL + + D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 301 XXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXXXXX 480
++ G G+G T+YPPL+S +H G S+ +AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 481 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 119 bits (286), Expect = 7e-26
Identities = 65/178 (36%), Positives = 90/178 (50%)
Frame = +1
Query: 121 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRF 300
NP L+ + Q++N ++TAHA N LVPL + + D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 301 XXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXXXXX 480
++ G G+G T+YPPL+S +H G S+ +AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 481 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 115 bits (277), Expect = 9e-25
Identities = 69/183 (37%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Frame = +1
Query: 112 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL PG L G+ YN I T H N VP+++ APD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
NN F G GTG TVYPPLSS +H G SV L IFS HL GI S
Sbjct: 102 NNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Query: 466 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 645
LPLFV +V +T+F A AIT+LL DRN NT
Sbjct: 162 IVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNT 221
Query: 646 SFF 654
SF+
Sbjct: 222 SFY 224
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 114 bits (274), Expect = 2e-24
Identities = 69/167 (41%), Positives = 82/167 (49%), Gaps = 2/167 (1%)
Frame = +1
Query: 112 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL PG L GD Q+YN I+TAHA N LVP+++ APD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
NNI F V GAGTG TVYPPLS +H G SV LAIFSLHL+GISS
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
Query: 466 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 606
+ +LPLFV A+ +TA AG
Sbjct: 158 MLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 113 bits (271), Expect = 5e-24
Identities = 69/183 (37%), Positives = 88/183 (48%), Gaps = 2/183 (1%)
Frame = +1
Query: 112 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL N GS L G+ Q +N ++TAHA N L+PL+L A D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
NNI F +V GAGTG TVY PL+ +H G +V LAIFSLHL+G SS
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSS 163
Query: 466 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 645
++ +PLF AV TA A +T+ + DRN NT
Sbjct: 164 LLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNT 223
Query: 646 SFF 654
SFF
Sbjct: 224 SFF 226
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 111 bits (267), Expect = 1e-23
Identities = 66/136 (48%), Positives = 75/136 (55%)
Frame = +1
Query: 247 LILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVX 426
L L APD FPR N+ F V GAGTG TV PPLS+NIAH G SV
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 427 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 606
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 607 AITILLTDRNLNTSFF 654
AIT+LLTDRN+NTSFF
Sbjct: 124 AITMLLTDRNINTSFF 139
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 105 bits (252), Expect = 9e-22
Identities = 67/186 (36%), Positives = 87/186 (46%), Gaps = 5/186 (2%)
Frame = +1
Query: 112 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
EL PG I ++Q+YN+I+TAHA N L+PL++ PD+AFPR+N
Sbjct: 68 ELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPRLN 127
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TV----YPPLSSNIAHXGRSVXLAIFSLHLAG 456
NI F I+ G GTG T+ YPPLS +H G SV LAIF+LHL+G
Sbjct: 128 NISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSG 187
Query: 457 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 636
+SS +L LF + IT++LTDRN
Sbjct: 188 VSSLLGSINFITTVANMRTPGIKLHKLALF-------GWATWSSRSRYFLGITMVLTDRN 240
Query: 637 LNTSFF 654
NTSFF
Sbjct: 241 FNTSFF 246
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 105 bits (251), Expect = 1e-21
Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Frame = +1
Query: 109 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPR 282
A LG L G D ++N ++T H N +PL++ APD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 283 INNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGIS 462
+NN+ + ++ GAG G T YPP+S+ R+V AIF++H++G S
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262
Query: 463 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 642
S + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 263 SILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFG 322
Query: 643 TSFF 654
T+FF
Sbjct: 323 TTFF 326
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 103 bits (246), Expect = 5e-21
Identities = 62/172 (36%), Positives = 84/172 (48%), Gaps = 4/172 (2%)
Frame = +1
Query: 151 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXX 330
++N ++TAH N VP+++ APD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 331 XXRXIV----XNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXXXXXXXXXXX 498
V NGAGTG TVY PLS++ G +V +AI SLH+AG SS
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTI 211
Query: 499 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
+ ++PLFV +V +TAF A AIT+LLTDRN T+F+
Sbjct: 212 LNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFY 263
Score = 32.7 bits (71), Expect = 7.9
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 18 STNHKDIGTLYFIFXYL 68
STNHKDIGTLY IF +
Sbjct: 33 STNHKDIGTLYLIFAII 49
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 90.6 bits (215), Expect = 3e-17
Identities = 54/183 (29%), Positives = 77/183 (42%), Gaps = 2/183 (1%)
Frame = +1
Query: 112 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL +PG G Q+YN+++T H N ++PL+L AP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
N + F + G G+ T YPPLS S+ I LH GI S
Sbjct: 109 NALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGS 167
Query: 466 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 645
+ DQ+ +FV +T+F AG++ LL DRN NT
Sbjct: 168 LLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNT 227
Query: 646 SFF 654
SF+
Sbjct: 228 SFY 230
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 90.6 bits (215), Expect = 3e-17
Identities = 53/176 (30%), Positives = 73/176 (41%)
Frame = +1
Query: 127 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXX 306
G L GD Q YN ++T+H N +P++ PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 307 XXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXXXXXXX 486
+ G G G T+YP L H + +F++HL GISS
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINL 167
Query: 487 XXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
SF LF+ A ITA AG +T++L DRN NTSF+
Sbjct: 168 LGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFY 223
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 85.8 bits (203), Expect = 8e-16
Identities = 47/95 (49%), Positives = 55/95 (57%)
Frame = +1
Query: 109 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
AELG PG+L+GDDQ N IVTAHA N LVPL++ APD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLS 393
N+ F V GAGTG TVYPPL+
Sbjct: 100 NMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 83.8 bits (198), Expect = 3e-15
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
EL +PG + +Y++I+T HA N +PL++ D++ PR+NN
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXX 471
+ + G G G T+YPPLS++ G + LA+FSLH+AG+SS
Sbjct: 102 LSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIA 161
Query: 472 XXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 648
F L P+ + + T+ A +T+LL DR+ +TS
Sbjct: 162 GSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTS 221
Query: 649 FF 654
F+
Sbjct: 222 FY 223
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 81.8 bits (193), Expect = 1e-14
Identities = 49/118 (41%), Positives = 59/118 (50%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
ELG PGSL+ DDQ+YN +VTAH N LVPL+L APD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
+ F + G + PL G SV LAIF LHLAG+SS
Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 74.9 bits (176), Expect = 1e-12
Identities = 61/180 (33%), Positives = 72/180 (40%)
Frame = +1
Query: 115 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNI 294
L G +IG QI VTA A L PL + AP +A PR+ N+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 295 RFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXXX 474
F + G G VYPP SS +AH +V L IF LHLAGISS
Sbjct: 91 SFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLG 150
Query: 475 XXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
++ LF A AIT+L R N SFF
Sbjct: 151 SMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAAAITMLXXXRXXNXSFF 210
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = +1
Query: 247 LILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVX 426
L+L APD+AFPR+NN+ F +V NGAGTG TVYPPLSS AH G SV
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 427 LAIFS 441
LAI+S
Sbjct: 61 LAIYS 65
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +3
Query: 546 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 653
CM C +Y TCFS S+Y IIN K KY IF
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIF 132
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 70.1 bits (164), Expect = 4e-11
Identities = 38/83 (45%), Positives = 47/83 (56%)
Frame = +1
Query: 385 PLSSNIAHXGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 564
PL+S+IAH G SV +AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 565 TAFXXXXXXXXXAGAITILLTDR 633
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 36.7 bits (81), Expect = 0.49
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +3
Query: 219 WRIWKLIXXXXXXXXXXXIPTNK*YKILTPTPLPY 323
W IWKLI P NK YKILT PL Y
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTY 62
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 68.5 bits (160), Expect = 1e-10
Identities = 44/168 (26%), Positives = 64/168 (38%), Gaps = 1/168 (0%)
Frame = +1
Query: 154 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXX 333
Y I T H N L+PL++ A D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 334 XRXIVXNG-AGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXX 510
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 511 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
++ +LPL + + +TA A +LL DR+ T FF
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFF 253
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 67.7 bits (158), Expect = 2e-10
Identities = 48/177 (27%), Positives = 69/177 (38%)
Frame = +1
Query: 124 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFX 303
PG + D + YN ++T H N L+PL++ A D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 304 XXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXXXXXX 483
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 484 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
+F + LFV + AGA+T+L D+ L T+FF
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFF 176
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 66.5 bits (155), Expect = 5e-10
Identities = 41/99 (41%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +1
Query: 112 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL PG L GD Q+YN I+TAHA N LVP+++ APD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNI 402
NNI F V GAGTG TV LS I
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 65.3 bits (152), Expect = 1e-09
Identities = 51/181 (28%), Positives = 73/181 (40%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
+L P L D +YN VT H N L+P PD+ FPR+N
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXX 471
+ F ++ + A G T YPPLSS SV ++FSLHLAGI+S
Sbjct: 95 LSFWLMPFSLS-----LLLFSMASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLI 145
Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 651
+ L LF ++ + + A IT++LTD++L T F
Sbjct: 146 SSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCF 203
Query: 652 F 654
+
Sbjct: 204 Y 204
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 65.3 bits (152), Expect = 1e-09
Identities = 54/189 (28%), Positives = 76/189 (40%), Gaps = 8/189 (4%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
EL +PG + + YN+++T+H N L+PL++ A D+AFPRIN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 292 IRFXXXXXXXXXXXXRXIVXN---GAGTG*TVYPPLS-----SNIAHXGRSVXLAIFSLH 447
I F A TG T+Y PLS N A+ G V L + LH
Sbjct: 181 IAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQANAG--VDLMLLGLH 238
Query: 448 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 627
L+G+S+ S+ L +F + + AI +LL
Sbjct: 239 LSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQSGLILFAFPLLGSAIMMLLF 298
Query: 628 DRNLNTSFF 654
DRN TSFF
Sbjct: 299 DRNFGTSFF 307
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 62.9 bits (146), Expect = 6e-09
Identities = 40/169 (23%), Positives = 66/169 (39%)
Frame = +1
Query: 148 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXX 327
+IYN + T H N L P++L D+ +PR+N
Sbjct: 60 EIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVL 119
Query: 328 XXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXX 507
+ G+GTG T+YPPLS+++++ G + IF L AGI+S
Sbjct: 120 VVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSV 177
Query: 508 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
D++ ++ +T+F ++ DR+ NT FF
Sbjct: 178 KTIGFVIDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFF 226
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 62.1 bits (144), Expect = 1e-08
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 1/169 (0%)
Frame = +1
Query: 151 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXX 330
+YN I T H N +P++ +P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLV 117
Query: 331 XXRXIVXNGAGTG*TVYPPLSSNIAHXGR-SVXLAIFSLHLAGISSXXXXXXXXXXXXXX 507
G GTG T+YPPLS+++ +V + IF L ++G++S
Sbjct: 118 ILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHL 177
Query: 508 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
+ L + ++ IT+ G + +LL+D + NT FF
Sbjct: 178 RAKGLTLGILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFF 226
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 59.7 bits (138), Expect = 6e-08
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 2/170 (1%)
Frame = +1
Query: 151 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRF-XXXXXXXXX 327
IYN +T H N L+P+++ +++ PR+N I F
Sbjct: 63 IYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIF 122
Query: 328 XXXRXIVXNGAGTG*TVYPPLSSNIA-HXGRSVXLAIFSLHLAGISSXXXXXXXXXXXXX 504
++ +G T+YPPLS+ A + G ++ L++ +H+ GISS
Sbjct: 123 VISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKY 182
Query: 505 XXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
+F + ++ ++ +T+ AIT LL DRN+N++ +
Sbjct: 183 NRHVGLTFMNINIYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIY 232
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 59.3 bits (137), Expect = 8e-08
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +1
Query: 112 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL PG+ I G+ Q+YN ++TAHA N VP+++ +PD+AFPR+
Sbjct: 42 ELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRL 101
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 378
NNI F +V G G+G TV
Sbjct: 102 NNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 12 IYSTNHKDIGTLYFIF 59
++STNHKDIGTLY IF
Sbjct: 9 LFSTNHKDIGTLYLIF 24
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 58.0 bits (134), Expect = 2e-07
Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +1
Query: 112 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL N GS L G+ Q +N ++TAHA N L+PL+L A D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNI 402
NNI F +V GAGTG TV SS +
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 56.4 bits (130), Expect = 6e-07
Identities = 43/173 (24%), Positives = 66/173 (38%), Gaps = 4/173 (2%)
Frame = +1
Query: 148 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXX 327
+ Y +VT HA N L+PL++ A D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 328 XXXRXIV-XNGAGTG*TVYPPLS---SNIAHXGRSVXLAIFSLHLAGISSXXXXXXXXXX 495
+GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 496 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
+ +LPL + A+ ITA A ++L DR + T FF
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFF 258
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 56.0 bits (129), Expect = 7e-07
Identities = 43/181 (23%), Positives = 66/181 (36%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
+L P + +++N + T H N VPL++ A D+AFPR+N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXX 471
F + + G Y PLSS + V I L + GI S
Sbjct: 119 FGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWIIGLLIMGIGSVS 178
Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 651
S ++PLFV + + A A+ +LL DR L ++F
Sbjct: 179 GAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAF 238
Query: 652 F 654
F
Sbjct: 239 F 239
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 56.0 bits (129), Expect = 7e-07
Identities = 47/168 (27%), Positives = 63/168 (37%)
Frame = +1
Query: 151 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXX 330
+YN +VT H N +P+ L D+ PR+N++
Sbjct: 151 VYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYM 210
Query: 331 XXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXX 510
+ G G G T+YPPLS G V +FSLHLAG+SS
Sbjct: 211 ELS--LYYGCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRL 267
Query: 511 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
S + V A T+ A IT+LL DRN T+FF
Sbjct: 268 SFNCS-----IIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFF 310
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 55.6 bits (128), Expect = 1e-06
Identities = 46/176 (26%), Positives = 66/176 (37%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
EL PG I D YN T H N ++PL+L A D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNL 129
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXX 471
+ ++ G TG T Y P S AH +V +F + G SS
Sbjct: 130 LSLYIYLAGAVLALW-GMLNGGLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIGFSSIV 185
Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 639
++ ++PLFV A+ T+ G + +L+T NL
Sbjct: 186 TGINFIVTCHTMRAPGITWFKMPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENL 240
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 55.6 bits (128), Expect = 1e-06
Identities = 43/182 (23%), Positives = 62/182 (34%)
Frame = +1
Query: 109 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
A+L P + D YN I T H N +VPL + A D+AFP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSX 468
N+ F ++ G T Y PL+SN G + L +AGI +
Sbjct: 139 NLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAGIGTL 198
Query: 469 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 648
+ ++P+F IT A+ +L DR
Sbjct: 199 MTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAH 258
Query: 649 FF 654
FF
Sbjct: 259 FF 260
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 54.8 bits (126), Expect = 2e-06
Identities = 46/184 (25%), Positives = 68/184 (36%), Gaps = 3/184 (1%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
EL P + + D +YN + T H N L+P ++ APD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 292 IRFXXXXXXXXXXXXRXIVXNG-AGTG*TVYPPLS--SNIAHXGRSVXLAIFSLHLAGIS 462
F G A +G YPP+S + + H L I ++ L+GIS
Sbjct: 123 AAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGIS 182
Query: 463 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 642
S F ++P+FV G +LL D +
Sbjct: 183 SIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFG 242
Query: 643 TSFF 654
TSFF
Sbjct: 243 TSFF 246
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/41 (63%), Positives = 29/41 (70%)
Frame = +1
Query: 343 IVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
+V G G G TVYPPL+S + H G SV AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 53.6 bits (123), Expect = 4e-06
Identities = 43/183 (23%), Positives = 69/183 (37%), Gaps = 2/183 (1%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
EL + +YN ++T+H N +PL++ A D+AFPRIN
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 292 IRFXXXXXXXXXXXXRXIVXN--GAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
I F ++ A T T+Y PLS ++ +V + + LHL G+S+
Sbjct: 155 IAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTGVSA 212
Query: 466 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 645
+ L +F + + A+ +LL DRN T
Sbjct: 213 TMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQSGLILFAFPLFGSALIMLLLDRNFGT 272
Query: 646 SFF 654
+FF
Sbjct: 273 TFF 275
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 53.2 bits (122), Expect = 5e-06
Identities = 42/153 (27%), Positives = 58/153 (37%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
EL PG I D YN + T H N L+P+++ A D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXX 471
+ F +V GA TG T Y P S+ V L F L G SS
Sbjct: 123 LSFYVYLAGAVVALF-GMVQGGADTGWTFYTPYSTTTITKVVPVLLGAFIL---GFSSIL 178
Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 570
+ +LPLFV ++ T+
Sbjct: 179 TGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATS 211
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 52.4 bits (120), Expect = 9e-06
Identities = 48/181 (26%), Positives = 63/181 (34%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
EL P ++YN ++T H N L+PL++ D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXX 471
+ F V G T YPPLS G L I SL L G SS
Sbjct: 114 VAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGEE--LWILSLLLVGTSSIL 170
Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 651
+PLF A+ T+ A A+ +L D TSF
Sbjct: 171 GAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSF 230
Query: 652 F 654
F
Sbjct: 231 F 231
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 52.0 bits (119), Expect = 1e-05
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 1/142 (0%)
Frame = +1
Query: 232 N*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGA-GTG*TVYPPLSSNIAH 408
N +VPL + A D+AFPR+N + + +GA G T+Y PL++ I
Sbjct: 88 NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYT 147
Query: 409 XGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 588
G + LA ++ L +S + ++P+F ++ T
Sbjct: 148 PGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILMLWA 207
Query: 589 XXXXAGAITILLTDRNLNTSFF 654
+LL DRNL T FF
Sbjct: 208 FPPLMVGGALLLLDRNLGTEFF 229
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 112 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL PG+ L G+ Q++N +V HA N L+PL++ A D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 286 NNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 378
NNI F +V +GAGTG TV
Sbjct: 99 NNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 50.8 bits (116), Expect = 3e-05
Identities = 46/183 (25%), Positives = 68/183 (37%), Gaps = 2/183 (1%)
Frame = +1
Query: 112 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
EL G I DD +YNT + H N +PL++ A D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSX 468
+ + + T YPP S I H + FS+ L G +S
Sbjct: 102 ALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHG--NTAFYTFSVLLLGFASI 158
Query: 469 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRNLNT 645
+++L +FV A + AF G A+T+L D+ + T
Sbjct: 159 LGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGT 217
Query: 646 SFF 654
FF
Sbjct: 218 HFF 220
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 50.4 bits (115), Expect = 4e-05
Identities = 42/181 (23%), Positives = 62/181 (34%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
+LG P + +YN + T H N +VPL++ A D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLNA 117
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXX 471
+ V G Y PL+ V I + L G++S
Sbjct: 118 LSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTGVASIA 177
Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 651
+ +++PLFV + AF A LL DR+ T F
Sbjct: 178 GALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRF 237
Query: 652 F 654
F
Sbjct: 238 F 238
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 50.4 bits (115), Expect = 4e-05
Identities = 42/175 (24%), Positives = 66/175 (37%), Gaps = 4/175 (2%)
Frame = +1
Query: 142 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXX 321
+ + Y +VT H N L+PL + A D+A +N + +
Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157
Query: 322 XXXXXRXIVXNGAGTG*-TVYPPLSS---NIAHXGRSVXLAIFSLHLAGISSXXXXXXXX 489
+ G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYI 217
Query: 490 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
SF +LPL + A ITA A +L+ DR+L TSFF
Sbjct: 218 TTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFF 272
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 49.6 bits (113), Expect = 6e-05
Identities = 45/182 (24%), Positives = 65/182 (35%), Gaps = 1/182 (0%)
Frame = +1
Query: 112 ELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
+L P + IG D+ YN I T H LVPL++ IAFPR+N
Sbjct: 57 QLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMVGTRHIAFPRLN 114
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSX 468
+ V G G Y PLS G+ + + +S+
Sbjct: 115 AFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMITFTEVSAL 174
Query: 469 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 648
S D++PLFV ++ +T+F A T L+ DR + T
Sbjct: 175 AIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTH 234
Query: 649 FF 654
FF
Sbjct: 235 FF 236
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 49.2 bits (112), Expect = 9e-05
Identities = 34/123 (27%), Positives = 41/123 (33%)
Frame = +3
Query: 276 PTNK*YKILTPTPLPYIINFKXNCXKWCRNRMNSLPPTFI*YRTXRKIRXSCYFFTTFSX 455
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPTSCS 138
Query: 456 XXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRSK 635
CM +YS + S+YNI K
Sbjct: 139 SVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTSFSPSIGSSHYNITYWPK 198
Query: 636 LKY 644
KY
Sbjct: 199 PKY 201
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +3
Query: 549 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 653
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 47.2 bits (107), Expect = 3e-04
Identities = 40/167 (23%), Positives = 58/167 (34%)
Frame = +1
Query: 154 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXX 333
Y+ I TAH N +VPL + A D+AFP +N++ F
Sbjct: 100 YDQIFTAHGVIMIIFMAMPFMTGLM-NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVN 158
Query: 334 XRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXX 513
V N A TG YPPL+ V I++L ++GI +
Sbjct: 159 LSLGVGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRA 218
Query: 514 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
+P+F GA+ +L DR L+ FF
Sbjct: 219 PGMKLMDMPIFTWTCTWANVLIATSFPILTGALAMLALDRYLDFHFF 265
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 46.8 bits (106), Expect = 5e-04
Identities = 41/178 (23%), Positives = 62/178 (34%), Gaps = 1/178 (0%)
Frame = +1
Query: 109 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
AEL PG ++ +N + T H N ++PL + APD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGT-G*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISS 465
F + GA G T+Y PLS I G + I + GI S
Sbjct: 124 AFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWIVGVGATGIGS 183
Query: 466 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 639
+ ++P+F + + + A +L DR L
Sbjct: 184 VASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKL 241
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 46.8 bits (106), Expect = 5e-04
Identities = 40/182 (21%), Positives = 63/182 (34%), Gaps = 1/182 (0%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
+L P + + YN I+T H N +VPL+L A D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVNA 111
Query: 292 IRFXXXXXXXXXXXXRXIVXNGA-GTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSX 468
+ GA G T Y P S A V + ++ L G SS
Sbjct: 112 FSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAILLLGFSSL 168
Query: 469 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 648
S ++P++V +V + A ++L +R + S
Sbjct: 169 LGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLS 228
Query: 649 FF 654
+F
Sbjct: 229 WF 230
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 45.2 bits (102), Expect = 0.001
Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 1/142 (0%)
Frame = +1
Query: 232 N*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIV-XNGAGTG*TVYPPLSSNIAH 408
N LVP ++ APD+ +PRIN + F + +G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLSTISKS 145
Query: 409 XGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 588
G V L + + +AG SS + LF +V +
Sbjct: 146 IG--VDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 589 XXXXAGAITILLTDRNLNTSFF 654
A +LL +R+L FF
Sbjct: 204 LPPLAAGAIMLLLERHLGMHFF 225
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 44.8 bits (101), Expect = 0.002
Identities = 46/186 (24%), Positives = 66/186 (35%), Gaps = 5/186 (2%)
Frame = +1
Query: 112 ELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
+LG PG+ D Y +T H N L+PL++ A D+ FP +N
Sbjct: 66 QLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYVN 125
Query: 289 NIRFXXXXXXXXXXXXRXIVXNG-AGTG*TVYPP--LSSNIAHXGRSVXLAIFSLHLAGI 459
+ + V G G G T+YPP + S + L + SL L I
Sbjct: 126 MLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQDWGIVLMLSSLILFII 185
Query: 460 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXXXXXXXXXAGAITILLTDRN 636
+ +LPL V + T G++ +LL DR
Sbjct: 186 GFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPALFVGSVMLLL-DRL 244
Query: 637 LNTSFF 654
L TSFF
Sbjct: 245 LGTSFF 250
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 42.7 bits (96), Expect = 0.007
Identities = 34/181 (18%), Positives = 62/181 (34%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
+L P + Q YN ++T H N +VPL + A D++FP +N
Sbjct: 52 QLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIGARDVSFPFLNA 110
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXX 471
+ F + G T Y LS + G + + L ++G+ +
Sbjct: 111 LGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFVLGLQISGLGTLI 168
Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 651
++ +LPLF + + + +++ DR T+F
Sbjct: 169 AGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNF 228
Query: 652 F 654
F
Sbjct: 229 F 229
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 42.3 bits (95), Expect = 0.010
Identities = 38/167 (22%), Positives = 55/167 (32%)
Frame = +1
Query: 154 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXX 333
Y+ I TAH N VPL + A D+AFP +N++ F
Sbjct: 99 YDQIFTAHGVIMIIFMAMPFFTGLM-NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVN 157
Query: 334 XRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXX 513
V A TG YPPL+ G V I++L L+G+ +
Sbjct: 158 ISLGVGEFAKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRA 217
Query: 514 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
+P+F A+ +L DR L+ F
Sbjct: 218 PGMKLMDMPIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIF 264
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 41.1 bits (92), Expect = 0.023
Identities = 35/141 (24%), Positives = 49/141 (34%)
Frame = +1
Query: 232 N*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHX 411
N +VPL + A D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 412 GRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 591
G V I+SL LA + S +PLF TA
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 592 XXXAGAITILLTDRNLNTSFF 654
L DR L+ FF
Sbjct: 264 PPLTVVTLQLALDRYLDFHFF 284
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 41.1 bits (92), Expect = 0.023
Identities = 35/172 (20%), Positives = 56/172 (32%), Gaps = 3/172 (1%)
Frame = +1
Query: 148 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXX 327
+ Y + T HA N L+PL++ A D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 328 XXXRXIVXNGAGTG*TVYP---PLSSNIAHXGRSVXLAIFSLHLAGISSXXXXXXXXXXX 498
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 499 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
+F +LP+ + + ITA + + DR T FF
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFF 261
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 40.7 bits (91), Expect = 0.030
Identities = 38/181 (20%), Positives = 61/181 (33%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
+L P + + Y+++ T H N L PL+L + D+AFPR+
Sbjct: 77 QLARPNATVLTPAQYDSLFTMHGVTMIFLYALPVLSGFA-NYLWPLMLGSRDMAFPRLTA 135
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXX 471
+ + G Y PL+S G ++ + + L GIS+
Sbjct: 136 FSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANIDIYGLGMILLGISTTG 195
Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 651
S D+LP+ V + + A +L DRN T F
Sbjct: 196 GAANFVVTLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHF 255
Query: 652 F 654
F
Sbjct: 256 F 256
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 40.3 bits (90), Expect = 0.039
Identities = 28/78 (35%), Positives = 36/78 (46%)
Frame = +1
Query: 412 GRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 591
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 592 XXXAGAITILLTDRNLNT 645
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 39.5 bits (88), Expect = 0.069
Identities = 30/143 (20%), Positives = 52/143 (36%), Gaps = 2/143 (1%)
Frame = +1
Query: 232 N*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLS--SNIA 405
N LVPL + A D+AFPR+N + + G T+Y PL+ + I
Sbjct: 89 NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNTPAYIP 148
Query: 406 HXGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 585
G + +L + + +P+F ++ +T +
Sbjct: 149 GEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSINLTVWMMLF 208
Query: 586 XXXXXAGAITILLTDRNLNTSFF 654
A+ IL +D L T++F
Sbjct: 209 AFAALLAALMILASDHILGTTYF 231
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 38.7 bits (86), Expect = 0.12
Identities = 29/141 (20%), Positives = 52/141 (36%)
Frame = +1
Query: 232 N*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHX 411
N ++PL + + D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 412 GRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 591
V +S+ ++GI + F+++ +F+ +
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISF 238
Query: 592 XXXAGAITILLTDRNLNTSFF 654
+ + DR L+T F+
Sbjct: 239 PILTILLFQIFLDRTLSTHFY 259
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 37.9 bits (84), Expect = 0.21
Identities = 40/184 (21%), Positives = 66/184 (35%), Gaps = 5/184 (2%)
Frame = +1
Query: 118 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIR 297
G PG ++ + Y +++T H N +P+ + A D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 298 FXXXXXXXXXXXXRXIVXNGAG-TG*TVYPPLSS--NIAHXGRSVXLAIFSLHLA--GIS 462
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 463 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 642
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 643 TSFF 654
TSFF
Sbjct: 254 TSFF 257
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 37.9 bits (84), Expect = 0.21
Identities = 32/154 (20%), Positives = 52/154 (33%)
Frame = +1
Query: 109 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
A+L P S + YN + T H L+P +L + D+AFPR+
Sbjct: 56 AQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLLGSRDLAFPRLT 114
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSX 468
F + +G +YPPLSS + G + + + IS+
Sbjct: 115 AYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWLIGITFVEISAI 174
Query: 469 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 570
S ++P+F +TA
Sbjct: 175 AAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTA 208
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 36.7 bits (81), Expect = 0.49
Identities = 35/181 (19%), Positives = 59/181 (32%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
+L P + D + YN + + H ++PL+L D+ FPR+N
Sbjct: 64 QLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLMLGTRDMTFPRLNA 122
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXX 471
+ ++ G YPPL+ G + + IS+
Sbjct: 123 FGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYTTVVTFMEISALV 182
Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 651
S +++P+FV AV + +F A +L DR F
Sbjct: 183 AAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHF 242
Query: 652 F 654
F
Sbjct: 243 F 243
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 36.3 bits (80), Expect = 0.64
Identities = 33/140 (23%), Positives = 50/140 (35%), Gaps = 1/140 (0%)
Frame = +1
Query: 238 LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNG-AGTG*TVYPPLSSNIAHXG 414
L+PL + + D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 415 RSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 594
A ++ L GI + LPLFV AV A
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFP 230
Query: 595 XXAGAITILLTDRNLNTSFF 654
G +LL ++ S++
Sbjct: 231 EITGLFFLLLVGNLMHASYY 250
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 35.9 bits (79), Expect = 0.85
Identities = 37/185 (20%), Positives = 62/185 (33%), Gaps = 4/185 (2%)
Frame = +1
Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291
+L PG + + +N + T HA N +PL++ A D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLNA 115
Query: 292 IRFXXXXXXXXXXXXRXIVXNGAG----TG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGI 459
+ ++ G G Y L+S G L L GI
Sbjct: 116 FSYWIYLFGALFINAGWLMGTAGGHVPDIGWFGYANLTSVQFTSGLGPDFWTLGLLLLGI 175
Query: 460 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 639
+ + ++P+FV +T+ A+ +L+ DR
Sbjct: 176 GTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTF 235
Query: 640 NTSFF 654
+FF
Sbjct: 236 AANFF 240
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 35.5 bits (78), Expect = 1.1
Identities = 29/139 (20%), Positives = 49/139 (35%)
Frame = +1
Query: 238 LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGR 417
L+PL++ A D+ FPR+ + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 418 SVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 597
S + + LA I+S S ++P+ + + TAF
Sbjct: 184 SADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPP 243
Query: 598 XAGAITILLTDRNLNTSFF 654
+L +R L FF
Sbjct: 244 LIIGSILLEAERLLGLPFF 262
>UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1;
Bohadschia argus|Rep: Cytochrome oxidase subunit I -
Bohadschia argus
Length = 247
Score = 35.5 bits (78), Expect = 1.1
Identities = 22/76 (28%), Positives = 31/76 (40%)
Frame = +3
Query: 225 IWKLIXXXXXXXXXXXIPTNK*YKILTPTPLPYIINFKXNCXKWCRNRMNSLPPTFI*YR 404
+W L IP N+ ++L L + + K CRNRMN+LP
Sbjct: 28 LWNLTYTFNDSSPWYGIPPNEQNELLVSPSLFHSTPSISSSGKSCRNRMNNLPTLIQNNS 87
Query: 405 TXRKIRXSCYFFTTFS 452
R + YFF+T S
Sbjct: 88 PRRSVSSPRYFFSTSS 103
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 529 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
DQ+ LF ++ IT AG IT+LL+DRN N FF
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFF 53
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +1
Query: 112 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRI 285
EL +P S GD Y +VTAH N L+P + + D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 286 NNIRF 300
N+I F
Sbjct: 148 NSIGF 152
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 34.7 bits (76), Expect = 2.0
Identities = 27/146 (18%), Positives = 51/146 (34%)
Frame = +1
Query: 109 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288
A+L +P S + Y + T H L+P +L + D+A+PR++
Sbjct: 56 AQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKMLGSRDLAYPRLS 114
Query: 289 NIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSX 468
F + +G +YPPL+S + G + + + IS+
Sbjct: 115 AYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWLLGITFVEISAI 174
Query: 469 XXXXXXXXXXXXXXXXXXSFDQLPLF 546
S D++P++
Sbjct: 175 AAAVEIVVTVLRFRAPGMSLDRMPIY 200
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia
polymorpha (Liverwort)
Length = 802
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 12 IYSTNHKDIGTLYFIF 59
++STNHKDIGTLY IF
Sbjct: 9 LFSTNHKDIGTLYLIF 24
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 33.5 bits (73), Expect = 4.5
Identities = 32/167 (19%), Positives = 51/167 (30%)
Frame = +1
Query: 154 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXX 333
YN ++T HA N +PL L D+A PR+N
Sbjct: 74 YNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVV 133
Query: 334 XRXIVXNGAGTG*TVYPPLSSNIAHXGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXX 513
G T Y PL+ + G SV + ++ L G+ S
Sbjct: 134 LGLFNGGAPSVGWTFYYPLTMDGNQTGVSVFMV--AVILNGLGSLLGSANFAATIVNLRA 191
Query: 514 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 654
++P+F ++ T+ A + + L S F
Sbjct: 192 PGMGLWKMPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMF 238
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 632 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 510
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,177,513
Number of Sequences: 1657284
Number of extensions: 6198382
Number of successful extensions: 13953
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 12701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13770
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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