Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_E09
         (617 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   4.5  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        24   4.5  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   4.5  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -1

Query: 272 GLSSYELRNPCSVFYQHP*WSLD*ERRFLRNSPAPRTRHPTFVS 141
           G+    L NP ++ Y  P   LD   + LR S      HP + S
Sbjct: 375 GMPPANLFNPAALAYHDPAIYLDPRYQMLRASHHSAAGHPLYPS 418


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 242 TDYEVRMRTNLPVFKVKDSSVRRRYXDFE 328
           +D +V+ R  LP+ K   S  R  Y DF+
Sbjct: 512 SDAKVKGRPILPLLKTVQSYKREHYHDFK 540


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 553  RQELRARQDQEHITVHAAPSP 615
            RQ  R  +D + IT+H +P P
Sbjct: 1201 RQRQRRARDSQAITIHFSPLP 1221


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,149
Number of Sequences: 2352
Number of extensions: 9482
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)