Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_E09
         (617 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071431-1|AAL49053.1|  167|Drosophila melanogaster RE52028p pro...   258   6e-69
AE014297-1555|AAF54838.1|  167|Drosophila melanogaster CG6359-PA...   258   6e-69
AE014297-1556|AAN13550.1|  110|Drosophila melanogaster CG6359-PB...   175   5e-44
AY119129-1|AAM50989.1|  458|Drosophila melanogaster RE32163p pro...    40   0.003
AY069492-1|AAL39637.1|  449|Drosophila melanogaster LD22082p pro...    40   0.003
AE014134-1435|AAF52625.2|  449|Drosophila melanogaster CG8282-PA...    40   0.003
AE014134-602|AAF51109.1|  458|Drosophila melanogaster CG2774-PA ...    40   0.003
AY069705-1|AAL39850.1|  565|Drosophila melanogaster LD47602p pro...    31   0.94 
AF223381-1|AAF34701.1|  565|Drosophila melanogaster sorting nexi...    31   0.94 
AE014296-1715|AAF50219.2|  565|Drosophila melanogaster CG6757-PA...    31   0.94 

>AY071431-1|AAL49053.1|  167|Drosophila melanogaster RE52028p
           protein.
          Length = 167

 Score =  258 bits (631), Expect = 6e-69
 Identities = 122/154 (79%), Positives = 128/154 (83%)
 Frame = +2

Query: 128 RLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVR 307
           RLNVKKQTLDDAYA PANFLEIDV+NP+TTM  GKKRYTDYEVRMRTNLPVFKVK+SSVR
Sbjct: 14  RLNVKKQTLDDAYAVPANFLEIDVVNPLTTMAAGKKRYTDYEVRMRTNLPVFKVKESSVR 73

Query: 308 RRYXDFEWLXNELXRDSKIVVPPLPGKALKRQLPFRXXXXXXXXXXXXXXXKGLEVFINK 487
           RRY DFEWL NEL RDSKIVVPPLPGKA KRQ+PFR               KGLE FINK
Sbjct: 74  RRYSDFEWLRNELERDSKIVVPPLPGKAWKRQMPFRGDEGIFDESFIEERRKGLEAFINK 133

Query: 488 IAGHPLAXNERCLHMFLQEPTIDRSYVPGKIRNT 589
           IAGHPLA NERCLHMFLQE  ID++YVPGKIRNT
Sbjct: 134 IAGHPLAQNERCLHMFLQENVIDKNYVPGKIRNT 167


>AE014297-1555|AAF54838.1|  167|Drosophila melanogaster CG6359-PA,
           isoform A protein.
          Length = 167

 Score =  258 bits (631), Expect = 6e-69
 Identities = 122/154 (79%), Positives = 128/154 (83%)
 Frame = +2

Query: 128 RLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVR 307
           RLNVKKQTLDDAYA PANFLEIDV+NP+TTM  GKKRYTDYEVRMRTNLPVFKVK+SSVR
Sbjct: 14  RLNVKKQTLDDAYAVPANFLEIDVVNPLTTMAAGKKRYTDYEVRMRTNLPVFKVKESSVR 73

Query: 308 RRYXDFEWLXNELXRDSKIVVPPLPGKALKRQLPFRXXXXXXXXXXXXXXXKGLEVFINK 487
           RRY DFEWL NEL RDSKIVVPPLPGKA KRQ+PFR               KGLE FINK
Sbjct: 74  RRYSDFEWLRNELERDSKIVVPPLPGKAWKRQMPFRGDEGIFDESFIEERRKGLEAFINK 133

Query: 488 IAGHPLAXNERCLHMFLQEPTIDRSYVPGKIRNT 589
           IAGHPLA NERCLHMFLQE  ID++YVPGKIRNT
Sbjct: 134 IAGHPLAQNERCLHMFLQENVIDKNYVPGKIRNT 167


>AE014297-1556|AAN13550.1|  110|Drosophila melanogaster CG6359-PB,
           isoform B protein.
          Length = 110

 Score =  175 bits (425), Expect = 5e-44
 Identities = 83/110 (75%), Positives = 87/110 (79%)
 Frame = +2

Query: 260 MRTNLPVFKVKDSSVRRRYXDFEWLXNELXRDSKIVVPPLPGKALKRQLPFRXXXXXXXX 439
           MRTNLPVFKVK+SSVRRRY DFEWL NEL RDSKIVVPPLPGKA KRQ+PFR        
Sbjct: 1   MRTNLPVFKVKESSVRRRYSDFEWLRNELERDSKIVVPPLPGKAWKRQMPFRGDEGIFDE 60

Query: 440 XXXXXXXKGLEVFINKIAGHPLAXNERCLHMFLQEPTIDRSYVPGKIRNT 589
                  KGLE FINKIAGHPLA NERCLHMFLQE  ID++YVPGKIRNT
Sbjct: 61  SFIEERRKGLEAFINKIAGHPLAQNERCLHMFLQENVIDKNYVPGKIRNT 110


>AY119129-1|AAM50989.1|  458|Drosophila melanogaster RE32163p
           protein.
          Length = 458

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = +2

Query: 182 FLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYXDF----EWLXNELX 349
           F+ I V +P   +G G   Y  Y+V  +TN+P FK  + S  RR+ DF    + L  +  
Sbjct: 74  FISIVVSDP-QKIGDGMGSYLAYKVTTKTNIPKFKRSEFSTLRRFSDFLGIHDLLVGKYM 132

Query: 350 RDSKIVVPPLPGK 388
           R  +I +PP P K
Sbjct: 133 RLGRI-IPPAPSK 144


>AY069492-1|AAL39637.1|  449|Drosophila melanogaster LD22082p
           protein.
          Length = 449

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
 Frame = +2

Query: 155 DDAYAAPAN--FLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYXDFE 328
           D + +APA    L  + L+   +  + +K    + V  RT LP F  KD++V R++ +F 
Sbjct: 57  DSSSSAPATPAVLGENALHVEISDALSEKEKVKFTVHTRTTLPGFSKKDNNVVRQHEEFV 116

Query: 329 WLXNELXRD---SKIVVPPLP 382
           WL + +  +   +  ++PP P
Sbjct: 117 WLHDRIEENDDYAGYIIPPCP 137


>AE014134-1435|AAF52625.2|  449|Drosophila melanogaster CG8282-PA
           protein.
          Length = 449

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
 Frame = +2

Query: 155 DDAYAAPAN--FLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYXDFE 328
           D + +APA    L  + L+   +  + +K    + V  RT LP F  KD++V R++ +F 
Sbjct: 57  DSSSSAPATPAVLGENALHVEISDALSEKEKVKFTVHTRTTLPGFSKKDNNVVRQHEEFV 116

Query: 329 WLXNELXRD---SKIVVPPLP 382
           WL + +  +   +  ++PP P
Sbjct: 117 WLHDRIEENDDYAGYIIPPCP 137


>AE014134-602|AAF51109.1|  458|Drosophila melanogaster CG2774-PA
           protein.
          Length = 458

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = +2

Query: 182 FLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYXDF----EWLXNELX 349
           F+ I V +P   +G G   Y  Y+V  +TN+P FK  + S  RR+ DF    + L  +  
Sbjct: 74  FISIVVSDP-QKIGDGMGSYLAYKVTTKTNIPKFKRSEFSTLRRFSDFLGIHDLLVGKYM 132

Query: 350 RDSKIVVPPLPGK 388
           R  +I +PP P K
Sbjct: 133 RLGRI-IPPAPSK 144


>AY069705-1|AAL39850.1|  565|Drosophila melanogaster LD47602p
           protein.
          Length = 565

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 299 SVRRRYXDFEWLXNEL-XRDSKIVVPPLPGKAL 394
           SV RRY  F+WL   L  +   I VPPLP K +
Sbjct: 251 SVSRRYKHFDWLHERLVDKFCLIPVPPLPDKQI 283


>AF223381-1|AAF34701.1|  565|Drosophila melanogaster sorting nexin
           DSH3PX1 protein.
          Length = 565

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 299 SVRRRYXDFEWLXNEL-XRDSKIVVPPLPGKAL 394
           SV RRY  F+WL   L  +   I VPPLP K +
Sbjct: 251 SVSRRYKHFDWLHERLVDKFCLIPVPPLPDKQI 283


>AE014296-1715|AAF50219.2|  565|Drosophila melanogaster CG6757-PA
           protein.
          Length = 565

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 299 SVRRRYXDFEWLXNEL-XRDSKIVVPPLPGKAL 394
           SV RRY  F+WL   L  +   I VPPLP K +
Sbjct: 251 SVSRRYKHFDWLHERLVDKFCLIPVPPLPDKQI 283


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,456,905
Number of Sequences: 53049
Number of extensions: 429242
Number of successful extensions: 991
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)