Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_E04
(460 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 111 5e-24
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 107 1e-22
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 95 5e-19
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 95 9e-19
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 93 3e-18
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 91 1e-17
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 85 7e-16
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 81 1e-14
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 79 6e-14
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 78 8e-14
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 72 5e-12
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 67 1e-10
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 64 1e-09
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 64 1e-09
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 62 6e-09
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 61 1e-08
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 59 4e-08
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 59 4e-08
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 59 5e-08
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 52 5e-06
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 52 6e-06
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 48 7e-05
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 43 0.004
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 38 0.10
UniRef50_Q5B7I5 Cluster: Putative uncharacterized protein; n=1; ... 34 1.3
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 34 1.7
UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.2
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 33 3.0
UniRef50_Q2HYH7 Cluster: Helicase; n=1; Bacillus thuringiensis s... 33 3.9
UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protei... 33 3.9
UniRef50_A0LGL6 Cluster: Phospholipid/glycerol acyltransferase; ... 33 3.9
UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila melanogaste... 33 3.9
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 33 3.9
UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiell... 32 5.2
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe... 32 5.2
UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing ... 32 6.8
UniRef50_UPI0000D9DE6C Cluster: PREDICTED: similar to 60S riboso... 31 9.0
UniRef50_Q9A909 Cluster: Helicase, putative; n=3; Alphaproteobac... 31 9.0
UniRef50_Q0IMT6 Cluster: Os12g0542200 protein; n=2; Oryza sativa... 31 9.0
UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeb... 31 9.0
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 31 9.0
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 111 bits (268), Expect = 5e-24
Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 362
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 363 LRFNTRVRFEXRYKSGKNKWFFQKLXF 443
R +V+FE RYK+GKNKWFFQKL F
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 96.7 bits (230), Expect = 2e-19
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +2
Query: 41 MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
MGK MKPGKVVLVL+GRY+GRKA++V N D+GTSD+PY HA VAGIDRYPR+ GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 221 *NPQEVQDKAF 253
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 107 bits (257), Expect = 1e-22
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 362
P KV K MGK KI KR+K+KPF+KVV+Y HL+PTRY+VD +F+K + + LK P+K++K
Sbjct: 50 PLKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRK 109
Query: 363 LRFNTRVRFEXRYKSGKNKWFFQKLXF 443
+ +FE RYK+GKNKWFF KL F
Sbjct: 110 ALVEVKSKFEERYKTGKNKWFFTKLRF 136
Score = 89.0 bits (211), Expect = 4e-17
Identities = 40/60 (66%), Positives = 48/60 (80%)
Frame = +2
Query: 41 MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
MGKIMKPGKVVLVL G+YAGRKA+VV DEG SD+ Y HA +AGIDRYP + ++ GK+
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKK 60
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 95.5 bits (227), Expect = 5e-19
Identities = 43/87 (49%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 362
P KV K+ G K+ KR+KIKPF+KVVNYNHL+PTRYT+D K S + + P++R++
Sbjct: 50 PSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREE 109
Query: 363 LRFNTRVRFEXRYKSGKNKWFFQKLXF 443
+ + FE R+++GKN+WFF KL F
Sbjct: 110 AKKVVKKAFEERHQAGKNQWFFSKLRF 136
Score = 72.5 bits (170), Expect = 4e-12
Identities = 31/71 (43%), Positives = 47/71 (66%)
Frame = +2
Query: 41 MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
M K +K GKV +V+ GRYAG+K ++V +DEG+ P+GHA VAGI+RYP + ++ G +
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAK 60
Query: 221 *NPQEVQDKAF 253
+ + K F
Sbjct: 61 KVAKRTKIKPF 71
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 94.7 bits (225), Expect = 9e-19
Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 362
P KV KRMG KI KRSK+KPFVKV++YNHLMPTRY ++ K + K+P++R+
Sbjct: 104 PQKVTKRMGAKKIAKRSKVKPFVKVISYNHLMPTRYALELEGLKGAVTQDTFKEPSQRED 163
Query: 363 LRFNTRVRFEXRYKSGKNKWFFQKLXF 443
+ + FE +Y SGKNKWFF L F
Sbjct: 164 AKKQIKQIFEEKYTSGKNKWFFTPLRF 190
Score = 37.5 bits (83), Expect = 0.14
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 68 VVLVLSGRYAGRK-AIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDG 214
V LV Y+ R +V+ +D+G+ DK + + AGI+RYP++ + G
Sbjct: 63 VSLVALREYSRRNDVVVIKQFDDGSKDKSFPYIIAAGIERYPQKVTKRMG 112
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 92.7 bits (220), Expect = 3e-18
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 362
P KV +RMGK + KRS+IKPF+K+VNYNHLMPTRYT++ K S + K+ + R+
Sbjct: 100 PLKVTRRMGKKMVEKRSRIKPFIKIVNYNHLMPTRYTLELEGLKGAISQETFKEVSTRED 159
Query: 363 LRFNTRVRFEXRYKSGKNKWFFQKLXF 443
+ + E RY SGKN+WFF L F
Sbjct: 160 AKKTVKKALEDRYTSGKNRWFFTPLRF 186
Score = 59.3 bits (137), Expect = 4e-08
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +2
Query: 47 KIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
K MK G+V ++ GRYAG+K ++V D G+ P+ +A VAGI+RYP + + GK+
Sbjct: 53 KFMKVGRVAIITRGRYAGKKVVIVQPNDTGSKAHPFPYAIVAGIERYPLKVTRRMGKK 110
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 91.1 bits (216), Expect = 1e-17
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = +2
Query: 41 MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGK 217
MGKIMK GKVVLVL GRYAGRKAI++ +D+GTSDK +GHA VAGIDRYPR+ + K
Sbjct: 1 MGKIMKTGKVVLVLGGRYAGRKAIILKTFDDGTSDKQFGHALVAGIDRYPRRVTRRMNK 59
Score = 39.1 bits (87), Expect = 0.045
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVK 260
P +V +RM K ++HKRSKIKPF+K
Sbjct: 50 PRRVTRRMNKTRLHKRSKIKPFIK 73
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 85.0 bits (201), Expect = 7e-16
Identities = 38/71 (53%), Positives = 51/71 (71%)
Frame = +2
Query: 41 MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
MGK +KP +V LVL+GR+AG+K +V+ YD GTS++PY HAFV GIDRYPR+ GK+
Sbjct: 1 MGKFVKPDRVALVLNGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKK 60
Query: 221 *NPQEVQDKAF 253
+ + KAF
Sbjct: 61 KFERRTRVKAF 71
Score = 69.3 bits (162), Expect = 4e-11
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD-FSFEK---FSAKDLKDPAKR 356
P KV MGK K +R+++K F K +NYNHLM TRY+V F +K F K+ + R
Sbjct: 50 PRKVTATMGKKKFERRTRVKAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDR 109
Query: 357 KKLRFNTRVRFEXRYKSGKNKWFFQKLXF 443
K+ + + R+ + KN+WFF KL F
Sbjct: 110 KEFKKELQTVMRERFLAAKNRWFFTKLRF 138
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Frame = +3
Query: 132 KVPPTSRTGMLSSLVSTGTPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS 311
+ P T +L++ +V K+M + K KRSK K F+K +NY+HLMPTRYT+D +
Sbjct: 80 RTAPFGCTEILTARSVAFENAQVTKKMDEKKQAKRSKCKTFIKNINYSHLMPTRYTLDVN 139
Query: 312 FEKFSAKDLKDPAKRK-KLRFNTRVRFEXRYKSGKNKWFFQKLXF 443
F+ D+ D A +K + + E R+K+GK++WFF +L F
Sbjct: 140 FKDVVTSDVLDNATKKVAAQKEAKKLLEERFKTGKSRWFFTRLAF 184
Score = 68.5 bits (160), Expect = 6e-11
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = +2
Query: 56 KPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQ 196
+PGKVV+VL+GRYAG+KA++V N D+G S PYGHA V G+ PR+
Sbjct: 24 QPGKVVVVLAGRYAGKKAVIVKNVDDGNSAHPYGHALVCGLSTIPRK 70
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 78.6 bits (185), Expect = 6e-14
Identities = 43/119 (36%), Positives = 66/119 (55%)
Frame = +3
Query: 87 AGTRVARLS*SXITTKVPPTSRTGMLSSLVSTGTPGKVHKRMGKNKIHKRSKIKPFVKVV 266
AG + + S + TK P R +L+ + P KV + M K I +RS++ F++VV
Sbjct: 19 AGHKAVIVQNSDVVTKERPYGRA-LLAGIKKY--PKKVVRGMSKQTIARRSQVGVFLRVV 75
Query: 267 NYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEXRYKSGKNKWFFQKLXF 443
N+ H +PTRY VD S E ++ D +KR + + R F+ RY +G + WFFQ+L F
Sbjct: 76 NHKHFLPTRYNVDMSKELRGKINVSDASKRSRSKRLVRHVFQARYNAGSSMWFFQRLRF 134
Score = 70.5 bits (165), Expect = 2e-11
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = +2
Query: 41 MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
M K +KPGKVV+V +GRYAG KA++V N D T ++PYG A +AGI +YP++ + K+
Sbjct: 1 MTKFLKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKVVRGMSKQ 60
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 78.2 bits (184), Expect = 8e-14
Identities = 34/85 (40%), Positives = 53/85 (62%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLR 368
P KV + M K I +RS++ F++VVN+ H +PTRY +D S E ++ D +K+ + +
Sbjct: 49 PKKVVRGMSKRTIQRRSRVGVFLRVVNHKHFLPTRYNMDLSRELRGRINVSDASKKARSK 108
Query: 369 FNTRVRFEXRYKSGKNKWFFQKLXF 443
R F+ RY +G N+WFFQ+L F
Sbjct: 109 QLVRKLFQARYNAGSNRWFFQRLRF 133
Score = 72.1 bits (169), Expect = 5e-12
Identities = 27/50 (54%), Positives = 41/50 (82%)
Frame = +2
Query: 47 KIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQ 196
K +KPGKVV+V SGRYAG+KA++V N D + ++PYGH+ +AG+ +YP++
Sbjct: 2 KFLKPGKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYPKK 51
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 72.1 bits (169), Expect = 5e-12
Identities = 29/51 (56%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
Frame = +2
Query: 47 KIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDK--PYGHAFVAGIDRYPR 193
K +KPG++V++L+G+YAGRKA+V+ +D+ T+ K PYGH VAGID+YPR
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPR 54
Score = 70.5 bits (165), Expect = 2e-11
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK-FS------AKDLKDP 347
P + + M + I KR+ I+ FVKVVNYNH+MPTRY + E F+ +
Sbjct: 53 PRSIVRSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQV 112
Query: 348 AKRKKLRFNTRVRFEXRYKSGKNKWFFQKLXF 443
AKR R + FE ++K+GK+KWFF KL F
Sbjct: 113 AKRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF 144
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 67.3 bits (157), Expect = 1e-10
Identities = 28/61 (45%), Positives = 44/61 (72%)
Frame = +2
Query: 38 KMGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGK 217
KM K+MK G+VV++L+GRYAG+KA+VV ++ GT D+P+ VAG+++ P + + K
Sbjct: 17 KMAKLMKQGRVVVLLNGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAPLKVHKRLSK 76
Query: 218 E 220
E
Sbjct: 77 E 77
Score = 59.3 bits (137), Expect = 4e-08
Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFE 317
P KVHKR+ K K+ K+S IKPF+K +N NH+MPTRY V DF +
Sbjct: 67 PLKVHKRLSKEKLKKKSTIKPFLKSINMNHVMPTRYVVSDFDIK 110
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 64.1 bits (149), Expect = 1e-09
Identities = 24/62 (38%), Positives = 45/62 (72%)
Frame = +2
Query: 35 SKMGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDG 214
+ G+ +K G+VV++L GR+AG+KA++V + ++GT D+ +GH VAG++R P++ + G
Sbjct: 14 ASFGRGLKYGRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMG 73
Query: 215 KE 220
+
Sbjct: 74 SK 75
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +3
Query: 186 TPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTR 293
+P KV KRMG KI KR+ +KPF+K VN NH+MPTR
Sbjct: 64 SPKKVTKRMGSKKIQKRTSVKPFIKYVNLNHIMPTR 99
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 64.1 bits (149), Expect = 1e-09
Identities = 26/61 (42%), Positives = 44/61 (72%)
Frame = +2
Query: 38 KMGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGK 217
+MGK +KPG+++++L+GRYAG+KAI++ +E T D + + V GI RYPR+ + G+
Sbjct: 899 EMGKFLKPGRLIVLLAGRYAGKKAILIKANEETTKDCKFPNGLVVGIQRYPRKVTKRMGQ 958
Query: 218 E 220
+
Sbjct: 959 K 959
Score = 63.3 bits (147), Expect = 2e-09
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 8/81 (9%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKD 344
P KV KRMG+ +I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+
Sbjct: 949 PRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKESELKN 1008
Query: 345 PAKRKKLRFNTRVRFEXRYKS 407
KRK+LR N R +Y++
Sbjct: 1009 VEKRKELRKNLRKYLAEKYRT 1029
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 62.1 bits (144), Expect = 6e-09
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKD 344
P KV KRMG+ +I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+
Sbjct: 160 PRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKEAELKN 219
Query: 345 PAKRKKLRFNTRVRFEXRYKS 407
KRK LR N R +Y++
Sbjct: 220 VEKRKDLRKNLRKYLAEKYRT 240
Score = 32.7 bits (71), Expect = 3.9
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +2
Query: 38 KMGKIMKPGKVVLVLSGRYAG 100
+MGK +KPG++V++L+GR AG
Sbjct: 63 QMGKFLKPGRLVVLLAGRQAG 83
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 60.9 bits (141), Expect = 1e-08
Identities = 24/55 (43%), Positives = 41/55 (74%)
Frame = +2
Query: 53 MKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGK 217
+KPGKVV++L+GR AG+KAI++ Y+ T ++PY + VAGI+++P + ++ K
Sbjct: 97 LKPGKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCLVAGIEKHPLKVTKKMSK 151
Score = 53.6 bits (123), Expect = 2e-06
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRY 296
P KV K+M K KI KRSK+K FVK +N NH++PTRY
Sbjct: 142 PLKVTKKMSKGKIIKRSKVKAFVKYINVNHILPTRY 177
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 59.3 bits (137), Expect = 4e-08
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +2
Query: 41 MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYP 190
M KI+ PG+VV++LSGR+AG+KA+V +GT D+ YG V G++R P
Sbjct: 1 MSKILAPGRVVIILSGRFAGKKAVVSSVNLQGTKDRKYGFVTVVGVERAP 50
Score = 52.4 bits (120), Expect = 5e-06
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS-AKDLK----DPAK 353
P K+ ++M R+ +K F KV+N NH+MPT+YTV + E+F+ K +K + K
Sbjct: 50 PLKITRKMSAKVQEMRTSVKSFCKVINVNHVMPTKYTV--NLEQFNLIKQVKINNFEAGK 107
Query: 354 RKKLRFNTRV--RFEXRYKSGKNKWFFQKLXF 443
+ + +F Y+ GK W F KL F
Sbjct: 108 VYPISQKKAISSQFAEEYRKGKESWLFTKLRF 139
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 59.3 bits (137), Expect = 4e-08
Identities = 27/71 (38%), Positives = 47/71 (66%)
Frame = +2
Query: 41 MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
MGK++KPG+VV++LSGR AG KA+VV + + +PY + VAG+++ P + ++ +
Sbjct: 1 MGKLLKPGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSK 60
Query: 221 *NPQEVQDKAF 253
+ ++ KAF
Sbjct: 61 KIEKRLKLKAF 71
Score = 58.8 bits (136), Expect = 5e-08
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK---FSAKDLKDPAKRK 359
P KV K+M KI KR K+K FVK VN NHLMPTRY V + + S + +++ + RK
Sbjct: 50 PMKVTKKMSSKKIEKRLKLKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRK 109
Query: 360 KLRFNTRVRFEXRYKSGKN 416
+ R + + E + + +N
Sbjct: 110 EARKSVKAVLEECFSNPEN 128
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 58.8 bits (136), Expect = 5e-08
Identities = 25/68 (36%), Positives = 46/68 (67%)
Frame = +2
Query: 50 IMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE*NP 229
+++ G+ V++L GR+AG+KA+V+ Y EGT D+ + +A V GI++YP++ ++ E
Sbjct: 3 LLQAGRFVVMLQGRHAGKKAVVLAAYPEGTEDRKFPYAIVMGIEKYPKKVTKDMPTEVLV 62
Query: 230 QEVQDKAF 253
++ Q K F
Sbjct: 63 KKTQVKLF 70
Score = 55.2 bits (127), Expect = 6e-07
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV---DFSFEKFSAKD----LKDP 347
P KV K M + K++++K FVK VN+NH+M TR+ V DF F+K S + LKD
Sbjct: 49 PKKVTKDMPTEVLVKKTQVKLFVKAVNFNHVMLTRHNVKDEDF-FKKISVEKVVAALKDA 107
Query: 348 AKRKKLRFNTRVRFEXRYKSGKNKWFFQKLXF 443
+K L +Y + K WFF+ L F
Sbjct: 108 PAKKALLTEYAAVLRQKYLNNKMAWFFKPLQF 139
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 52.4 bits (120), Expect = 5e-06
Identities = 29/77 (37%), Positives = 41/77 (53%)
Frame = +3
Query: 213 GKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 392
G+ + +R + +P V + H+ P S K K P KRK++RF TRV+ +
Sbjct: 19 GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78
Query: 393 XRYKSGKNKWFFQKLXF 443
KSG+NKWFFQK F
Sbjct: 79 EGSKSGRNKWFFQKGRF 95
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 52.0 bits (119), Expect = 6e-06
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKF-SAKDLKDPAKRKKL 365
P ++ M + R +++ FVK +N NHLMPT ++ +++ F S + + D KR+++
Sbjct: 48 PRRITNSMSDEEAVCRGRVRSFVKCMNVNHLMPTSCRLENNYKDFISTQTVADVTKRREI 107
Query: 366 RFNTRVRFEXRYKSGKNKWFFQKL 437
F+ R ++ WFF KL
Sbjct: 108 IETVNKDFQRRILEHRDTWFFTKL 131
Score = 39.5 bits (88), Expect = 0.034
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 50 IMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQ 196
I+KPG V +VL GR+AG+KA++V + ++ +A VAGI PR+
Sbjct: 5 IIKPGLVCIVLQGRHAGKKAVIV---EALPHNERGSYAIVAGIAALPRR 50
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 48.4 bits (110), Expect = 7e-05
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +3
Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK 320
P K+ +GK KI KRSKIK FV V NYNHL RY+VD +K
Sbjct: 35 PRKLTAALGK-KISKRSKIKFFVAVYNYNHLKSIRYSVDIPLDK 77
Score = 45.6 bits (103), Expect = 5e-04
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +2
Query: 98 GRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
G +I+ + D+GTSDK Y HA VAGID YPR+ GK+
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHAQVAGIDLYPRKLTAALGKK 45
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 42.7 bits (96), Expect = 0.004
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Frame = +3
Query: 195 KVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD-----------FSFEKFSAKDLK 341
K+ M K KI + K F+K +N H+ PTRY ++ + K K +
Sbjct: 50 KIKYNMSKRKIISNLRFKTFIKTINIKHVFPTRYVIETDDVFKTLIDAYYTNKLGNKLNE 109
Query: 342 DPAKRKKLRF-NTRVRFEXRYKSGKNKWFFQKLXF 443
++ K+ + + R GKN WFF+K+ F
Sbjct: 110 HTNEKAKVNLVSINNYLQDRLLRGKNLWFFKKMKF 144
Score = 38.3 bits (85), Expect = 0.079
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 41 MGKIMKPGKVVLVLSGRYAGRKAIVVXN 124
M I K G+VV+VLSG+YAG+KA V+ N
Sbjct: 1 MVNIYKTGRVVIVLSGKYAGKKAFVLKN 28
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 37.9 bits (84), Expect = 0.10
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 231 KRSKIKPFVKVVNYN--HLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFN-TRVRFEXRY 401
KR K ++ + YN HL+ TRY D ++D A+ KK+ N T+ +
Sbjct: 53 KRRNAKFYIILKKYNIAHLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAW 112
Query: 402 KSGKNKWFFQKLXF 443
K K K+ F L F
Sbjct: 113 KENKAKFLFSSLSF 126
>UniRef50_Q5B7I5 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1480
Score = 34.3 bits (75), Expect = 1.3
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +3
Query: 177 STGTPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKR 356
S+ TP + +R+G + S IK ++ V +H++PTRY + A L A R
Sbjct: 920 SSDTPADILQRLGDVNVSTMSHIKQQLEQVMPHHMVPTRYQIWARMPTSLAGKLDRKALR 979
Query: 357 KKL 365
K+L
Sbjct: 980 KEL 982
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 33.9 bits (74), Expect = 1.7
Identities = 10/36 (27%), Positives = 27/36 (75%)
Frame = +2
Query: 29 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEG 136
+P+K+ ++PG ++++L+GR+ G++ I++ + +G
Sbjct: 50 HPTKLRPSLQPGTILILLAGRFRGKRVILLKHLGQG 85
>UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 406
Score = 33.5 bits (73), Expect = 2.2
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 29 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGID 181
Y + +I + V +V++ RY G+ E D+P GHAF AG+D
Sbjct: 212 YAYAIARIAEESPVPIVVARRYIGKIKNSAEEVVEIMPDQPLGHAFRAGVD 262
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 33.1 bits (72), Expect = 3.0
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 47 KIMKPGKVVLVLSGRYAGRKAIVVXNYDEG 136
K + PG V+++L+GR+AG++ + + D G
Sbjct: 89 KSITPGTVLIILAGRFAGKRVVALKQLDSG 118
>UniRef50_Q2HYH7 Cluster: Helicase; n=1; Bacillus thuringiensis
serovar tenebrionis|Rep: Helicase - Bacillus
thuringiensis subsp. tenebrionis
Length = 767
Score = 32.7 bits (71), Expect = 3.9
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 395 LFKTYSRVETQLLTFCRVFQV-FCAEFFKAEVNCITCWHQVIIVYNLHERLYLGPLVDFI 219
LF+ Y + + LT + F ++FF+ E N I C + +I ++ R L L+ +
Sbjct: 445 LFREYDLQDYKSLTIHKTCASNFNSKFFRNEYNIIDCAYLIIDEVSMIPREILSKLLQAV 504
Query: 218 LSHPLVHFAG 189
SH + FAG
Sbjct: 505 PSHVKIIFAG 514
>UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protein;
n=1; gamma proteobacterium HTCC2207|Rep: Short chain
dehydrogenase family protein - gamma proteobacterium
HTCC2207
Length = 282
Score = 32.7 bits (71), Expect = 3.9
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 177 IPATKACPYGLSEVPSS*XLTTIALRPAYRPLKTSTTLPGFIILPILEG 31
IP+T A PY S+ + + YR ++ S PG I PIL G
Sbjct: 151 IPSTNAVPYSTSKFAVVGLSQALRIEAEYRGVRVSALCPGAIQTPILTG 199
>UniRef50_A0LGL6 Cluster: Phospholipid/glycerol acyltransferase;
n=1; Syntrophobacter fumaroxidans MPOB|Rep:
Phospholipid/glycerol acyltransferase - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 244
Score = 32.7 bits (71), Expect = 3.9
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -3
Query: 296 ITCWHQVIIVYNLHERLYLGPLVDFIL---SHPLVHFAGGTCR 177
IT W +I++Y LH LY D +L S L+ + G CR
Sbjct: 18 ITLWISIIVIYRLHRGLYTRRHCDSLLRWWSRKLLRYVGMNCR 60
>UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila
melanogaster|Rep: CG17050-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 32.7 bits (71), Expect = 3.9
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 285 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 371
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 32.7 bits (71), Expect = 3.9
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 41 MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDE 133
M K++ G+VV+ + GR AGRKA+VV DE
Sbjct: 1 MVKVIDIGRVVVKVLGREAGRKAVVVDIVDE 31
>UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 131
Score = 32.3 bits (70), Expect = 5.2
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +2
Query: 62 GKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE*NPQEVQ 241
GK++ L+G+YAG+ +V +Y + + K + H V + + + + + Q
Sbjct: 8 GKLIFSLAGKYAGKYGFIVKSYSKYKNFKNFNHFLVCFLTN-TKFTNKNSKSFISKMNDQ 66
Query: 242 DKAFREGCKL*SLDAN 289
K F+ KL L+AN
Sbjct: 67 PKIFKYKIKLKILNAN 82
>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
hookeri (Hooker's evening primrose)
Length = 2434
Score = 32.3 bits (70), Expect = 5.2
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 276 HLMPTRYTVDFS-FEKFSAKDLKDPAKRKKLRFNTRVRFEXRYKSGKNKW 422
HL RY + + +F K+LKD + ++L F+++++ + SGKN+W
Sbjct: 1628 HLDKLRYVLQYDGTSRFLKKELKDYFEAQEL-FHSKLKHKNSLNSGKNQW 1676
>UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Kinesin
motor domain containing protein - Tetrahymena thermophila
SB210
Length = 974
Score = 31.9 bits (69), Expect = 6.8
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 216 KNKIHKRSKIKPFV--KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKL 365
K + +K + F+ K++ YN P YT +F +EK ++ KRK++
Sbjct: 867 KCQFYKNKEEPQFICNKILEYNEYSPHYYTCEFGYEKCDIQECSKLIKRKEI 918
>UniRef50_UPI0000D9DE6C Cluster: PREDICTED: similar to 60S ribosomal
protein L32; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L32 - Macaca mulatta
Length = 199
Score = 31.5 bits (68), Expect = 9.0
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 126 TTKVPPTSRTGMLSSLVSTGTPGKVHKRMG-KNKIHKRSKIKPFVKVVNYNHLMPTRYTV 302
T P +S+T M S L TG +V G N+IH+R K + + + Y ++T+
Sbjct: 76 TRHSPGSSQTDM-SKLSVTGRHLEVLTTRGIDNRIHRRFKSQFLMSNIGYGSNKKIKHTL 134
Query: 303 DFSFEKFSAKDLKD 344
S +KF ++K+
Sbjct: 135 PSSLQKFLVHNIKE 148
>UniRef50_Q9A909 Cluster: Helicase, putative; n=3;
Alphaproteobacteria|Rep: Helicase, putative -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 813
Score = 31.5 bits (68), Expect = 9.0
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = -2
Query: 153 YGLSEVPS----S*XLTTIALRPAYRPLKTSTTLPGF 55
YGLSE PS LT L PA+RP++ + LPGF
Sbjct: 738 YGLSEHPSVAGGKVPLTLSLLSPAHRPIQITKDLPGF 774
>UniRef50_Q0IMT6 Cluster: Os12g0542200 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0542200 protein -
Oryza sativa subsp. japonica (Rice)
Length = 760
Score = 31.5 bits (68), Expect = 9.0
Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 2/92 (2%)
Frame = +3
Query: 117 SXITTKVPPTSRTGMLSSLVS--TGTPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPT 290
S T+K+P T RT +LSS S TP KI + P P+
Sbjct: 534 STATSKIPSTPRTSLLSSSTSKIPSTPSTCELSTATGKIPSTTCTSPLSTATGKTSSTPS 593
Query: 291 RYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVR 386
+ S K S+ P ++ T R
Sbjct: 594 TSPLSTSTSKTSSTPSTSPLSSSTIKIPTTAR 625
>UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeba
histolytica|Rep: 60S ribosomal protein L6 - Entamoeba
histolytica
Length = 92
Score = 31.5 bits (68), Expect = 9.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 38 KMGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKP 151
K+ K + PG +++++ G+YAG+K VV +G S P
Sbjct: 53 KLRKSIVPGAILIIVGGKYAGKK--VVSLPSQGVSSAP 88
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 31.5 bits (68), Expect = 9.0
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 32 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGT 139
P K+ + PG V+++L+GR+ G++ + + + ++ T
Sbjct: 27 PQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNT 62
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,065,759
Number of Sequences: 1657284
Number of extensions: 8182090
Number of successful extensions: 24733
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 24132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24714
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -