Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_E04
         (460 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    52   2e-09
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   2.4  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    20   9.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    20   9.6  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 52.4 bits (120), Expect = 2e-09
 Identities = 29/77 (37%), Positives = 41/77 (53%)
 Frame = +3

Query: 213 GKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 392
           G+ +  +R + +P V   +  H+ P       S      K  K P KRK++RF TRV+ +
Sbjct: 19  GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78

Query: 393 XRYKSGKNKWFFQKLXF 443
              KSG+NKWFFQK  F
Sbjct: 79  EGSKSGRNKWFFQKGRF 95


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 246 KPFVKVVNYNHLMPTRY 296
           K F  +VN  HL+ T+Y
Sbjct: 83  KNFTNIVNLTHLLETQY 99


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 273 YSLQPSRKALSWTSCGFY 220
           +SLQ + + L +++CGF+
Sbjct: 333 FSLQLAHQKLEFSACGFF 350


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 273 YSLQPSRKALSWTSCGFY 220
           +SLQ + + L +++CGF+
Sbjct: 158 FSLQLAHQKLEFSACGFF 175


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 101  DPRTGHLRPALLYPASL 51
            D +TGH+ P   YP  +
Sbjct: 2520 DKQTGHVAPLYYYPGDV 2536


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +3

Query: 27  NIPPRWV 47
           N+PPRW+
Sbjct: 696 NVPPRWI 702


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +3

Query: 183 GTPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKF 323
           GTP K       N + K   +   V V   NHL      + F+F+ +
Sbjct: 14  GTPPKFELPTTHNCLKKVLLLSQIVGVFPLNHLNEEPEKLHFTFKSW 60


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 380 SRVETQLLTFCRVFQVFCAEFF 315
           +++ T L  +C V  VF   FF
Sbjct: 67  AKITTILQRYCSVLLVFLTYFF 88


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 380 SRVETQLLTFCRVFQVFCAEFF 315
           +++ T L  +C V  VF   FF
Sbjct: 63  AKITTILQRYCSVLLVFLTYFF 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,133
Number of Sequences: 336
Number of extensions: 2136
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)