Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_E04
         (460 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L19527-1|AAA19815.1|  136|Homo sapiens ribosomal protein L27 pro...   111   8e-25
L05094-1|AAC15857.1|  136|Homo sapiens ribosomal protein L27 pro...   111   8e-25
BC098560-1|AAH98560.1|  136|Homo sapiens ribosomal protein L27 p...   111   8e-25
BC021886-1|AAH21886.1|  140|Homo sapiens RPL27 protein protein.       111   8e-25
BC010026-1|AAH10026.1|  136|Homo sapiens ribosomal protein L27 p...   111   8e-25
BC007273-1|AAH07273.1|  136|Homo sapiens ribosomal protein L27 p...   111   8e-25
BC002588-1|AAH02588.1|  136|Homo sapiens ribosomal protein L27 p...   111   8e-25
BC001700-1|AAH01700.1|  136|Homo sapiens ribosomal protein L27 p...   111   8e-25
AB061851-1|BAB79492.1|  136|Homo sapiens ribosomal protein L27 p...   111   8e-25
U25752-1|AAA93226.1|   40|Homo sapiens ribosomal protein L27 pro...    56   8e-08
AB065857-1|BAC06075.1|  315|Homo sapiens seven transmembrane hel...    29   5.8  

>L19527-1|AAA19815.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  111 bits (268), Expect = 8e-25
 Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = +3

Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 362
           P KV   MGK KI KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K
Sbjct: 50  PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109

Query: 363 LRFNTRVRFEXRYKSGKNKWFFQKLXF 443
            R   +V+FE RYK+GKNKWFFQKL F
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136



 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 44/71 (61%), Positives = 55/71 (77%)
 Frame = +2

Query: 41  MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
           MGK MKPGKVVLVL+GRY+GRKA++V N D+GTSD+PY HA VAGIDRYPR+     GK+
Sbjct: 1   MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60

Query: 221 *NPQEVQDKAF 253
              +  + K+F
Sbjct: 61  KIAKRSKIKSF 71


>L05094-1|AAC15857.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  111 bits (268), Expect = 8e-25
 Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = +3

Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 362
           P KV   MGK KI KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K
Sbjct: 50  PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109

Query: 363 LRFNTRVRFEXRYKSGKNKWFFQKLXF 443
            R   +V+FE RYK+GKNKWFFQKL F
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136



 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 44/71 (61%), Positives = 55/71 (77%)
 Frame = +2

Query: 41  MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
           MGK MKPGKVVLVL+GRY+GRKA++V N D+GTSD+PY HA VAGIDRYPR+     GK+
Sbjct: 1   MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60

Query: 221 *NPQEVQDKAF 253
              +  + K+F
Sbjct: 61  KIAKRSKIKSF 71


>BC098560-1|AAH98560.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  111 bits (268), Expect = 8e-25
 Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = +3

Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 362
           P KV   MGK KI KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K
Sbjct: 50  PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109

Query: 363 LRFNTRVRFEXRYKSGKNKWFFQKLXF 443
            R   +V+FE RYK+GKNKWFFQKL F
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136



 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 44/71 (61%), Positives = 55/71 (77%)
 Frame = +2

Query: 41  MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
           MGK MKPGKVVLVL+GRY+GRKA++V N D+GTSD+PY HA VAGIDRYPR+     GK+
Sbjct: 1   MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60

Query: 221 *NPQEVQDKAF 253
              +  + K+F
Sbjct: 61  KIAKRSKIKSF 71


>BC021886-1|AAH21886.1|  140|Homo sapiens RPL27 protein protein.
          Length = 140

 Score =  111 bits (268), Expect = 8e-25
 Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = +3

Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 362
           P KV   MGK KI KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K
Sbjct: 54  PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 113

Query: 363 LRFNTRVRFEXRYKSGKNKWFFQKLXF 443
            R   +V+FE RYK+GKNKWFFQKL F
Sbjct: 114 ARREAKVKFEERYKTGKNKWFFQKLRF 140



 Score = 75.8 bits (178), Expect = 7e-14
 Identities = 34/60 (56%), Positives = 45/60 (75%)
 Frame = +2

Query: 74  LVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE*NPQEVQDKAF 253
           LVL+GRY+GRKA++V N D+GTSD+PY HA VAGIDRYPR+     GK+   +  + K+F
Sbjct: 16  LVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 75


>BC010026-1|AAH10026.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  111 bits (268), Expect = 8e-25
 Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = +3

Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 362
           P KV   MGK KI KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K
Sbjct: 50  PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109

Query: 363 LRFNTRVRFEXRYKSGKNKWFFQKLXF 443
            R   +V+FE RYK+GKNKWFFQKL F
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136



 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 44/71 (61%), Positives = 55/71 (77%)
 Frame = +2

Query: 41  MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
           MGK MKPGKVVLVL+GRY+GRKA++V N D+GTSD+PY HA VAGIDRYPR+     GK+
Sbjct: 1   MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60

Query: 221 *NPQEVQDKAF 253
              +  + K+F
Sbjct: 61  KIAKRSKIKSF 71


>BC007273-1|AAH07273.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  111 bits (268), Expect = 8e-25
 Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = +3

Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 362
           P KV   MGK KI KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K
Sbjct: 50  PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109

Query: 363 LRFNTRVRFEXRYKSGKNKWFFQKLXF 443
            R   +V+FE RYK+GKNKWFFQKL F
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136



 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 44/71 (61%), Positives = 55/71 (77%)
 Frame = +2

Query: 41  MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
           MGK MKPGKVVLVL+GRY+GRKA++V N D+GTSD+PY HA VAGIDRYPR+     GK+
Sbjct: 1   MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60

Query: 221 *NPQEVQDKAF 253
              +  + K+F
Sbjct: 61  KIAKRSKIKSF 71


>BC002588-1|AAH02588.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  111 bits (268), Expect = 8e-25
 Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = +3

Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 362
           P KV   MGK KI KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K
Sbjct: 50  PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109

Query: 363 LRFNTRVRFEXRYKSGKNKWFFQKLXF 443
            R   +V+FE RYK+GKNKWFFQKL F
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136



 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 44/71 (61%), Positives = 55/71 (77%)
 Frame = +2

Query: 41  MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
           MGK MKPGKVVLVL+GRY+GRKA++V N D+GTSD+PY HA VAGIDRYPR+     GK+
Sbjct: 1   MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60

Query: 221 *NPQEVQDKAF 253
              +  + K+F
Sbjct: 61  KIAKRSKIKSF 71


>BC001700-1|AAH01700.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  111 bits (268), Expect = 8e-25
 Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = +3

Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 362
           P KV   MGK KI KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K
Sbjct: 50  PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109

Query: 363 LRFNTRVRFEXRYKSGKNKWFFQKLXF 443
            R   +V+FE RYK+GKNKWFFQKL F
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136



 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 44/71 (61%), Positives = 55/71 (77%)
 Frame = +2

Query: 41  MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
           MGK MKPGKVVLVL+GRY+GRKA++V N D+GTSD+PY HA VAGIDRYPR+     GK+
Sbjct: 1   MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60

Query: 221 *NPQEVQDKAF 253
              +  + K+F
Sbjct: 61  KIAKRSKIKSF 71


>AB061851-1|BAB79492.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  111 bits (268), Expect = 8e-25
 Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = +3

Query: 189 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 362
           P KV   MGK KI KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K
Sbjct: 50  PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109

Query: 363 LRFNTRVRFEXRYKSGKNKWFFQKLXF 443
            R   +V+FE RYK+GKNKWFFQKL F
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136



 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 44/71 (61%), Positives = 55/71 (77%)
 Frame = +2

Query: 41  MGKIMKPGKVVLVLSGRYAGRKAIVVXNYDEGTSDKPYGHAFVAGIDRYPRQSAQEDGKE 220
           MGK MKPGKVVLVL+GRY+GRKA++V N D+GTSD+PY HA VAGIDRYPR+     GK+
Sbjct: 1   MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60

Query: 221 *NPQEVQDKAF 253
              +  + K+F
Sbjct: 61  KIAKRSKIKSF 71


>U25752-1|AAA93226.1|   40|Homo sapiens ribosomal protein L27
           protein.
          Length = 40

 Score = 55.6 bits (128), Expect = 8e-08
 Identities = 24/39 (61%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
 Frame = +3

Query: 330 KDL-KDPAKRKKLRFNTRVRFEXRYKSGKNKWFFQKLXF 443
           KD+ +DPA ++K R   +V+FE RYK+GKNKWFFQKL F
Sbjct: 2   KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 40


>AB065857-1|BAC06075.1|  315|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 315

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 332 FCAEFFKAEVNCITCWHQVIIVYNLHERLYL 240
           FCA +  A V  IT  H + I + LHE +YL
Sbjct: 34  FCATYAVAVVGNITLLHVIRIDHTLHEPMYL 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,728,086
Number of Sequences: 237096
Number of extensions: 1223074
Number of successful extensions: 2775
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2766
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)