Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_E02
(603 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26096| Best HMM Match : Glyco_hydro_1 (HMM E-Value=5.3e-19) 40 0.001
SB_47095| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_32102| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_21634| Best HMM Match : Toxin_19 (HMM E-Value=9.2) 31 0.72
SB_11187| Best HMM Match : F5_F8_type_C (HMM E-Value=3.7e-10) 29 2.2
SB_56706| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_52310| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_39840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_34470| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_31644| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_18991| Best HMM Match : RVT_1 (HMM E-Value=2.8e-34) 28 6.7
SB_11322| Best HMM Match : Pkinase_C (HMM E-Value=4.1) 28 6.7
SB_15883| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_8835| Best HMM Match : RVT_1 (HMM E-Value=1.2e-36) 28 6.7
SB_22736| Best HMM Match : F5_F8_type_C (HMM E-Value=6.4e-24) 27 8.8
>SB_26096| Best HMM Match : Glyco_hydro_1 (HMM E-Value=5.3e-19)
Length = 204
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 276 FPKGFKFGVATASFQVEGAWNVSGK 350
FP+ F +GVATA+ Q+EGAWN GK
Sbjct: 15 FPESFIWGVATAAHQIEGAWNEDGK 39
>SB_47095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +3
Query: 276 FPKGFKFGVATASFQVEGAWNVSGK 350
FP F++G AT+++Q+EGAW+V GK
Sbjct: 36 FPADFEWGSATSAYQIEGAWDVDGK 60
>SB_32102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 31.1 bits (67), Expect = 0.72
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -2
Query: 548 ISQYEARATLKXQLSVSVITHXYRTLQIVKHRYFTVVTHTYXQVSXDRGRRNVV 387
+SQ R T K S S+ + Y K +T VTHTY Q + + GR N++
Sbjct: 106 LSQIRVRET-KNYFSASIDKNIYPNC--FKLSQYTKVTHTYYQFNFELGRPNII 156
>SB_21634| Best HMM Match : Toxin_19 (HMM E-Value=9.2)
Length = 193
Score = 31.1 bits (67), Expect = 0.72
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -2
Query: 548 ISQYEARATLKXQLSVSVITHXYRTLQIVKHRYFTVVTHTYXQVSXDRGRRNVV 387
+SQ R T K S S+ + Y K +T V HTY Q S + GR N++
Sbjct: 9 LSQIRVRKT-KNYFSASIAKNIYPNC--FKLSQYTEVNHTYYQFSFELGRPNII 59
>SB_11187| Best HMM Match : F5_F8_type_C (HMM E-Value=3.7e-10)
Length = 1163
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 500 SVITHXYRTLQIVKHRYFTVVTHTY 426
S+ITH Y I H +F+++TH Y
Sbjct: 922 SIITHHYFFSIITDHYFFSIITHHY 946
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 500 SVITHXYRTLQIVKHRYFTVVTHTY 426
S+ITH Y + I H F+++TH Y
Sbjct: 940 SIITHHYFFVIITHHYIFSIITHHY 964
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 500 SVITHXYRTLQIVKHRYFTVVTHTY 426
S+ITH Y I H +F ++TH Y
Sbjct: 1021 SIITHHYFFSIITHHYFFVIITHHY 1045
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 500 SVITHXYRTLQIVKHRYFTVVTHTY 426
S+ITH Y + I H +F+++TH +
Sbjct: 1030 SIITHHYFFVIITHHYFFSIITHHF 1054
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 500 SVITHXYRTLQIVKHRYFTVVTHTY 426
S+ITH Y I H +F ++TH Y
Sbjct: 1093 SIITHHYFFSIITYHYFFVIITHHY 1117
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 500 SVITHXYRTLQIVKHRYFTVVTHTY 426
S+ITH + I H +F+++TH Y
Sbjct: 1012 SIITHHFFFSIITHHYFFSIITHHY 1036
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 500 SVITHXYRTLQIVKHRYFTVVTHTY 426
S+ITH + I H +F+++TH Y
Sbjct: 1048 SIITHHFFFSIITDHYFFSIITHHY 1072
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 500 SVITHXYRTLQIVKHRYFTVVTHTY 426
S+ITH Y + I H F++ TH Y
Sbjct: 1129 SIITHHYSFVIITYHYIFSIFTHHY 1153
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 500 SVITHXYRTLQIVKHRYFTVVTHTY 426
S+ITH Y I H +F+++TH +
Sbjct: 958 SIITHHYFFSIITHHFFFSIITHHF 982
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 500 SVITHXYRTLQIVKHRYFTVVTHTY 426
S+ITH + I H +F+++TH Y
Sbjct: 976 SIITHHFFFSIITHHFFFSIITHHY 1000
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 500 SVITHXYRTLQIVKHRYFTVVTHTY 426
S+ITH Y I H +F+++TH +
Sbjct: 994 SIITHHYFFSIITHHFFFSIITHHF 1018
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 500 SVITHXYRTLQIVKHRYFTVVTHTY 426
S+ITH + I H +F+++TH Y
Sbjct: 1003 SIITHHFFFSIITHHFFFSIITHHY 1027
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 497 VITHXYRTLQIVKHRYFTVVTHTY 426
+ITH Y I H +F+++TH Y
Sbjct: 1076 IITHHYIFPIITHHDFFSIITHHY 1099
>SB_56706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/36 (30%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -2
Query: 506 SVSVITHXYRTLQIVKHRYFT--VVTHTYXQVSXDR 405
S+S+I H Y +L +++H + + ++ HT+ +S R
Sbjct: 31 SLSLIRHTYSSLSLIRHTHSSLFLIRHTHSSLSLTR 66
>SB_52310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 84 VYYYFVCSLLLISRWLXEFRLHP 152
VY Y C L+ R + FRLHP
Sbjct: 52 VYMYVTCVYTLVGRRVRHFRLHP 74
>SB_39840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 55 LLFFVYNN*VCIIISFAHFY*YRDGXRNSDSIRXY-NNILLNT 180
L Y+N +C+ F H Y + + N+D + Y NNI +NT
Sbjct: 2 LYHHTYHNNICVNTDFLHVY-HNNICVNTDFLHAYHNNICVNT 43
>SB_34470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 328 PSTWKDAVATPNLKPLGKQSCSRR-RPALNRSYTISI 221
P+ WK+A TP LK K + + RP N +T I
Sbjct: 12 PADWKEAAVTPLLKKGAKDTGNNNLRPVSNLQFTYKI 48
>SB_31644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 935
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/64 (32%), Positives = 27/64 (42%)
Frame = +1
Query: 274 VSLKVSNSE*PQRLSRSKEPGTCLVRXGVHYLMLVLDXTTLRRPRSXDT*XYVCVTTVK* 453
V K+ S P + R K P TC + G+ +M V T R RS C +
Sbjct: 681 VMKKLRRSSIPPKTERHKNPDTCYLERGLECIMKV----TADRLRSLH--IEDCGVLISD 734
Query: 454 RCFT 465
RCFT
Sbjct: 735 RCFT 738
>SB_18991| Best HMM Match : RVT_1 (HMM E-Value=2.8e-34)
Length = 899
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 328 PSTWKDAVATPNLKPLGKQSCSRR-RPALNRSYTISI 221
P+ WK+A TP LK K + + RP N +T I
Sbjct: 271 PADWKEAAVTPLLKKGAKDTGNNNLRPVSNLQFTSKI 307
>SB_11322| Best HMM Match : Pkinase_C (HMM E-Value=4.1)
Length = 236
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 328 PSTWKDAVATPNLKPLGKQSCSRRRPALNRSYTISI 221
P+ WK+A TP LK G + RP N +T I
Sbjct: 44 PADWKEAAVTPLLKK-GATGNTNLRPVSNLQFTSKI 78
>SB_15883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 328 PSTWKDAVATPNLKPLGKQSCSRRRPALNRSYTISI 221
P+ WK+A TP LK G + RP N +T I
Sbjct: 44 PADWKEAAVTPLLKK-GATGNTNLRPVSNLQFTSKI 78
>SB_8835| Best HMM Match : RVT_1 (HMM E-Value=1.2e-36)
Length = 979
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 328 PSTWKDAVATPNLKPLGKQSCSRR-RPALNRSYTISI 221
P+ WK+A TP LK K + + RP N +T I
Sbjct: 507 PADWKEAAVTPLLKKGAKDTGNNNLRPVSNLQFTSKI 543
>SB_22736| Best HMM Match : F5_F8_type_C (HMM E-Value=6.4e-24)
Length = 1039
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 328 PSTWKDAVATPNLKPLGKQSCSRR-RPALNRSYTISI 221
P+ WK+A TP LK K + + RP N +T I
Sbjct: 105 PADWKEAAVTPLLKKGAKDTGNNNLRPVSNLQFTSRI 141
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,921,705
Number of Sequences: 59808
Number of extensions: 313792
Number of successful extensions: 811
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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