Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_E02
         (603 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical pr...    35   0.039
AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical ...    35   0.039
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr...    28   4.5  

>U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical
           protein C50F7.10 protein.
          Length = 479

 Score = 35.1 bits (77), Expect = 0.039
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +3

Query: 276 FPKGFKFGVATASFQVEGAWNVSGK 350
           FPK F+   ATA++Q+EGA N+ G+
Sbjct: 7   FPKNFQLATATAAYQIEGAKNLDGR 31


>AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical
           protein E02H9.5 protein.
          Length = 475

 Score = 35.1 bits (77), Expect = 0.039
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = +3

Query: 276 FPKGFKFGVATASFQVEGAWNVSGK 350
           FPK FK   ATA++Q+EGA +++G+
Sbjct: 7   FPKNFKLATATAAYQIEGAKDLNGR 31


>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
            F15G9.4b protein.
          Length = 5198

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -3

Query: 406  GVDVMWXSPTLTLNNERRFLPDTFQAPSTWKD-AVATPNLKPLGKQSCSRRRPA 248
            GVDV W    LT+N +        Q PS+ K  +  +      G+ +C  R PA
Sbjct: 2598 GVDVEWQKDGLTINQDTLRGDSFIQIPSSGKKMSFLSARKSDSGRYTCIVRNPA 2651


>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
            F15G9.4a protein.
          Length = 5175

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -3

Query: 406  GVDVMWXSPTLTLNNERRFLPDTFQAPSTWKD-AVATPNLKPLGKQSCSRRRPA 248
            GVDV W    LT+N +        Q PS+ K  +  +      G+ +C  R PA
Sbjct: 2598 GVDVEWQKDGLTINQDTLRGDSFIQIPSSGKKMSFLSARKSDSGRYTCIVRNPA 2651


>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
            F15G9.4b protein.
          Length = 5198

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -3

Query: 406  GVDVMWXSPTLTLNNERRFLPDTFQAPSTWKD-AVATPNLKPLGKQSCSRRRPA 248
            GVDV W    LT+N +        Q PS+ K  +  +      G+ +C  R PA
Sbjct: 2598 GVDVEWQKDGLTINQDTLRGDSFIQIPSSGKKMSFLSARKSDSGRYTCIVRNPA 2651


>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
            F15G9.4a protein.
          Length = 5175

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -3

Query: 406  GVDVMWXSPTLTLNNERRFLPDTFQAPSTWKD-AVATPNLKPLGKQSCSRRRPA 248
            GVDV W    LT+N +        Q PS+ K  +  +      G+ +C  R PA
Sbjct: 2598 GVDVEWQKDGLTINQDTLRGDSFIQIPSSGKKMSFLSARKSDSGRYTCIVRNPA 2651


>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
            precursor protein.
          Length = 5198

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -3

Query: 406  GVDVMWXSPTLTLNNERRFLPDTFQAPSTWKD-AVATPNLKPLGKQSCSRRRPA 248
            GVDV W    LT+N +        Q PS+ K  +  +      G+ +C  R PA
Sbjct: 2598 GVDVEWQKDGLTINQDTLRGDSFIQIPSSGKKMSFLSARKSDSGRYTCIVRNPA 2651


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,307,542
Number of Sequences: 27780
Number of extensions: 227391
Number of successful extensions: 360
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)