Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_D24
         (497 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   2.5  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    24   2.5  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   3.3  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   5.8  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   7.6  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +3

Query: 351  RAKRRIQYNR-RFVNVVQTFGRRRGPNSNS 437
            ++++ ++YN  RF+NV Q   R+   +SNS
Sbjct: 1246 KSEQLLKYNSARFLNVSQAGSRKNSADSNS 1275


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 92  NWPGVHWSDQGTHSYSC 142
           NW   HW++QGT + +C
Sbjct: 261 NWD-FHWAEQGTSNNAC 276


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = -3

Query: 228 QMMRAQRQDMNHVKGLHIMIE*GLHRQLQQEYECVP*SDQWTPGQLTSRTCV-DCP 64
           Q  +  RQ + H K   + +   L +Q QQ+ +      Q  P QL   T V  CP
Sbjct: 374 QQQQQPRQSLPHRKQTQLQLSPRLQQQQQQQQQSQQ-QQQQQPQQLLWTTVVRSCP 428


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 202  HESCKGAPHNDRVRSSSPT 146
            H SC+G P++  + ++ PT
Sbjct: 1777 HPSCEGFPYSRTIYANDPT 1795


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 112 PMDSWPVDVQDVCRLPSDMQLHSCKILS 29
           P  SWPV       +PSD ++   ++LS
Sbjct: 468 PPVSWPVSSDAPTTVPSDSRVEPQELLS 495


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,042
Number of Sequences: 2352
Number of extensions: 8559
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)