Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_D22
(649 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 317 5e-87
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 314 4e-86
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 314 4e-86
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 312 1e-85
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 312 2e-85
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 312 2e-85
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 311 3e-85
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 310 5e-85
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 309 9e-85
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 151 3e-37
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 151 3e-37
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 149 2e-36
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 149 2e-36
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 148 4e-36
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 146 8e-36
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 146 8e-36
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 129 2e-30
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 128 2e-30
At4g37190.1 68417.m05265 expressed protein 34 0.094
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.87
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 29 2.0
At5g24010.1 68418.m02821 protein kinase family protein contains ... 29 2.7
At4g22070.1 68417.m03192 WRKY family transcription factor identi... 29 2.7
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 3.5
At1g45201.2 68414.m05185 lipase class 3 family protein Since thi... 29 3.5
At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)... 29 3.5
At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)... 29 3.5
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 28 6.1
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 6.1
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 8.1
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 317 bits (778), Expect = 5e-87
Identities = 143/187 (76%), Positives = 159/187 (85%), Gaps = 1/187 (0%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 268
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 269 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 448
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 449 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDTV 628
VRKEAE+CDCLQGFQ KI EEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 629 XXPYNAT 649
PYNAT
Sbjct: 181 VEPYNAT 187
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 314 bits (770), Expect = 4e-86
Identities = 142/186 (76%), Positives = 157/186 (84%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 271
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 272 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 451
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 452 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDTVX 631
RKEAE+CDCLQGFQ KI EEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 632 XPYNAT 649
PYNAT
Sbjct: 181 EPYNAT 186
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 314 bits (770), Expect = 4e-86
Identities = 144/187 (77%), Positives = 157/187 (83%), Gaps = 1/187 (0%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 268
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 269 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 448
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 449 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDTV 628
VRKEAE+CDCLQGFQ KI EEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 629 XXPYNAT 649
PYNAT
Sbjct: 181 VEPYNAT 187
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 312 bits (767), Expect = 1e-85
Identities = 144/186 (77%), Positives = 155/186 (83%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 271
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 272 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 451
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 452 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDTVX 631
RKEAE+CDCLQGFQ KI EEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 632 XPYNAT 649
PYNAT
Sbjct: 181 EPYNAT 186
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 312 bits (765), Expect = 2e-85
Identities = 142/186 (76%), Positives = 155/186 (83%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 271
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 272 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 451
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 452 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDTVX 631
RKEAE+CDCLQGFQ KI EEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 632 XPYNAT 649
PYNAT
Sbjct: 181 EPYNAT 186
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 312 bits (765), Expect = 2e-85
Identities = 142/186 (76%), Positives = 155/186 (83%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 271
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 272 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 451
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 452 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDTVX 631
RKEAE+CDCLQGFQ KI EEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 632 XPYNAT 649
PYNAT
Sbjct: 181 EPYNAT 186
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 311 bits (763), Expect = 3e-85
Identities = 144/186 (77%), Positives = 155/186 (83%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 271
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 272 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 451
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 452 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDTVX 631
RKEAE+ DCLQGFQ KI EEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 632 XPYNAT 649
PYNAT
Sbjct: 181 EPYNAT 186
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 310 bits (761), Expect = 5e-85
Identities = 141/186 (75%), Positives = 156/186 (83%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 271
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 272 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 451
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 452 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDTVX 631
RKEAE+CDCLQGFQ KI EEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 632 XPYNAT 649
PYNAT
Sbjct: 181 EPYNAT 186
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 309 bits (759), Expect = 9e-85
Identities = 140/186 (75%), Positives = 155/186 (83%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 271
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 272 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 451
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 452 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDTVX 631
RKEAE+CDCLQGFQ KI EEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 632 XPYNAT 649
PYNAT
Sbjct: 181 EPYNAT 186
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 151 bits (367), Expect = 3e-37
Identities = 73/187 (39%), Positives = 106/187 (56%), Gaps = 2/187 (1%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 265
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 266 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 445
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 446 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDT 625
VRK A++C LQGF ++ +Y + +++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 626 VXXPYNA 646
V PYN+
Sbjct: 181 VVEPYNS 187
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 151 bits (367), Expect = 3e-37
Identities = 73/187 (39%), Positives = 106/187 (56%), Gaps = 2/187 (1%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 265
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 266 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 445
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 446 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDT 625
VRK A++C LQGF ++ +Y + +++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 626 VXXPYNA 646
V PYN+
Sbjct: 181 VVEPYNS 187
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 149 bits (361), Expect = 2e-36
Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 265
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 266 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 445
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 446 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDT 625
+RK A++C LQGF ++ +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 626 VXXPYNA 646
V PYN+
Sbjct: 181 VVEPYNS 187
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 149 bits (361), Expect = 2e-36
Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 265
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 266 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 445
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 446 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDT 625
+RK A++C LQGF ++ +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 626 VXXPYNA 646
V PYN+
Sbjct: 181 VVEPYNS 187
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 148 bits (358), Expect = 4e-36
Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 2/187 (1%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 265
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 266 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 445
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 446 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDT 625
+RK A++C LQGF ++ ++ + +++ PSP+VS
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 626 VXXPYNA 646
V PYN+
Sbjct: 181 VVEPYNS 187
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 146 bits (355), Expect = 8e-36
Identities = 72/187 (38%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 265
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 266 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 445
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 446 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDT 625
+RK A++C LQGF ++ +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 626 VXXPYNA 646
V PYN+
Sbjct: 181 VVEPYNS 187
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 146 bits (355), Expect = 8e-36
Identities = 72/187 (38%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 265
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 266 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 445
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 446 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSPKVSDT 625
+RK A++C LQGF ++ +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 626 VXXPYNA 646
V PYN+
Sbjct: 181 VVEPYNS 187
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 129 bits (311), Expect = 2e-30
Identities = 62/187 (33%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Frame = +2
Query: 95 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 274
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 275 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 448
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 449 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSP-KVSDT 625
+ +EA+ D L+GF + + Y +++ TYSV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 626 VXXPYNA 646
V PYN+
Sbjct: 182 VVQPYNS 188
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 128 bits (310), Expect = 2e-30
Identities = 62/187 (33%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Frame = +2
Query: 95 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 274
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 275 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 448
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 449 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEEYPDRIMNTYSVVPSP-KVSDT 625
+ +EA+ D L+GF + + Y +++ TYSV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 626 VXXPYNA 646
V PYN+
Sbjct: 182 VVQPYNS 188
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.9 bits (74), Expect = 0.094
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 259
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 260 GKYVPRAILVDLEP--GTMDS 316
Y PR + V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.7 bits (66), Expect = 0.87
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 425 LVDSVLDVVRKEAESCDCLQGF 490
+++SV VVRKEAE+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -3
Query: 542 GGCPYRNRCRRRASVSVGIPGGNHTIPLPFERRLKLNRRAQHPPCS 405
G CP R R S G GG P+P RR KL P CS
Sbjct: 32 GSCPRRRIQERFKSEQGGGGGGGDDFPVPVTRR-KLRAEPNCPRCS 76
>At5g24010.1 68418.m02821 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 824
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 507 SECVSWNPWRQSHDSASFRTTSKTESTSSAPSV*CPLAQL 388
SE W P R+ S++ RTT +T S+S ++ A+L
Sbjct: 443 SESTGWTPLRRFRGSSNSRTTERTVSSSGYHTLRISFAEL 482
>At4g22070.1 68417.m03192 WRKY family transcription factor identical
to WRKY transcription factor 31 (WRKY31) GI:15990589
from [Arabidopsis thaliana]
Length = 538
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -3
Query: 542 GGCPYRN---RCRRRASVSVGIPGGNHTIPLP 456
GGCP R RC S+ + GNH PLP
Sbjct: 326 GGCPVRKQVQRCAEDRSILITTYEGNHNHPLP 357
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 500 VSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSC 387
VS G+PG HT P ++ ++ +++ P S PW SC
Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172
>At1g45201.2 68414.m05185 lipase class 3 family protein Since this
genomic sequence region is unfinished, the annotated
gene may be missing a stop codon or start codon
Length = 479
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -3
Query: 578 FCQGTLL*FWR*GGCPYRNRCRRRASVSVGI--PGGNHTIPLPFERRLKLNRRAQHPPCS 405
F + +L FW+ G Y+ R VGI PGG++ P + +L + PP +
Sbjct: 412 FIRSFILQFWK--GDEYKENWLMRFVRVVGIVFPGGSNHFPFDYVNSTRLGGLVRPPPTT 469
Query: 404 VP 399
P
Sbjct: 470 TP 471
>At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 397 GPVVAGAGLSEDEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 230
GP G G +LSER R DR++ LQ V A + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 229 ALQLQVRVPMVGTG 188
+LQLQV++ + +G
Sbjct: 391 SLQLQVQIMSMASG 404
>At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 397 GPVVAGAGLSEDEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 230
GP G G +LSER R DR++ LQ V A + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 229 ALQLQVRVPMVGTG 188
+LQLQV++ + +G
Sbjct: 391 SLQLQVQIMSMASG 404
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 27.9 bits (59), Expect = 6.1
Identities = 34/127 (26%), Positives = 48/127 (37%), Gaps = 8/127 (6%)
Frame = -2
Query: 489 NPWRQSHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG------ 328
N R DSA+ ++S ++ S+ S + PAP P L ICP G
Sbjct: 98 NNLRPRSDSATTSSSSHSQPLLSSSSS----SATSPAPTSPANVLPTGNICPSGKIQITG 153
Query: 327 --PERTESMVPGSKSTRMARGTYLPPEASL*YTLMRSNCKSESPW*APVGSMPCSSEMIS 154
R+ S V GS + G+ + + S SP VGS SS ++
Sbjct: 154 MTQSRSRSDVLGSGTGTYGHGSIMRGGGISPAKPTNTGGGSNSP--VNVGSSSRSSSTVA 211
Query: 153 QNLAPIW 133
PIW
Sbjct: 212 TGETPIW 218
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.9 bits (59), Expect = 6.1
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -1
Query: 262 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 83
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 98 EIVHIQAGQCGNQIGAKFWEIISD 169
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,962,169
Number of Sequences: 28952
Number of extensions: 260886
Number of successful extensions: 784
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -