Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_D21
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   2.7  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.3  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 357 IKVILFSKFFLLGTFFPSAFIIVV 286
           +K  L S F    TFF S FI+V+
Sbjct: 38  VKTYLVSDFENYVTFFCSLFIVVI 61


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 115 IKFKKHNLLKLKTAPQCFVSFTDX*ILFG 29
           + F +HNL++LK     F       ILFG
Sbjct: 134 LPFLEHNLIRLKNCVIYFNRIFGWNILFG 162


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 60  TKHWGAVFN 86
           TK WG+VFN
Sbjct: 259 TKTWGSVFN 267


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 127 LINIIKFKKHNLLKLKTAPQCFVSFTD 47
           L+ + KFKK  LL + +   C++  T+
Sbjct: 214 LLRLPKFKKKPLLCVVSTLSCYLERTE 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,863
Number of Sequences: 336
Number of extensions: 2015
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)