Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_D19
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotei... 130 3e-29
UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46... 128 2e-28
UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotei... 107 2e-22
UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotei... 90 4e-17
UniRef50_Q54RX0 Cluster: LSM (Like-Sm) domain-containing protein... 87 3e-16
UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein polypep... 79 7e-14
UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putati... 76 6e-13
UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is associ... 76 9e-13
UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotei... 75 1e-12
UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus ory... 74 3e-12
UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1; ... 73 6e-12
UniRef50_Q6CRN4 Cluster: Similar to sp|P40204 Saccharomyces cere... 67 4e-10
UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1... 64 3e-09
UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein ... 62 1e-08
UniRef50_A7TGG5 Cluster: Putative uncharacterized protein; n=1; ... 60 6e-08
UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa g... 60 6e-08
UniRef50_A7QWV4 Cluster: Chromosome chr13 scaffold_210, whole ge... 59 1e-07
UniRef50_A4S1J9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 58 2e-07
UniRef50_Q4N4E0 Cluster: Small nuclear ribonucleoprotein G, puta... 57 4e-07
UniRef50_Q7SDP3 Cluster: Putative uncharacterized protein NCU019... 57 4e-07
UniRef50_Q9UK45 Cluster: U6 snRNA-associated Sm-like protein LSm... 57 4e-07
UniRef50_Q4MYV9 Cluster: U6 snRNA-associated protein, putative; ... 56 1e-06
UniRef50_Q6MY59 Cluster: U6 snrna-associated sm-like protein, pu... 54 2e-06
UniRef50_Q4Q5H5 Cluster: Small nuclear ribonucleoprotein, putati... 54 4e-06
UniRef50_A0D0Y9 Cluster: Chromosome undetermined scaffold_33, wh... 54 4e-06
UniRef50_A2GMH6 Cluster: Sm protein; n=3; Trichomonas vaginalis ... 53 5e-06
UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;... 53 7e-06
UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3; M... 52 1e-05
UniRef50_UPI0000D9E97B Cluster: PREDICTED: LSM7 homolog, U6 smal... 52 2e-05
UniRef50_Q5CY65 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_P53905 Cluster: U6 snRNA-associated Sm-like protein LSm... 52 2e-05
UniRef50_Q40942 Cluster: Small nucleolar ribonucleoprotein E hom... 51 2e-05
UniRef50_Q4Z0C4 Cluster: U6 snRNA-associated Sm-like protein, pu... 50 4e-05
UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 50 5e-05
UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog... 48 1e-04
UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4; T... 48 2e-04
UniRef50_A4VCU1 Cluster: Small nuclear ribonucleoprotein E, puta... 48 3e-04
UniRef50_A7PDU1 Cluster: Chromosome chr11 scaffold_13, whole gen... 47 3e-04
UniRef50_Q54W83 Cluster: Putative uncharacterized protein; n=1; ... 47 5e-04
UniRef50_Q9UUI1 Cluster: U6 snRNA-associated Sm-like protein LSm... 46 6e-04
UniRef50_P62312 Cluster: U6 snRNA-associated Sm-like protein LSm... 46 6e-04
UniRef50_Q4PA95 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)... 44 0.002
UniRef50_Q6DBW5 Cluster: Zgc:101136; n=6; Euteleostomi|Rep: Zgc:... 44 0.003
UniRef50_P87173 Cluster: Uncharacterized protein C3D6.08c; n=1; ... 44 0.003
UniRef50_P47017 Cluster: Sm-like protein LSm1; n=11; Saccharomyc... 44 0.003
UniRef50_A4S5K5 Cluster: Predicted protein; n=1; Ostreococcus lu... 44 0.004
UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 44 0.004
UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4; Eu... 44 0.004
UniRef50_Q4Q9J1 Cluster: Lsm7p protein, putative; n=6; Trypanoso... 43 0.006
UniRef50_Q01J34 Cluster: OSIGBa0140O07.9 protein; n=5; Oryza sat... 43 0.007
UniRef50_Q6BPZ2 Cluster: Debaryomyces hansenii chromosome E of s... 43 0.007
UniRef50_A1DH91 Cluster: Small nuclear ribonucleoprotein (LSM1),... 43 0.007
UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog... 43 0.007
UniRef50_Q6BQK4 Cluster: Similar to CA3420|CaSMX4 Candida albica... 42 0.010
UniRef50_O75243 Cluster: R30783_1; n=3; Mammalia|Rep: R30783_1 -... 42 0.013
UniRef50_O74483 Cluster: U6 snRNA-associated Sm-like protein LSm... 42 0.013
UniRef50_A2Y859 Cluster: Putative uncharacterized protein; n=2; ... 42 0.017
UniRef50_Q8SRW7 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN G; n=1;... 41 0.022
UniRef50_Q2FM21 Cluster: Like-Sm ribonucleoprotein, core; n=4; M... 41 0.022
UniRef50_Q9YEQ5 Cluster: Putative snRNP Sm-like protein; n=1; Ae... 41 0.022
UniRef50_Q98S49 Cluster: Small nuclear ribonucleoprotein F; n=1;... 41 0.030
UniRef50_A3LX11 Cluster: Predicted protein; n=3; Saccharomycetac... 41 0.030
UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10; A... 41 0.030
UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm... 41 0.030
UniRef50_Q4V6D7 Cluster: IP05148p; n=2; Drosophila melanogaster|... 40 0.039
UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albica... 40 0.039
UniRef50_A3DMZ9 Cluster: Like-Sm ribonucleoprotein, core; n=1; S... 40 0.052
UniRef50_P62304 Cluster: Small nuclear ribonucleoprotein E; n=51... 40 0.052
UniRef50_Q9AVY1 Cluster: Putative small nuclear ribonucleoprotei... 40 0.069
UniRef50_Q5K712 Cluster: U6 snRNA-associated sm-like protein lsm... 40 0.069
UniRef50_A1CE19 Cluster: LSM domain protein; n=3; Trichocomaceae... 40 0.069
UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm... 40 0.069
UniRef50_Q2R066 Cluster: Small nuclear ribonucleoprotein F, puta... 39 0.091
UniRef50_Q4UHZ4 Cluster: (U6) snRNA-associated Sm-like protein, ... 39 0.091
UniRef50_Q8TQX4 Cluster: Sm protein; n=8; Archaea|Rep: Sm protei... 39 0.091
UniRef50_Q7ZUG0 Cluster: Small nuclear ribonucleoprotein E; n=18... 39 0.091
UniRef50_Q7QPB0 Cluster: GLP_122_3813_3433; n=1; Giardia lamblia... 39 0.12
UniRef50_A4VDT4 Cluster: Putative uncharacterized protein; n=1; ... 39 0.12
UniRef50_Q9SUM2 Cluster: Probable small nuclear ribonucleoprotei... 39 0.12
UniRef50_P40018 Cluster: Small nuclear ribonucleoprotein-associa... 39 0.12
UniRef50_A0C1J5 Cluster: Chromosome undetermined scaffold_142, w... 38 0.16
UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm... 38 0.16
UniRef50_A1CDT1 Cluster: Small nuclear ribonucleoprotein SmE, pu... 38 0.16
UniRef50_O29885 Cluster: SnRNP, putative; n=1; Archaeoglobus ful... 38 0.16
UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4; Th... 38 0.16
UniRef50_Q5CQ90 Cluster: Small nuclear ribonucleoprotein U6; n=1... 38 0.21
UniRef50_Q4MZX3 Cluster: Small nuclear ribonucleoprotein, putati... 38 0.21
UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm... 38 0.28
UniRef50_Q9Y4Y9 Cluster: U6 snRNA-associated Sm-like protein LSm... 38 0.28
UniRef50_Q755T6 Cluster: AER432Cp; n=1; Eremothecium gossypii|Re... 37 0.37
UniRef50_Q24297 Cluster: Small nuclear ribonucleoprotein F; n=7;... 37 0.37
UniRef50_P57743 Cluster: U6 snRNA-associated Sm-like protein LSm... 37 0.37
UniRef50_A7AQW8 Cluster: Small nuclear ribonucleoprotein F, puta... 37 0.48
UniRef50_Q6CGS0 Cluster: Similar to sp|P47017 Saccharomyces cere... 37 0.48
UniRef50_P34659 Cluster: Probable small nuclear ribonucleoprotei... 37 0.48
UniRef50_A2X0E3 Cluster: Putative uncharacterized protein; n=2; ... 36 0.64
UniRef50_Q7QZM9 Cluster: GLP_680_47464_47838; n=1; Giardia lambl... 36 0.64
UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core, ... 36 0.64
UniRef50_A2E014 Cluster: Sm protein; n=2; Trichomonas vaginalis ... 36 0.64
UniRef50_Q8SRU9 Cluster: U6 snRNA-ASSOCIATED SMALL RIBONUCLEOPRO... 36 0.64
UniRef50_A3BPN8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.84
UniRef50_A0CCJ3 Cluster: Chromosome undetermined scaffold_167, w... 36 0.84
UniRef50_Q74ZR8 Cluster: AGR130Wp; n=2; Saccharomycetales|Rep: A... 36 0.84
UniRef50_A6R7U2 Cluster: Predicted protein; n=2; Eurotiomycetida... 36 0.84
UniRef50_Q4JAY5 Cluster: Conserved Archaeal protein; n=4; Sulfol... 36 0.84
UniRef50_A0D2M7 Cluster: Chromosome undetermined scaffold_35, wh... 36 1.1
UniRef50_Q701X8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q0WMZ9 Cluster: Sm-like protein; n=19; Eukaryota|Rep: S... 35 1.5
UniRef50_A6S4U0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_A3FQK4 Cluster: Small nuclear ribonucleoprotein, putati... 35 2.0
UniRef50_Q5KN63 Cluster: Sm-like protein, putative; n=1; Filobas... 35 2.0
UniRef50_Q4MZU2 Cluster: U6 snRNA-associated Sm-like protein LSm... 34 2.6
UniRef50_Q8SQK1 Cluster: U6 snRNA-ASSOCIATED RIBONUCLEOPROTEIN; ... 34 2.6
UniRef50_Q4PB34 Cluster: Putative uncharacterized protein; n=3; ... 34 2.6
UniRef50_UPI0000499412 Cluster: U6 snRNA-associated Sm-like prot... 33 4.5
UniRef50_O22305 Cluster: Peptide transporter; n=1; Lotus japonic... 33 4.5
UniRef50_Q7R4T3 Cluster: GLP_440_43387_42998; n=1; Giardia lambl... 33 4.5
UniRef50_Q5CME6 Cluster: Similar to small nuclear ribonucleoprot... 33 4.5
UniRef50_A7ARJ0 Cluster: Small nuclear ribonucleoprotein F, puta... 33 4.5
UniRef50_Q6CWY1 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 33 4.5
UniRef50_UPI00015533A8 Cluster: PREDICTED: similar to Snrpf prot... 33 6.0
UniRef50_A3QER8 Cluster: DNA polymerase III, alpha subunit; n=1;... 33 6.0
UniRef50_Q3LWL6 Cluster: MRNA splicing protein; n=1; Bigelowiell... 33 6.0
UniRef50_Q9W087 Cluster: CG2021-PA; n=14; Eukaryota|Rep: CG2021-... 33 6.0
UniRef50_Q8MYW8 Cluster: RE61341p; n=1; Drosophila melanogaster|... 33 6.0
UniRef50_A2DQD7 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 33 6.0
UniRef50_Q4P8W1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_P62306 Cluster: Small nuclear ribonucleoprotein F; n=20... 33 6.0
UniRef50_Q12330 Cluster: Small nuclear ribonucleoprotein E; n=3;... 33 6.0
UniRef50_Q025U8 Cluster: Amidohydrolase; n=1; Solibacter usitatu... 33 7.9
UniRef50_Q9LMB5 Cluster: F14D16.28; n=6; core eudicotyledons|Rep... 33 7.9
UniRef50_A2EQ40 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 33 7.9
UniRef50_A2E8V8 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 33 7.9
UniRef50_Q6CX51 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 33 7.9
UniRef50_Q0UQD0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_A7F5M4 Cluster: Putative uncharacterized protein; n=4; ... 33 7.9
UniRef50_Q8U0P4 Cluster: Putative snRNP Sm-like protein; n=11; E... 33 7.9
>UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotein
G; n=14; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein G - Drosophila melanogaster (Fruit
fly)
Length = 76
Score = 130 bits (314), Expect = 3e-29
Identities = 55/76 (72%), Positives = 70/76 (92%)
Frame = +3
Query: 258 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMV 437
MSKAHPPE+KK+MDK++ +KLN GRAVTG+LRGFDPFMN+ LD++VEECKD +NN+GMV
Sbjct: 1 MSKAHPPEVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGMV 60
Query: 438 VIRGNSIIMLESLHRL 485
VIRGNSI+M+E+L R+
Sbjct: 61 VIRGNSIVMVEALDRV 76
>UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46;
Eukaryota|Rep: Small nuclear ribonucleoprotein G - Homo
sapiens (Human)
Length = 76
Score = 128 bits (308), Expect = 2e-28
Identities = 59/76 (77%), Positives = 66/76 (86%)
Frame = +3
Query: 258 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMV 437
MSKAHPPELKKFMDKKLS+KLN GR V G+LRGFDPFMNL +DE VE GQ+NN+GMV
Sbjct: 1 MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMV 60
Query: 438 VIRGNSIIMLESLHRL 485
VIRGNSIIMLE+L R+
Sbjct: 61 VIRGNSIIMLEALERV 76
>UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotein
G; n=16; Bilateria|Rep: Probable small nuclear
ribonucleoprotein G - Caenorhabditis elegans
Length = 77
Score = 107 bits (258), Expect = 2e-22
Identities = 46/76 (60%), Positives = 61/76 (80%)
Frame = +3
Query: 258 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMV 437
MSK HPPELKK+MDK++ +KLN R V+G+LRGFDPFMN+ +DE+VE KDG N+GM
Sbjct: 1 MSKTHPPELKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQKDGGSVNLGMT 60
Query: 438 VIRGNSIIMLESLHRL 485
VIRGNS++++E R+
Sbjct: 61 VIRGNSVVIMEPKERI 76
>UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotein
G; n=7; Ascomycota|Rep: Probable small nuclear
ribonucleoprotein G - Schizosaccharomyces pombe (Fission
yeast)
Length = 77
Score = 90.2 bits (214), Expect = 4e-17
Identities = 38/76 (50%), Positives = 60/76 (78%)
Frame = +3
Query: 258 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMV 437
MSKA P+LKK++D+++ ++LN R V GVLRG+D F+N+ L++S+EE DG++ +G V
Sbjct: 1 MSKAGAPDLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIEEKVDGEKVKIGSV 60
Query: 438 VIRGNSIIMLESLHRL 485
IRGNS+IM+E+L ++
Sbjct: 61 AIRGNSVIMIETLDKM 76
>UniRef50_Q54RX0 Cluster: LSM (Like-Sm) domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: LSM (Like-Sm)
domain-containing protein - Dictyostelium discoideum AX4
Length = 85
Score = 87.0 bits (206), Expect = 3e-16
Identities = 39/80 (48%), Positives = 55/80 (68%)
Frame = +3
Query: 252 ITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVG 431
+T K P+L K +DKKL+IKLN R V G+LRGFD FMN+ L ++VE ++ +G
Sbjct: 1 MTFGKQADPDLTKLLDKKLAIKLNGNRTVHGILRGFDTFMNIALKDTVEVVSPTEKYEIG 60
Query: 432 MVVIRGNSIIMLESLHRL*Y 491
MV+IRGNSI+++E L + Y
Sbjct: 61 MVIIRGNSILLMEPLESMAY 80
>UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein
polypeptide G; n=1; Hyacinthus orientalis|Rep: Small
nuclear ribonucleoprotein polypeptide G - Hyacinthus
orientalis (Common hyacinth)
Length = 96
Score = 79.4 bits (187), Expect = 7e-14
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 HITMSKAHPPELKKFMD-KKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNN 425
H + PP LK+ KL IKLNA R V G LRGFD FMNL +D ++ E +N+
Sbjct: 14 HHAAASGQPPALKQVHGTSKLQIKLNANRVVVGTLRGFDQFMNLVIDNTM-EVNGNDKND 72
Query: 426 VGMVVIRGNSIIMLESL 476
+GMVVIRGNS++M+E+L
Sbjct: 73 IGMVVIRGNSVVMIEAL 89
>UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putative;
n=8; Eukaryota|Rep: Small nuclear ribonucleoprotein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 83
Score = 76.2 bits (179), Expect = 6e-13
Identities = 39/79 (49%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = +3
Query: 252 ITMSKAHPP-ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNV 428
+T+ KA P + +KFM+K+L I LN R V G+LRG+D FMNL LD ++E KD ++ ++
Sbjct: 3 LTVGKAGPASDFRKFMEKRLQIYLNGNRQVVGILRGYDTFMNLVLDNTMEIKKD-EQIDI 61
Query: 429 GMVVIRGNSIIMLESLHRL 485
G+VVIRGNSI E L ++
Sbjct: 62 GVVVIRGNSISYWECLDKV 80
>UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins; n=1;
Aspergillus niger|Rep: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins -
Aspergillus niger
Length = 105
Score = 75.8 bits (178), Expect = 9e-13
Identities = 32/70 (45%), Positives = 53/70 (75%)
Frame = +3
Query: 261 SKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVV 440
++A+ +++M+K++ +LN R V G+LRG+D FMN+ LDE+ EE + G++ +GM+V
Sbjct: 12 TEANIAVFQQYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGEKVAIGMIV 71
Query: 441 IRGNSIIMLE 470
IRGNS++MLE
Sbjct: 72 IRGNSVVMLE 81
>UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotein
E; n=1; Ostreococcus tauri|Rep: Putative small nuclear
ribonucleoprotein E - Ostreococcus tauri
Length = 101
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/63 (50%), Positives = 49/63 (77%)
Frame = +3
Query: 288 KFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSIIML 467
++MDKKL ++LN R+VTG+LRGFD F+NL LD+S + ++ +GMVV+RGNS++ +
Sbjct: 29 RYMDKKLRLRLNGNRSVTGILRGFDQFLNLVLDDSTNDTTT-EKTPMGMVVVRGNSVVSM 87
Query: 468 ESL 476
E+L
Sbjct: 88 EAL 90
>UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 122
Score = 73.7 bits (173), Expect = 3e-12
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +3
Query: 294 MDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSIIMLE 470
M+K++ +LN R V G+LRG+D FMN+ LDE+ EE + G++ +GMVVIRGNS++MLE
Sbjct: 1 MEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGEKVAIGMVVIRGNSVVMLE 59
>UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 134
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 10/86 (11%)
Frame = +3
Query: 258 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEEC----------K 407
M+K PELK+F+DK++++ + GR + G LRGFD F+NL +DE++E+ +
Sbjct: 48 MAKVSQPELKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDEAIEQVHPEAGNPNVWQ 107
Query: 408 DGQRNNVGMVVIRGNSIIMLESLHRL 485
DG R G VV+RGNS+ LE+L +
Sbjct: 108 DGDR--CGTVVVRGNSVTSLEALENV 131
>UniRef50_Q6CRN4 Cluster: Similar to sp|P40204 Saccharomyces
cerevisiae YFL017wa SNP2 snRNP G protein; n=1;
Kluyveromyces lactis|Rep: Similar to sp|P40204
Saccharomyces cerevisiae YFL017wa SNP2 snRNP G protein -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 71
Score = 66.9 bits (156), Expect = 4e-10
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +3
Query: 285 KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSIIM 464
K++MDKKL ++LN R + G+LRG+D F+NL LD ++ ++G+ V+RGNSI+
Sbjct: 5 KQYMDKKLILQLNGNRKIIGILRGYDAFLNLVLDNPIQIFEEGEVQMGPQTVVRGNSIVS 64
Query: 465 LESLHRL 485
+E L L
Sbjct: 65 IEPLDSL 71
>UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1;
Filobasidiella neoformans|Rep: U6 snRNA binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 131
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQ-RNNVGMVVIRGNSI 458
L +F+DK + +K GR TG+L+G+D MNL +D+ VEE +DG+ ++G+VV+RG +I
Sbjct: 29 LAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEEYEDGRPTRSLGLVVLRGPNI 88
Query: 459 IML 467
+++
Sbjct: 89 VLV 91
>UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein G;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein G - Entamoeba histolytica HM-1:IMSS
Length = 81
Score = 61.7 bits (143), Expect = 1e-08
Identities = 27/69 (39%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Frame = +3
Query: 276 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECK-DGQRN-NVGMVVIRG 449
PELK +++K++ +K++ R++ GVL G+D +MNL LDE+ + D ++ +GM++I G
Sbjct: 6 PELKHYLEKRILVKIHGKRSIIGVLSGYDEYMNLVLDEAYDASNPDTDKHIPIGMIMILG 65
Query: 450 NSIIMLESL 476
NSI+ +E++
Sbjct: 66 NSILSVETI 74
>UniRef50_A7TGG5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 126
Score = 59.7 bits (138), Expect = 6e-08
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKD---------GQRNNVG 431
+L K+ D K+ +KL GR VTGVL+G+DP M L LDE+VE +D Q ++G
Sbjct: 40 DLAKYKDTKIRVKLMGGRLVTGVLKGYDPLMTLVLDETVEYLRDLEDSSIILKDQTRDLG 99
Query: 432 MVVIRGNSIIML 467
+ VIRG ++ L
Sbjct: 100 LTVIRGTVLLSL 111
>UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa
group|Rep: Predicted protein - Ajellomyces capsulatus
NAm1
Length = 171
Score = 59.7 bits (138), Expect = 6e-08
Identities = 26/67 (38%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRN----NVGMVVIR 446
+L K+M+K++ +K N GR VTG L+G+D MNL LD+ E +D + N ++G++V R
Sbjct: 86 DLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVREVMRDDEGNQTTRSLGLIVAR 145
Query: 447 GNSIIML 467
G ++++
Sbjct: 146 GTLLVLI 152
>UniRef50_A7QWV4 Cluster: Chromosome chr13 scaffold_210, whole
genome shotgun sequence; n=8; Eukaryota|Rep: Chromosome
chr13 scaffold_210, whole genome shotgun sequence -
Vitis vinifera (Grape)
Length = 113
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 8/71 (11%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKD--------GQRNNVGM 434
+L KF+DK + +KL GR VTG L+G+D +NL LDE+VE +D Q +G+
Sbjct: 24 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKTTDQTRRLGL 83
Query: 435 VVIRGNSIIML 467
+V RG +++++
Sbjct: 84 IVCRGTAVMLV 94
>UniRef50_A4S1J9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 100
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/74 (35%), Positives = 48/74 (64%), Gaps = 8/74 (10%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDG--------QRNNVGM 434
+L +F+D+ + +KL+ GR VTG L+G+D +NL LDE++E +D + +G+
Sbjct: 9 DLARFIDRGVRVKLSGGREVTGTLKGYDQLLNLVLDEAIEHLRDAEDALKISDETRALGL 68
Query: 435 VVIRGNSIIMLESL 476
+V RG S++++ +L
Sbjct: 69 LVCRGTSVMVVSAL 82
>UniRef50_Q4N4E0 Cluster: Small nuclear ribonucleoprotein G,
putative; n=2; Piroplasmida|Rep: Small nuclear
ribonucleoprotein G, putative - Theileria parva
Length = 86
Score = 56.8 bits (131), Expect = 4e-07
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +3
Query: 312 IKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSIIMLESLHRL 485
+ LN R V GVLRG+D FMN+ LD ++E + Q ++G+VV+RGNSI+ E L R+
Sbjct: 27 VHLNGSRHVVGVLRGYDTFMNIVLDNALEVVGEDQ-VDLGVVVVRGNSILYWECLDRV 83
>UniRef50_Q7SDP3 Cluster: Putative uncharacterized protein
NCU01930.1; n=2; Sordariomycetes|Rep: Putative
uncharacterized protein NCU01930.1 - Neurospora crassa
Length = 132
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/63 (41%), Positives = 42/63 (66%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSI 458
+LKK+MD+++++K N GR VTG L+G+D MNL LD+ E + G+VV RG +
Sbjct: 57 DLKKYMDQRITVKFNGGREVTGTLKGYDALMNLVLDDVQEAVR-------GLVVARGTLL 109
Query: 459 IML 467
+++
Sbjct: 110 VVI 112
>UniRef50_Q9UK45 Cluster: U6 snRNA-associated Sm-like protein LSm7;
n=26; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm7 - Homo sapiens (Human)
Length = 103
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKD--------GQRNNVGM 434
+L K++DK + +K GR +G+L+GFDP +NL LD ++E +D +G+
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 73
Query: 435 VVIRGNSIIML 467
VV RG S++++
Sbjct: 74 VVCRGTSVVLI 84
>UniRef50_Q4MYV9 Cluster: U6 snRNA-associated protein, putative;
n=2; Theileria|Rep: U6 snRNA-associated protein,
putative - Theileria parva
Length = 104
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 8/70 (11%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKD--------GQRNNVGMV 437
L K ++K++ +K + GR V GVLRG D NL LD++VE KD G++ N+G++
Sbjct: 17 LNKHLNKEVYVKFSGGREVKGVLRGHDAMSNLVLDDTVEYLKDSSDSSKLTGEKRNLGLL 76
Query: 438 VIRGNSIIML 467
V RG S+ ++
Sbjct: 77 VARGTSVTVV 86
>UniRef50_Q6MY59 Cluster: U6 snrna-associated sm-like protein,
putative (Small nuclear ribonucleoprotein (LSM7),
putative); n=2; Pezizomycotina|Rep: U6 snrna-associated
sm-like protein, putative (Small nuclear
ribonucleoprotein (LSM7), putative) - Aspergillus
fumigatus (Sartorya fumigata)
Length = 134
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSI 458
+L K+MDK++ +K N GR V+G+L+G+D MNL LD+ E + N++ + NS
Sbjct: 54 DLSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKESMRGKSLNDITKLDEVSNSA 113
Query: 459 IML 467
I +
Sbjct: 114 IQM 116
>UniRef50_Q4Q5H5 Cluster: Small nuclear ribonucleoprotein, putative;
n=5; Trypanosomatidae|Rep: Small nuclear
ribonucleoprotein, putative - Leishmania major
Length = 81
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/71 (35%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Frame = +3
Query: 276 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDG-----QRNNVGMVV 440
P L FM+K++ +K+ GR+++GVLRG D M++ L ++++E ++ R +G V
Sbjct: 8 PNLNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHDAMDETRNAAVSEEARLALGTTV 67
Query: 441 IRGNSIIMLES 473
IRG++I+ + S
Sbjct: 68 IRGSAIVEIVS 78
>UniRef50_A0D0Y9 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 104
Score = 53.6 bits (123), Expect = 4e-06
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 17/91 (18%)
Frame = +3
Query: 264 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVE-------ECKDG--- 413
+ + +L K+ K+L IKLNA R + G + GFD FMNL LD E E KD
Sbjct: 12 QGYQADLNKYFGKRLKIKLNAKRTIIGTVIGFDIFMNLVLDHCKELIPGQGAENKDNLYP 71
Query: 414 -------QRNNVGMVVIRGNSIIMLESLHRL 485
Q ++G ++RGNSIIM E L ++
Sbjct: 72 GFSNVTDQLVDIGQAIVRGNSIIMWECLDKV 102
>UniRef50_A2GMH6 Cluster: Sm protein; n=3; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 81
Score = 53.2 bits (122), Expect = 5e-06
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Frame = +3
Query: 252 ITMSKAHPP--ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXL-DESVEECKDGQRN 422
+ M++A PP ELK + KK+ I N R V+G+L GFD FMNL + D ++ D
Sbjct: 3 VQMTQAQPPYPELKGHLQKKVKIMSNKDREVSGILTGFDHFMNLTIRDAQIKTPYDKAPV 62
Query: 423 NVGMVVIRGNSIIMLESLH 479
VIRG I+ +E+L+
Sbjct: 63 FCNSCVIRGTMILSVETLN 81
>UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;
Eukaryota|Rep: U6 snRNP-associated protein Lsm7 -
Schizosaccharomyces pombe (Fission yeast)
Length = 113
Score = 52.8 bits (121), Expect = 7e-06
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKD-------GQRNNVGMV 437
+L ++ D+++ GR +TG+L+GFD MNL LD+ E+ ++ G +G+V
Sbjct: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLV 86
Query: 438 VIRGNSIIML 467
V+RG +++++
Sbjct: 87 VVRGTTLVLI 96
>UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3;
Methanomicrobiales|Rep: Like-Sm ribonucleoprotein, core
- Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 80
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +3
Query: 252 ITMSKAHPPELKKFMDKK-LSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNV 428
I M+K L + ++++ + I L GR + GVL+G+D MNL LD++ EE GQ ++
Sbjct: 4 IDMTKRPMDILDQVLNRQPVLISLKGGREIKGVLQGYDVHMNLVLDKA-EEIVQGQAQSI 62
Query: 429 GMVVIRGNSIIML 467
G ++IRG+++I +
Sbjct: 63 GTLIIRGDNVIYI 75
>UniRef50_UPI0000D9E97B Cluster: PREDICTED: LSM7 homolog, U6 small
nuclear RNA associated (S. cerevisiae); n=1; Macaca
mulatta|Rep: PREDICTED: LSM7 homolog, U6 small nuclear
RNA associated (S. cerevisiae) - Macaca mulatta
Length = 123
Score = 51.6 bits (118), Expect = 2e-05
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKD 410
+L K++DK + +K GR +G+L+GFDP +NL LD ++E +D
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRD 57
>UniRef50_Q5CY65 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 73
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = +3
Query: 237 YFKKHITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVE 398
Y +I MS L KF +K++ +KL GR V G+LRGFD NL LDE+VE
Sbjct: 9 YLSFNIEMSSKSILGLNKFNNKEIKVKLCGGREVIGILRGFDAVTNLVLDETVE 62
>UniRef50_P53905 Cluster: U6 snRNA-associated Sm-like protein LSm7;
n=6; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm7 - Saccharomyces cerevisiae (Baker's yeast)
Length = 115
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 11/76 (14%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECK--DGQRN---------N 425
+L K+ D K+ +KL G+ V GVL+G+D MNL LD++VE D + N
Sbjct: 29 DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARK 88
Query: 426 VGMVVIRGNSIIMLES 473
+G+ VIRG ++ L S
Sbjct: 89 LGLTVIRGTILVSLSS 104
>UniRef50_Q40942 Cluster: Small nucleolar ribonucleoprotein E
homolog; n=2; Bigelowiella natans|Rep: Small nucleolar
ribonucleoprotein E homolog - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 71
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/71 (35%), Positives = 44/71 (61%)
Frame = +3
Query: 264 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVI 443
K + P+LK FM++++ I+L + G LRGFD F+N+ L++S + N ++++
Sbjct: 4 KINIPDLKLFMEEEIQIQLKNKLCLKGTLRGFDQFLNIVLEKS---SYSKESNYFDILIV 60
Query: 444 RGNSIIMLESL 476
RGNSI+ + L
Sbjct: 61 RGNSIMSVSKL 71
>UniRef50_Q4Z0C4 Cluster: U6 snRNA-associated Sm-like protein,
putative; n=4; Plasmodium|Rep: U6 snRNA-associated
Sm-like protein, putative - Plasmodium berghei
Length = 108
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKD--------GQRNNVGM 434
++KKFM++K+ +K + GR V G L G D NL LD++ E +D + N+G+
Sbjct: 20 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEFIRDPNDSYVITEKSRNIGL 79
Query: 435 VVIRGNSIIML 467
+V RG S+ ++
Sbjct: 80 IVARGTSVALI 90
>UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Like-Sm
ribonucleoprotein, core - Candidatus Nitrosopumilus
maritimus SCM1
Length = 78
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSII 461
L + +++ + IKL + + G L GFD MNL LD S E +G+ +G +V+RG++++
Sbjct: 10 LDESINQIVLIKLKGNKTIRGNLLGFDQHMNLLLDSSEEIPAEGEAKGLGSIVVRGDNVV 69
Query: 462 ML 467
M+
Sbjct: 70 MI 71
>UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog;
n=4; Pyrobaculum|Rep: Small nuclear ribonucleoprotein
homolog - Pyrobaculum aerophilum
Length = 85
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQ-RNNVGMVVIRGNSI 458
L K ++K++ +L G AV GVL +D MNL L+++ E K G+ + G +VIRG+ +
Sbjct: 16 LTKMLNKEIIARLKGGVAVKGVLTAYDGCMNLVLNDAAELDKSGEPKTRYGRIVIRGSQV 75
Query: 459 IMLES 473
I + +
Sbjct: 76 IYVST 80
>UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4;
Thermoplasmatales|Rep: Small nuclear ribonucleoprotein -
Thermoplasma volcanium
Length = 71
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/62 (33%), Positives = 41/62 (66%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSII 461
L++ ++K++S+ L R + G L G+D +MN+ LD+ V+E + +G VVIRG++++
Sbjct: 8 LEESVNKRVSLLLKDNRVLEGTLTGYDDYMNMVLDD-VDENSENVSRKLGTVVIRGSNVV 66
Query: 462 ML 467
+
Sbjct: 67 RI 68
>UniRef50_A4VCU1 Cluster: Small nuclear ribonucleoprotein E,
putative; n=1; Tetrahymena thermophila SB210|Rep: Small
nuclear ribonucleoprotein E, putative - Tetrahymena
thermophila SB210
Length = 140
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/70 (30%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Frame = +3
Query: 291 FMDKKLSIKL----NAGRAVTGVLRGFDPFMNLXLDESVE-ECKDGQRNNVGMVVIRGNS 455
F+ K++ +++ N + G + GFD +MN+ LDE+ E +CK Q+ +G ++++G +
Sbjct: 19 FLQKQVRVQIWLFENTEIKLEGKIIGFDEYMNMVLDETSEVDCKTNQKREIGRILLKGEN 78
Query: 456 IIMLESLHRL 485
I ++ +L +L
Sbjct: 79 ITLIRNLEQL 88
>UniRef50_A7PDU1 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 242
Score = 47.2 bits (107), Expect = 3e-04
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQ---RNNVGMVVIRGN 452
L ++DKKL + L GR + GVLR FD F N L+ + E G +G+ VIRG
Sbjct: 15 LASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDIYCDIPLGLYVIRGE 74
Query: 453 SIIMLESL 476
++++L L
Sbjct: 75 NVVLLGEL 82
Score = 39.9 bits (89), Expect = 0.052
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 300 KKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQ---RNNVGMVVIRGNSIIMLE 470
+KL + L GR + GVLR FD F N L+ + E G +G+ VIRG ++++L
Sbjct: 135 EKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDIYCDIPLGLYVIRGENVVLLG 194
Query: 471 SL 476
L
Sbjct: 195 EL 196
>UniRef50_Q54W83 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 129
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +3
Query: 294 MDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQ---RNNVGMVVIRGNSIIM 464
+DKKL + L GR G++R FD F N+ L +++E G N+G+ IRG+++++
Sbjct: 9 VDKKLIVVLRDGRKFIGIMRTFDQFANIVLQDTIERIYVGDCYSDKNLGLFFIRGDNVVI 68
Query: 465 L 467
L
Sbjct: 69 L 69
>UniRef50_Q9UUI1 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=33; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm6 - Schizosaccharomyces pombe (Fission yeast)
Length = 75
Score = 46.4 bits (105), Expect = 6e-04
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNV-GMVVIRGNSI 458
L K + KK+ I+L++G G+L D +MNL L E EE +G++ NV G IRGN++
Sbjct: 9 LNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLAL-ERTEEYVNGKKTNVYGDAFIRGNNV 67
Query: 459 IMLESL 476
+ + +L
Sbjct: 68 LYVSAL 73
>UniRef50_P62312 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=22; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm6 - Homo sapiens (Human)
Length = 80
Score = 46.4 bits (105), Expect = 6e-04
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +3
Query: 252 ITMSKAHPPE-LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQ-RNN 425
+++ K P + LK+ + + + +KLN+G GVL D +MN+ L E EE +GQ +N
Sbjct: 1 MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAL-EQTEEYVNGQLKNK 59
Query: 426 VGMVVIRGNSIIMLESLHR 482
G IRGN+++ + + R
Sbjct: 60 YGDAFIRGNNVLYISTQKR 78
>UniRef50_Q4PA95 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 148
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Frame = +3
Query: 294 MDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQR-NNV--GMVVIRGNSIIM 464
+DKK+ + L G+ + GVLR +D F NL L ++VE G R +V G+ ++RG ++++
Sbjct: 22 VDKKMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDVARGIFLVRGENVVL 81
Query: 465 L 467
+
Sbjct: 82 M 82
>UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)
homolog; n=1; Methanopyrus kandleri|Rep: Small nuclear
ribonucleoprotein (SnRNP) homolog - Methanopyrus
kandleri
Length = 73
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSII 461
L+ F+D + ++L G+ + G L FD +NL LD+ VE +D + +G V+IRG+S+
Sbjct: 7 LRDFLDDIVIVELKTGKTLRGRLVSFDGHLNLVLDDCVEIDEDSE-VRLGRVLIRGDSVT 65
Query: 462 ML 467
++
Sbjct: 66 LI 67
>UniRef50_Q6DBW5 Cluster: Zgc:101136; n=6; Euteleostomi|Rep:
Zgc:101136 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 133
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Frame = +3
Query: 294 MDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQR-NNV--GMVVIRGNSIIM 464
+DKK + L GR + G+LR D F NL L ++VE G++ ++ G+ V+RG ++++
Sbjct: 14 IDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIPRGIFVVRGENVVL 73
Query: 465 L 467
L
Sbjct: 74 L 74
>UniRef50_P87173 Cluster: Uncharacterized protein C3D6.08c; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C3D6.08c - Schizosaccharomyces pombe (Fission yeast)
Length = 140
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEEC-KDGQRNNV--GMVVIRGN 452
L ++D+K+ + L G+ + G+LR FD F NL L ++E D ++ G+ ++RG
Sbjct: 16 LVDYVDRKVIVVLRDGKKLIGILRSFDQFANLMLQYTIERIYVDDMYGDIDRGVYIVRGE 75
Query: 453 SIIMLESL 476
++++L L
Sbjct: 76 NVVLLGEL 83
>UniRef50_P47017 Cluster: Sm-like protein LSm1; n=11;
Saccharomycetales|Rep: Sm-like protein LSm1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 172
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Frame = +3
Query: 294 MDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNV-----GMVVIRGNSI 458
+D+K+ + L GR + GVLR FD + NL L + VE + N G+ +IRG ++
Sbjct: 50 VDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENV 109
Query: 459 IML 467
+ML
Sbjct: 110 VML 112
>UniRef50_A4S5K5 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 126
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +3
Query: 294 MDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNN---VGMVVIRGNSIIM 464
+DK+L + L G + G LR FD F N+ L+ +VE G+ + +G+ ++RG ++++
Sbjct: 17 LDKRLLVALRDGSNIIGTLRSFDQFANIVLESAVERIIVGKMFSDIPLGLYIVRGENVVL 76
Query: 465 L 467
+
Sbjct: 77 M 77
>UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Caldivirga maquilingensis IC-167|Rep: Like-Sm
ribonucleoprotein, core - Caldivirga maquilingensis
IC-167
Length = 86
Score = 43.6 bits (98), Expect = 0.004
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNV----GMVVIRG 449
L ++K + +KL AGR ++G LR D MN+ LD++ E D + N V G V+IRG
Sbjct: 16 LGMMVNKSVVVKLKAGRVLSGTLRFIDQCMNIVLDDAEE--LDTRTNQVIVRYGKVLIRG 73
Query: 450 NSIIMLESLHRL 485
N ++ + + L
Sbjct: 74 NQVLYVSVRNEL 85
>UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4;
Euryarchaeota|Rep: Putative snRNP Sm-like protein -
Methanobacterium thermoautotrophicum
Length = 81
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +3
Query: 294 MDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQ-RNNVGMVVIRGNSIIML 467
++ + IKL R GVL+ FD MNL L+++ EE +DG+ +G V+IRG++I+ +
Sbjct: 22 LNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDA-EELEDGEVTRRLGTVLIRGDNIVYI 79
>UniRef50_Q4Q9J1 Cluster: Lsm7p protein, putative; n=6;
Trypanosomatidae|Rep: Lsm7p protein, putative -
Leishmania major
Length = 91
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +3
Query: 249 HITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNV 428
HI K L+K++D+K+ + G V GVL+GFD +NL L ++ +D +
Sbjct: 7 HILKKKEGILSLEKYLDRKIVVS-QKGHEVHGVLKGFDNNVNLVLADAELWHRDTHVRKI 65
Query: 429 GMVVIRGNSIIMLES 473
G V+RG + ++ S
Sbjct: 66 GACVVRGGPVNLILS 80
>UniRef50_Q01J34 Cluster: OSIGBa0140O07.9 protein; n=5; Oryza
sativa|Rep: OSIGBa0140O07.9 protein - Oryza sativa
(Rice)
Length = 136
Score = 42.7 bits (96), Expect = 0.007
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRN---NVGMVVIRGN 452
L F+DKKL + L GR + G L FD F N+ L + E G+ +G+ VIRG
Sbjct: 16 LAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGE 75
Query: 453 SIIMLESL 476
+++++ L
Sbjct: 76 NVVLIGEL 83
>UniRef50_Q6BPZ2 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECK 407
+L + DK++ +K GR V GVL+GFD MNL L++ E +
Sbjct: 34 DLNNYKDKQIRVKFIGGRQVIGVLKGFDQLMNLVLEDVKENIR 76
>UniRef50_A1DH91 Cluster: Small nuclear ribonucleoprotein (LSM1),
putative; n=11; Pezizomycotina|Rep: Small nuclear
ribonucleoprotein (LSM1), putative - Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 177
Score = 42.7 bits (96), Expect = 0.007
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRN---NVGMVVIRG 449
+L DKKL + L GR + GVLR +D F NL L +++E G G+ ++RG
Sbjct: 52 QLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRG 111
Query: 450 NSIIML 467
++++L
Sbjct: 112 ENVLLL 117
>UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog;
n=5; Thermoproteaceae|Rep: Small nuclear
ribonucleoprotein homolog - Pyrobaculum aerophilum
Length = 80
Score = 42.7 bits (96), Expect = 0.007
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSII 461
L+ + K++ +KL + G+LR FD +NL L E EE DG G +V+RG +++
Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLL-EDAEEIIDGNVYKRGTMVVRGENVL 74
Query: 462 ML 467
+
Sbjct: 75 FI 76
>UniRef50_Q6BQK4 Cluster: Similar to CA3420|CaSMX4 Candida albicans
CaSMX4 U6 snRNA-associated Sm-like protein; n=2;
Saccharomycetaceae|Rep: Similar to CA3420|CaSMX4 Candida
albicans CaSMX4 U6 snRNA-associated Sm-like protein -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 88
Score = 42.3 bits (95), Expect = 0.010
Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Frame = +3
Query: 273 PPELKKF-MDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVE---ECKDGQR---NNVG 431
P +L ++ +D+ + +KL R + G L+G+D N+ L ++VE + +GQ N
Sbjct: 13 PLDLVRYQLDELVLVKLRGAREMKGKLQGYDSHCNMILSDAVEYIYDVPEGQEPVTKNTD 72
Query: 432 MVVIRGNSIIMLESLH 479
MV +RG+S+I++ ++
Sbjct: 73 MVFVRGDSVILISPVN 88
>UniRef50_O75243 Cluster: R30783_1; n=3; Mammalia|Rep: R30783_1 -
Homo sapiens (Human)
Length = 145
Score = 41.9 bits (94), Expect = 0.013
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Frame = +3
Query: 327 GRAVTGVLRGFDPFMNLXLDESVEECKD--------GQRNNVGMVVIRGNSIIML 467
GR +G+L+GFDP +NL LD ++E +D +G+VV RG S++++
Sbjct: 72 GRPRSGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLI 126
>UniRef50_O74483 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=1; Schizosaccharomyces pombe|Rep: U6 snRNA-associated
Sm-like protein LSm8 - Schizosaccharomyces pombe
(Fission yeast)
Length = 94
Score = 41.9 bits (94), Expect = 0.013
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEEC----KDGQRNNVGMVVIRG 449
L FM++++ + N GR V G L+GFD NL L +S E +D + +G+ ++RG
Sbjct: 3 LADFMEQRVQVITNDGRVVLGSLKGFDHTTNLILSDSFERIISMDQDMETIPLGVYLLRG 62
Query: 450 NSIIML 467
++ M+
Sbjct: 63 ENVAMV 68
>UniRef50_A2Y859 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 41.5 bits (93), Expect = 0.017
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3
Query: 276 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVE 398
P L+ +D+ +S+ N GR + G LRGFD N+ LDES E
Sbjct: 6 PGLESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHE 46
>UniRef50_Q8SRW7 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN G; n=1;
Encephalitozoon cuniculi|Rep: SMALL NUCLEAR
RIBONUCLEOPROTEIN G - Encephalitozoon cuniculi
Length = 78
Score = 41.1 bits (92), Expect = 0.022
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 258 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVE 398
M K+ P L + K++ +++ G + G+L G+D FMN+ L E E
Sbjct: 1 MGKSAVPNLASLLHKRIVVRIGGGHTLKGLLTGYDAFMNIVLSEVTE 47
>UniRef50_Q2FM21 Cluster: Like-Sm ribonucleoprotein, core; n=4;
Methanomicrobiales|Rep: Like-Sm ribonucleoprotein, core
- Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 79
Score = 41.1 bits (92), Expect = 0.022
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +3
Query: 306 LSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSIIML 467
+ +K + GR G L D ++NL L+ES+E + +G +VIRGN+I+ +
Sbjct: 22 VEMKEDEGRTFQGRLVAVDEYLNLHLEESIETSGKNKGRELGTLVIRGNNILSI 75
>UniRef50_Q9YEQ5 Cluster: Putative snRNP Sm-like protein; n=1;
Aeropyrum pernix|Rep: Putative snRNP Sm-like protein -
Aeropyrum pernix
Length = 77
Score = 41.1 bits (92), Expect = 0.022
Identities = 16/59 (27%), Positives = 38/59 (64%)
Frame = +3
Query: 291 FMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSIIML 467
++D + +KL +G + GVL+ +D +N+ L ++ EE + +G+ ++RG+S++++
Sbjct: 16 YVDTPVLVKLKSGLRIKGVLKTYDQHLNIILGDA-EEIGETSIRRLGLTLVRGDSVVVI 73
>UniRef50_Q98S49 Cluster: Small nuclear ribonucleoprotein F; n=1;
Guillardia theta|Rep: Small nuclear ribonucleoprotein F
- Guillardia theta (Cryptomonas phi)
Length = 73
Score = 40.7 bits (91), Expect = 0.030
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +3
Query: 297 DKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSIIML 467
+K + +KL G + TG+ G D +MN+ LD E + +G+V+IR N+I+ +
Sbjct: 12 NKNVFVKLKWGSSYTGIFIGSDNYMNIILDSCSEVITEQNLGFLGLVLIRCNNILFI 68
>UniRef50_A3LX11 Cluster: Predicted protein; n=3;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 92
Score = 40.7 bits (91), Expect = 0.030
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 258 MSKAHPPELK--KFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKD 410
M+ A P L +F+ L + + GR VTG+L DPF NL L +EE +D
Sbjct: 1 MASASNPSLTPDQFIGSNLRVAIKDGRVVTGILTVIDPFGNLLLSNVIEESED 53
>UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10;
Archaea|Rep: Putative snRNP Sm-like protein -
Archaeoglobus fulgidus
Length = 77
Score = 40.7 bits (91), Expect = 0.030
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQR-NNVGMVVIRGNSI 458
L + + + ++L GR G L G+D MNL L ++ EE ++G+ VG VVIRG+++
Sbjct: 9 LNRSLKSPVIVRLKGGREFRGTLDGYDIHMNLVLLDA-EEIQNGEVVRKVGSVVIRGDTV 67
Query: 459 IML 467
+ +
Sbjct: 68 VFV 70
>UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=23; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm8 - Homo sapiens (Human)
Length = 96
Score = 40.7 bits (91), Expect = 0.030
Identities = 18/66 (27%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRN----NVGMVVIRG 449
L+ ++++ +++ + GR + G L+GFD +NL LDES E + +G+ ++RG
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 450 NSIIML 467
+++ ++
Sbjct: 65 DNVAVI 70
>UniRef50_Q4V6D7 Cluster: IP05148p; n=2; Drosophila
melanogaster|Rep: IP05148p - Drosophila melanogaster
(Fruit fly)
Length = 99
Score = 40.3 bits (90), Expect = 0.039
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +3
Query: 294 MDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQR 419
+DKKL + L GR + G LR D F NL L ++E GQR
Sbjct: 34 VDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIPCGQR 75
>UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albicans
CaLSM6; n=3; Ascomycota|Rep: Similar to CA5853|CaLSM6
Candida albicans CaLSM6 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 84
Score = 40.3 bits (90), Expect = 0.039
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNS 455
L + + ++++L+ G G L+ D +MN+ LDE+ E Q N G V IRGN+
Sbjct: 21 LSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEFVGGDQARNYGDVFIRGNN 78
>UniRef50_A3DMZ9 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Staphylothermus marinus F1|Rep: Like-Sm
ribonucleoprotein, core - Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1)
Length = 149
Score = 39.9 bits (89), Expect = 0.052
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 252 ITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFD-PFMNLXLDESVEECKDGQRNNV 428
I S+ EL +DKK+ + L GR G+L GFD P +N+ L+ +V D + N
Sbjct: 4 IDASRRLAAELAGLVDKKVKVILADGRFYEGILTGFDHPSLNILLENAV----DNKGNKY 59
Query: 429 GMVVIRGNSI 458
V+I+G I
Sbjct: 60 PKVIIKGERI 69
>UniRef50_P62304 Cluster: Small nuclear ribonucleoprotein E; n=51;
Eukaryota|Rep: Small nuclear ribonucleoprotein E - Homo
sapiens (Human)
Length = 92
Score = 39.9 bits (89), Expect = 0.052
Identities = 17/48 (35%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +3
Query: 336 VTGVLRGFDPFMNLXLDESVE-ECKDGQRNNVGMVVIRGNSIIMLESL 476
+ G + GFD +MNL LD++ E K R +G ++++G++I +L+S+
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 90
>UniRef50_Q9AVY1 Cluster: Putative small nuclear ribonucleoprotein
E; n=1; Guillardia theta|Rep: Putative small nuclear
ribonucleoprotein E - Guillardia theta (Cryptomonas phi)
Length = 78
Score = 39.5 bits (88), Expect = 0.069
Identities = 18/46 (39%), Positives = 30/46 (65%)
Frame = +3
Query: 342 GVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSIIMLESLH 479
G L GFD FMNL ++ + E+ ++G V+I+G+SI+ + S+H
Sbjct: 32 GNLIGFDEFMNLVIENTTEKKDSLIVRDLGYVLIKGDSILTISSIH 77
>UniRef50_Q5K712 Cluster: U6 snRNA-associated sm-like protein lsm6,
putative; n=1; Filobasidiella neoformans|Rep: U6
snRNA-associated sm-like protein lsm6, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 88
Score = 39.5 bits (88), Expect = 0.069
Identities = 17/68 (25%), Positives = 39/68 (57%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSII 461
L+ + K++ +++ +G TG+L D +MN+ L+++ E + + G +RGN+++
Sbjct: 21 LRNIVGKRVKVRIGSGVDYTGLLTCLDGYMNVALEQAEEWAGEVKTAAYGDCFLRGNNVL 80
Query: 462 MLESLHRL 485
+ +L L
Sbjct: 81 YISALEDL 88
>UniRef50_A1CE19 Cluster: LSM domain protein; n=3;
Trichocomaceae|Rep: LSM domain protein - Aspergillus
clavatus
Length = 108
Score = 39.5 bits (88), Expect = 0.069
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQ-RNNVGMVVIRGNS 455
L + + +++KLN+G G L+ D +MN+ L++S +E DG+ R + G IRGN+
Sbjct: 15 LSEIIGAPVTVKLNSGVVYKGELQSVDGYMNIALEQS-KEFMDGKLRRSYGDAFIRGNN 72
>UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm;
n=1; Aeropyrum pernix|Rep: Putative small nucleolar RNP
protein Sm - Aeropyrum pernix
Length = 94
Score = 39.5 bits (88), Expect = 0.069
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQR--NNVGMVVIRGNS 455
LK+ ++ ++ +KL G G L D MNL LD+++E +G R +G V+I+G+
Sbjct: 16 LKEHLNSQIYVKLKDGSEYVGKLVATDTTMNLILDDAIEVADNGTRLVAKIGRVLIKGSM 75
Query: 456 I 458
+
Sbjct: 76 V 76
>UniRef50_Q2R066 Cluster: Small nuclear ribonucleoprotein F,
putative, expressed; n=5; Oryza sativa|Rep: Small
nuclear ribonucleoprotein F, putative, expressed - Oryza
sativa subsp. japonica (Rice)
Length = 86
Score = 39.1 bits (87), Expect = 0.091
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 276 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQ-RNNVGMVVIRGN 452
P L K + +KL G G L D +MNL L + EE DGQ N+G ++IR N
Sbjct: 10 PFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQL-ANTEEYIDGQFSGNLGEILIRCN 68
Query: 453 SIIMLESL 476
+++ L +
Sbjct: 69 NVLYLRGV 76
>UniRef50_Q4UHZ4 Cluster: (U6) snRNA-associated Sm-like protein,
putative; n=3; Piroplasmida|Rep: (U6) snRNA-associated
Sm-like protein, putative - Theileria annulata
Length = 90
Score = 39.1 bits (87), Expect = 0.091
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEE--CKDG-QRNNVGMVVIRGN 452
+ K + K+ I + + +TG LRGFD +MN+ L++ V+ DG + + ++ GN
Sbjct: 16 IDKCLGSKIWIIMKNDKEITGTLRGFDDYMNMVLEDVVDYSFSADGVKTTELNDALVNGN 75
Query: 453 SIIML 467
++ ML
Sbjct: 76 NVAML 80
>UniRef50_Q8TQX4 Cluster: Sm protein; n=8; Archaea|Rep: Sm protein -
Methanosarcina acetivorans
Length = 74
Score = 39.1 bits (87), Expect = 0.091
Identities = 17/64 (26%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAG-RAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNS 455
+++K + ++ +++ + G L+ D +MNL L +++E + + ++G VV+RGN+
Sbjct: 6 KVQKIVGSRIRVEMKGDLNLLEGTLKSVDDYMNLHLVDTMEIVRGEKVRSLGSVVLRGNN 65
Query: 456 IIML 467
II++
Sbjct: 66 IILI 69
>UniRef50_Q7ZUG0 Cluster: Small nuclear ribonucleoprotein E; n=18;
Eukaryota|Rep: Small nuclear ribonucleoprotein E - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 92
Score = 39.1 bits (87), Expect = 0.091
Identities = 17/48 (35%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +3
Query: 336 VTGVLRGFDPFMNLXLDESVE-ECKDGQRNNVGMVVIRGNSIIMLESL 476
+ G + GFD +MNL LD++ E K R +G ++++G++I +L+S+
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEVHMKTKNRKPLGRIMLKGDNITLLQSV 90
>UniRef50_Q7QPB0 Cluster: GLP_122_3813_3433; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_122_3813_3433 - Giardia lamblia ATCC
50803
Length = 126
Score = 38.7 bits (86), Expect = 0.12
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSII 461
LK ++ ++S+ L ++TG+L FD MNL L + EE ++VIRG+SII
Sbjct: 57 LKTSLEDRVSVLLQNNSSITGLLASFDEHMNLIL-INAEETGHSLNRFFPLLVIRGDSII 115
Query: 462 ML 467
+
Sbjct: 116 FV 117
>UniRef50_A4VDT4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 107
Score = 38.7 bits (86), Expect = 0.12
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNV----GMVVIRG 449
L+K + KK+ I G+ + G+L+G D +N L + VE + N G+ ++RG
Sbjct: 17 LEKLLFKKIQIITTDGKVLIGILKGLDQALNSILSDCVERVFSSENNTKTIKHGLYLLRG 76
Query: 450 NSIIML 467
++I +L
Sbjct: 77 DNIAVL 82
>UniRef50_Q9SUM2 Cluster: Probable small nuclear ribonucleoprotein
F; n=7; Magnoliophyta|Rep: Probable small nuclear
ribonucleoprotein F - Arabidopsis thaliana (Mouse-ear
cress)
Length = 88
Score = 38.7 bits (86), Expect = 0.12
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 276 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQ-RNNVGMVVIRGN 452
P L K + +KL G G L D +MNL L + EE DGQ N+G ++IR N
Sbjct: 10 PFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNT-EEYIDGQLTGNLGEILIRCN 68
Query: 453 SIIMLESL 476
+++ + +
Sbjct: 69 NVLYVRGV 76
>UniRef50_P40018 Cluster: Small nuclear ribonucleoprotein-associated
protein B; n=4; Saccharomycetales|Rep: Small nuclear
ribonucleoprotein-associated protein B - Saccharomyces
cerevisiae (Baker's yeast)
Length = 196
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +3
Query: 267 AHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEE 401
AH L +D KL + GR G L FD MNL L+E +EE
Sbjct: 7 AHSSRLANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEE 51
>UniRef50_A0C1J5 Cluster: Chromosome undetermined scaffold_142,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 95
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 321 NAGRAVTGVLRGFDPFMNLXLDESVE-ECKDGQRNNVGMVVIRGNSIIMLESL 476
N + G L GFD ++NL LD +VE + K +G ++++G +I+++ +L
Sbjct: 38 NDNLRIQGKLAGFDEYLNLVLDRAVEYDRKTKATKELGKILLKGENIVLVRTL 90
>UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=2; Pezizomycotina|Rep: U6 snRNA-associated Sm-like
protein LSm6 - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 83
Score = 38.3 bits (85), Expect = 0.16
Identities = 16/62 (25%), Positives = 36/62 (58%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSII 461
L + + +++KLN+G G L+ D +MN+ L+++ E ++ + G +RGN+++
Sbjct: 18 LGEIIGNMVTVKLNSGVIYKGELQSVDGYMNIALEKAEEWVAGQKKRSYGDAFVRGNNVM 77
Query: 462 ML 467
+
Sbjct: 78 YI 79
>UniRef50_A1CDT1 Cluster: Small nuclear ribonucleoprotein SmE,
putative; n=12; Pezizomycotina|Rep: Small nuclear
ribonucleoprotein SmE, putative - Aspergillus clavatus
Length = 95
Score = 38.3 bits (85), Expect = 0.16
Identities = 15/52 (28%), Positives = 36/52 (69%), Gaps = 5/52 (9%)
Frame = +3
Query: 336 VTGVLRGFDPFMNLXLDESVE-----ECKDGQRNNVGMVVIRGNSIIMLESL 476
+ G +RGFD FMNL +D++VE + + +R +G ++++G+++ +++++
Sbjct: 43 IEGKIRGFDEFMNLVVDDAVEVRMATKTDEEKRRPLGQILLKGDNVSLIQAV 94
>UniRef50_O29885 Cluster: SnRNP, putative; n=1; Archaeoglobus
fulgidus|Rep: SnRNP, putative - Archaeoglobus fulgidus
Length = 75
Score = 38.3 bits (85), Expect = 0.16
Identities = 18/65 (27%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGR-AVTGVLRGFDPFMNLXLDESVEECKDGQR-NNVGMVVIRGNS 455
+K + K + +++ + G L G D +MNL L ++E CK ++ ++G +V+RGN+
Sbjct: 8 VKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAME-CKGEEKVRSLGEIVLRGNN 66
Query: 456 IIMLE 470
+++++
Sbjct: 67 VVLIQ 71
>UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4;
Thermoplasmatales|Rep: Putative snRNP Sm-like protein -
Thermoplasma acidophilum
Length = 83
Score = 38.3 bits (85), Expect = 0.16
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSII 461
LK + + + I + R +G+L G+D +MN+ L + E + V++RG+++I
Sbjct: 14 LKSALSRNVLIDVKGNREYSGILEGYDVYMNIVLQNASEIINGENKGVYDRVLVRGDNVI 73
Query: 462 ML 467
+
Sbjct: 74 FV 75
>UniRef50_Q5CQ90 Cluster: Small nuclear ribonucleoprotein U6; n=1;
Cryptosporidium parvum Iowa II|Rep: Small nuclear
ribonucleoprotein U6 - Cryptosporidium parvum Iowa II
Length = 160
Score = 37.9 bits (84), Expect = 0.21
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNN---VGMVVIRGN 452
L++ +DK++ + L GR TG+ R FD + +L L+ S E + N G ++ RG+
Sbjct: 46 LEEDLDKEIYVVLRDGRQFTGIFRSFDQYGSLCLERSFEVFSNNDCYNEIYQGCMIFRGD 105
Query: 453 SIIM 464
++++
Sbjct: 106 NLML 109
>UniRef50_Q4MZX3 Cluster: Small nuclear ribonucleoprotein, putative;
n=2; Theileria|Rep: Small nuclear ribonucleoprotein,
putative - Theileria parva
Length = 91
Score = 37.9 bits (84), Expect = 0.21
Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 336 VTGVLRGFDPFMNLXLDESVE-ECKDGQRNNVGMVVIRGNSIIMLES 473
+ G +RGFD +MN+ LD + E K + +VG ++++G+ + ++ +
Sbjct: 41 IEGTIRGFDEYMNMVLDNATEVHVKKNVKKDVGRILLKGDCMTLISA 87
>UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=5; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm5 - Saccharomyces cerevisiae (Baker's yeast)
Length = 93
Score = 37.5 bits (83), Expect = 0.28
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVE---ECKDGQRN-----NVGMV 437
+ K +++K+ I L + R G L GFD F+N+ L+++VE + +D RN + G +
Sbjct: 12 IDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRNEKVMQHHGRM 71
Query: 438 VIRGNSIIML 467
++ GN+I +L
Sbjct: 72 LLSGNNIAIL 81
>UniRef50_Q9Y4Y9 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=27; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm5 - Homo sapiens (Human)
Length = 91
Score = 37.5 bits (83), Expect = 0.28
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = +3
Query: 261 SKAHPPEL-KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDE--SVEECKDGQR-NNV 428
S+ P EL K + ++ I + + + + G L GFD F+N+ L++ E +G+R +
Sbjct: 10 SQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKL 69
Query: 429 GMVVIRGNSIIML 467
+++ GN+I ML
Sbjct: 70 DQILLNGNNITML 82
>UniRef50_Q755T6 Cluster: AER432Cp; n=1; Eremothecium gossypii|Rep:
AER432Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 158
Score = 37.1 bits (82), Expect = 0.37
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +3
Query: 267 AHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEE 401
+H LK +D KL + GR G L FD MNL L + VEE
Sbjct: 6 SHRSTLKDLIDYKLRVLSQDGRVYVGTLLAFDAHMNLVLADCVEE 50
>UniRef50_Q24297 Cluster: Small nuclear ribonucleoprotein F; n=7;
Fungi/Metazoa group|Rep: Small nuclear ribonucleoprotein
F - Drosophila melanogaster (Fruit fly)
Length = 88
Score = 37.1 bits (82), Expect = 0.37
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +3
Query: 276 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNS 455
P L K + +KL G+ G L D +MN+ L + E + N+G V+IR N+
Sbjct: 11 PFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGNLGEVLIRCNN 70
Query: 456 IIMLESL 476
++ ++ +
Sbjct: 71 VLYIKGM 77
>UniRef50_P57743 Cluster: U6 snRNA-associated Sm-like protein LSm3;
n=2; Saccharomyces cerevisiae|Rep: U6 snRNA-associated
Sm-like protein LSm3 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 89
Score = 37.1 bits (82), Expect = 0.37
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESV--------EECKDGQRNNVGMV 437
LK +D+++ IKL R + G L+ FD N+ L ++V EE + +R MV
Sbjct: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER-RCEMV 66
Query: 438 VIRGNSIIMLES 473
IRG+++ ++ +
Sbjct: 67 FIRGDTVTLIST 78
>UniRef50_A7AQW8 Cluster: Small nuclear ribonucleoprotein F,
putative; n=1; Babesia bovis|Rep: Small nuclear
ribonucleoprotein F, putative - Babesia bovis
Length = 94
Score = 36.7 bits (81), Expect = 0.48
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 276 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNV--GMVVIRG 449
P L K + + + + L G G L+ FD +MN+ L E+ EE ++G G ++IR
Sbjct: 26 PFLAKLVGQNVFVTLKWGMEYKGFLKSFDSYMNIEL-ENAEEWENGVMKGTLGGTILIRC 84
Query: 450 NSIIMLES 473
N+++ + +
Sbjct: 85 NNVLHIRA 92
>UniRef50_Q6CGS0 Cluster: Similar to sp|P47017 Saccharomyces
cerevisiae YJL124c LSM1 Sm-like; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P47017 Saccharomyces
cerevisiae YJL124c LSM1 Sm-like - Yarrowia lipolytica
(Candida lipolytica)
Length = 144
Score = 36.7 bits (81), Expect = 0.48
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 294 MDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEE 401
+D+K+ + L GR G+LR FD F NL L ++ E+
Sbjct: 24 IDRKVVVTLRGGRKFFGILRSFDQFANLVLQDTYEK 59
>UniRef50_P34659 Cluster: Probable small nuclear ribonucleoprotein
F; n=13; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein F - Caenorhabditis elegans
Length = 85
Score = 36.7 bits (81), Expect = 0.48
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +3
Query: 276 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNS 455
P L K + KL G GVL D +MNL L + E + N+G ++IR N+
Sbjct: 11 PFLNSLTGKFVVCKLKWGMEYKGVLVAVDSYMNLQLAHAEEYIDGNSQGNLGEILIRCNN 70
Query: 456 II 461
++
Sbjct: 71 VL 72
>UniRef50_A2X0E3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 36.3 bits (80), Expect = 0.64
Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 351 RGFDPFMNLXLDESVE-ECKDGQRNNVGMVVIRGNSIIML 467
+GFD +MNL LDE+ E K R ++G ++++G++I ++
Sbjct: 97 KGFDEYMNLVLDEAEEINIKKDTRKSLGRILLKGDNITLM 136
>UniRef50_Q7QZM9 Cluster: GLP_680_47464_47838; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_680_47464_47838 - Giardia lamblia
ATCC 50803
Length = 124
Score = 36.3 bits (80), Expect = 0.64
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Frame = +3
Query: 300 KKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDG------QRNNVGMVVIRGNSII 461
K + ++L +GR +TGVL+ +D +NL E+ E ++ +R N ++RG+++I
Sbjct: 62 KPVLVQLRSGRFITGVLKAYDRHLNLVFSEATETWEENGIEYTEERKN---FMLRGDNVI 118
Query: 462 MLES 473
M+ S
Sbjct: 119 MVVS 122
>UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core,
putative; n=2; Culicidae|Rep: Small nuclear
ribonucleoprotein, core, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 162
Score = 36.3 bits (80), Expect = 0.64
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDG----QRNNVGMVVIRG 449
L+ +++ +SI GR G L+GFD +N+ LDES E ++ +G+ +IRG
Sbjct: 71 LESYVNTTVSIITADGRNFVGTLKGFDQTINIILDESHERVYSMNAGIEQVVLGLHIIRG 130
Query: 450 NSIIMLESL 476
+++ ++ L
Sbjct: 131 DNVAVIGQL 139
>UniRef50_A2E014 Cluster: Sm protein; n=2; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 84
Score = 36.3 bits (80), Expect = 0.64
Identities = 21/84 (25%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Frame = +3
Query: 258 MSKAHPPE--LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEEC----KDG-- 413
MS+ P+ ++ M+K++ +K+ G+ + GVL +D N+ L + +E K+G
Sbjct: 1 MSEKPMPQDYIRLSMEKRVKVKVQEGQELEGVLHAYDEHYNIILGDVLESIMGLDKNGKF 60
Query: 414 ---QRNNVGMVVIRGNSIIMLESL 476
++N + M+ +RG+ I+ + ++
Sbjct: 61 IPVRQNQIDMLFVRGDRIVSIATI 84
>UniRef50_Q8SRU9 Cluster: U6 snRNA-ASSOCIATED SMALL
RIBONUCLEOPROTEIN; n=1; Encephalitozoon cuniculi|Rep: U6
snRNA-ASSOCIATED SMALL RIBONUCLEOPROTEIN -
Encephalitozoon cuniculi
Length = 102
Score = 36.3 bits (80), Expect = 0.64
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQR---NNVGMVVIRG 449
+ +K++++++ + L GR + GV++ FD F ++ LD +E R + +IRG
Sbjct: 11 DYEKYLEQEVVVMLRDGRYLYGVMKSFDQFNSVTLDGVIERIFHDTRYAERRHELFIIRG 70
Query: 450 NSIIML 467
+I M+
Sbjct: 71 ENITMI 76
>UniRef50_A3BPN8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 111
Score = 35.9 bits (79), Expect = 0.84
Identities = 15/45 (33%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +3
Query: 336 VTGVLRGFDPFMNLXLDESVE-ECKDGQRNNVGMVVIRGNSIIML 467
+ G + GFD +MNL LD++ E K R ++G ++++G++I ++
Sbjct: 30 IEGRIIGFDEYMNLVLDDAEEINVKKDTRKSLGRILLKGDNITLM 74
>UniRef50_A0CCJ3 Cluster: Chromosome undetermined scaffold_167,
whole genome shotgun sequence; n=3;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_167, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 138
Score = 35.9 bits (79), Expect = 0.84
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Frame = +3
Query: 288 KFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEEC--KDG-----QRNNVGMVVIR 446
+++D ++ I L GR + G FD +N+ L E E K G + +GM+++R
Sbjct: 9 QWIDYRVRITLGDGRMLVGTFLAFDKHLNVILSECEEYRIRKQGIHEIETKRTLGMIIVR 68
Query: 447 GNSIIMLES 473
G++II L +
Sbjct: 69 GDNIISLSA 77
>UniRef50_Q74ZR8 Cluster: AGR130Wp; n=2; Saccharomycetales|Rep:
AGR130Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 80
Score = 35.9 bits (79), Expect = 0.84
Identities = 18/64 (28%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVE-ECKD-GQRNNVGMVVIRGNS 455
+ + +++ + + L + R TG L GFD F+N+ +++ VE + D + + G +++ GN+
Sbjct: 9 IDRAINQPIWVLLTSNREFTGTLVGFDDFVNVVIEDVVEYDAPDRAVKRHPGRMLLSGNN 68
Query: 456 IIML 467
I +L
Sbjct: 69 ITVL 72
>UniRef50_A6R7U2 Cluster: Predicted protein; n=2;
Eurotiomycetidae|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 104
Score = 35.9 bits (79), Expect = 0.84
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 318 LNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSIIML 467
L + +G L GFD ++N+ L++ E G + + +++ GN+I ML
Sbjct: 43 LTSNSEFSGTLLGFDDYVNMVLEDVTEFDYTGSQTKLSKILLNGNNICML 92
>UniRef50_Q4JAY5 Cluster: Conserved Archaeal protein; n=4;
Sulfolobaceae|Rep: Conserved Archaeal protein -
Sulfolobus acidocaldarius
Length = 144
Score = 35.9 bits (79), Expect = 0.84
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 252 ITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFD--PFMNLXLDESVEECKDGQRNN 425
+++S+ +L +DK + +KLN + +GVL F+ PFM S+ KD N
Sbjct: 1 MSVSRRISGDLGSLLDKTIIVKLNNNKVYSGVLSSFEVSPFM-----VSLLNAKDNDNNM 55
Query: 426 VGMVVIRGNSI 458
V+I GN I
Sbjct: 56 YYKVIINGNMI 66
>UniRef50_A0D2M7 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 83
Score = 35.5 bits (78), Expect = 1.1
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3
Query: 279 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRG 449
+L+ ++K++ I+ GR V G L FD +NL LDE V E + +G+V+ RG
Sbjct: 11 KLQSHINKEVVIQFQGGRQVKGTLLSFDNQLNLVLDE-VRELP--SQRILGLVICRG 64
>UniRef50_Q701X8 Cluster: Putative uncharacterized protein; n=1;
uncultured crenarchaeote|Rep: Putative uncharacterized
protein - uncultured crenarchaeote
Length = 89
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNN 425
L++ + K + +KL R+V G ++GFD MN+ + E+ E + NN
Sbjct: 11 LQESVGKIVLVKLKGRRSVKGKIKGFDKQMNIVITEATEVIEQQSNNN 58
>UniRef50_Q0WMZ9 Cluster: Sm-like protein; n=19; Eukaryota|Rep:
Sm-like protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 88
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/73 (26%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Frame = +3
Query: 261 SKAHPPEL-KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDE--SVEECKDGQR-NNV 428
S+ P EL + + K+ + + + + G+L+GFD ++N+ L++ E +G+R +
Sbjct: 6 SQLLPSELIDRCIGSKIWVIMKGDKELVGILKGFDVYVNMVLEDVTEYEITAEGRRVTKL 65
Query: 429 GMVVIRGNSIIML 467
+++ GN+I +L
Sbjct: 66 DQILLNGNNIAIL 78
>UniRef50_A6S4U0 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 157
Score = 35.1 bits (77), Expect = 1.5
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 285 KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLD--ESVEECKDGQRNNVGMVVIRGNSI 458
K +D +++++L + G+L+ D ++N+ LD + VEE K ++V V IRG+ +
Sbjct: 67 KTLVDHEVTVELKNDIQIKGILKSVDQYLNIKLDDIQVVEELKYPHLSSVKNVFIRGSVV 126
>UniRef50_A3FQK4 Cluster: Small nuclear ribonucleoprotein, putative;
n=1; Cryptosporidium parvum Iowa II|Rep: Small nuclear
ribonucleoprotein, putative - Cryptosporidium parvum
Iowa II
Length = 92
Score = 34.7 bits (76), Expect = 2.0
Identities = 17/45 (37%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Frame = +3
Query: 342 GVLRGFDPFMNLXLDESVE--ECKDGQR-NNVGMVVIRGNSIIML 467
GV++GFD +MN+ LD++ E K+ +R +VG +++RG +I ++
Sbjct: 44 GVIQGFDEYMNIVLDQASEVYTKKEVRRETSVGQLLLRGENISLI 88
>UniRef50_Q5KN63 Cluster: Sm-like protein, putative; n=1;
Filobasidiella neoformans|Rep: Sm-like protein, putative
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 95
Score = 34.7 bits (76), Expect = 2.0
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 13/75 (17%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDES------VEECKDGQ-------RN 422
+K + +++ IKL R VTGVL +D MN+ + ++ V+ ++GQ R
Sbjct: 16 VKLALGERVLIKLRGDRIVTGVLHAYDAHMNVVISQAEESIHVVDVTEEGQPLPPRIERR 75
Query: 423 NVGMVVIRGNSIIML 467
M+ +RG+ +I+L
Sbjct: 76 TAEMLFVRGDGVILL 90
>UniRef50_Q4MZU2 Cluster: U6 snRNA-associated Sm-like protein LSm8,
putative; n=2; Piroplasmida|Rep: U6 snRNA-associated
Sm-like protein LSm8, putative - Theileria parva
Length = 94
Score = 34.3 bits (75), Expect = 2.6
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 276 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEEC--KDG--QRNNVGMVVI 443
P L++F++ + + GR GVL+GFD NL L +E D + +G+ ++
Sbjct: 3 PILEQFIECSVFVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELELGIYLL 62
Query: 444 RGNSIIML 467
RG++I+++
Sbjct: 63 RGDNIVLV 70
>UniRef50_Q8SQK1 Cluster: U6 snRNA-ASSOCIATED RIBONUCLEOPROTEIN;
n=1; Encephalitozoon cuniculi|Rep: U6 snRNA-ASSOCIATED
RIBONUCLEOPROTEIN - Encephalitozoon cuniculi
Length = 94
Score = 34.3 bits (75), Expect = 2.6
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 303 KLSIKLNAGRAVTGVLRGFDPFMNLX-LDESVEECKDGQRNNVGMVVIRGNSI 458
++S+ L AG V+G L G DP++NL LD + G +++ + IRG+SI
Sbjct: 14 RVSVMLKAGVYVSGRLGGIDPYLNLSLLDVRILSSHPG-LSSISVCSIRGSSI 65
>UniRef50_Q4PB34 Cluster: Putative uncharacterized protein; n=3;
Dikarya|Rep: Putative uncharacterized protein - Ustilago
maydis (Smut fungus)
Length = 136
Score = 34.3 bits (75), Expect = 2.6
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +3
Query: 321 NAGRAVTGVLRGFDPFMNLXL--DESVEECKDGQRNNVGMVVIRGNSII 461
N + G + GFD FMN+ L E V KD +R +G ++++G++I+
Sbjct: 32 NVDFRIEGKIIGFDEFMNVTLADAEEVWTKKDNKRVELGRILLKGDNIV 80
>UniRef50_UPI0000499412 Cluster: U6 snRNA-associated Sm-like
protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep: U6
snRNA-associated Sm-like protein - Entamoeba histolytica
HM-1:IMSS
Length = 71
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 285 KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNS 455
K+ + + SIKLN G G + D MN+ L+ ++E + N IRGN+
Sbjct: 14 KEALFHECSIKLNDGTIFKGKMTLIDGLMNIVLENAIEYINGNKDNEYPECFIRGNN 70
>UniRef50_O22305 Cluster: Peptide transporter; n=1; Lotus
japonicus|Rep: Peptide transporter - Lotus japonicus
Length = 574
Score = 33.5 bits (73), Expect = 4.5
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +1
Query: 151 VKFIDKIRWVGNSSNIQKSTTITLIPYYNILKS 249
V IDK+ W+GN+ N +S IT++P+++++ +
Sbjct: 505 VTMIDKLNWIGNNLNDSQS-RITIMPFFSVISA 536
>UniRef50_Q7R4T3 Cluster: GLP_440_43387_42998; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_440_43387_42998 - Giardia lamblia
ATCC 50803
Length = 129
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +3
Query: 276 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNS 455
P+L ++ L++ G TG L D MN+ + K+ R ++G+VV+RG
Sbjct: 5 PKLVNYVGSPLTVHALNGYVYTGTLLAIDRHMNMVISSCCCRVKESAR-SLGLVVLRGEE 63
Query: 456 I 458
+
Sbjct: 64 V 64
>UniRef50_Q5CME6 Cluster: Similar to small nuclear
ribonucleoprotein; n=2; Cryptosporidium|Rep: Similar to
small nuclear ribonucleoprotein - Cryptosporidium
hominis
Length = 139
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/67 (25%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVE--ECKDGQ-----RNNVGMVV 440
++K+++ ++ + + R + G L FD MNL L + E K G+ + ++G+++
Sbjct: 1 MQKYINYRIRVTVQDDRVMVGNLMAFDRHMNLVLSDCQEYRRVKKGEEPKELKRSLGLIM 60
Query: 441 IRGNSII 461
+RG +I+
Sbjct: 61 LRGENIV 67
>UniRef50_A7ARJ0 Cluster: Small nuclear ribonucleoprotein F,
putative; n=1; Babesia bovis|Rep: Small nuclear
ribonucleoprotein F, putative - Babesia bovis
Length = 83
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +3
Query: 300 KKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNS 455
K + +KLN G G+L D MNL ++ + E C G IRGN+
Sbjct: 16 KPVIVKLNNGTRFRGLLSSLDDRMNLAMENTKEYCDGELVKAYGDSFIRGNN 67
>UniRef50_Q6CWY1 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome B of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 191
Score = 33.5 bits (73), Expect = 4.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 264 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEE 401
K +L +D ++ + + GR G L FD +MNL + + VEE
Sbjct: 7 KKKETKLSDLIDYRIRVATHDGRVYIGQLMAFDAYMNLVMGDCVEE 52
>UniRef50_UPI00015533A8 Cluster: PREDICTED: similar to Snrpf
protein; n=1; Mus musculus|Rep: PREDICTED: similar to
Snrpf protein - Mus musculus
Length = 209
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 276 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNS 455
P L K + +KL G G L D +MN+ L + E ++G V+IR N+
Sbjct: 132 PFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNN 191
Query: 456 IIMLESL 476
++ + +
Sbjct: 192 VLYIRGV 198
>UniRef50_A3QER8 Cluster: DNA polymerase III, alpha subunit; n=1;
Shewanella loihica PV-4|Rep: DNA polymerase III, alpha
subunit - Shewanella loihica (strain BAA-1088 / PV-4)
Length = 1078
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 267 AHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVI 443
A P E+ + L+ GR V LRG PF+ + +C+ GQ +V VV+
Sbjct: 937 APPSEMAAMQSDYRHLGLSLGRHVMAQLRGLAPFVGCRHASELADCRHGQLVHVAGVVV 995
>UniRef50_Q3LWL6 Cluster: MRNA splicing protein; n=1; Bigelowiella
natans|Rep: MRNA splicing protein - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 80
Score = 33.1 bits (72), Expect = 6.0
Identities = 13/43 (30%), Positives = 28/43 (65%)
Frame = +3
Query: 330 RAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSI 458
+ + G + GFD +MN+ L E+V + K+ ++ +++++GN I
Sbjct: 31 KTINGKIIGFDEYMNIVLSEAVAKNKEVEKIK-NLILVKGNQI 72
>UniRef50_Q9W087 Cluster: CG2021-PA; n=14; Eukaryota|Rep: CG2021-PA
- Drosophila melanogaster (Fruit fly)
Length = 95
Score = 33.1 bits (72), Expect = 6.0
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVE---ECKDG-QRNNVGMVVIRG 449
L+ +++ +SI GR G L+GFD +N+ +DE E G ++ +G+ +IRG
Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRG 63
Query: 450 NSIIML 467
++I ++
Sbjct: 64 DNIAVI 69
>UniRef50_Q8MYW8 Cluster: RE61341p; n=1; Drosophila
melanogaster|Rep: RE61341p - Drosophila melanogaster
(Fruit fly)
Length = 114
Score = 33.1 bits (72), Expect = 6.0
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2
Query: 251 HYNVKSTSTRIEKIHGQKIVNKAECGSRCYRCVARF*SIHE 373
H NV+ S R EKIHGQ + E +R R AR S+HE
Sbjct: 24 HQNVEGPSPRGEKIHGQAHDAETERRTRGDRYFARLRSLHE 64
>UniRef50_A2DQD7 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 107
Score = 33.1 bits (72), Expect = 6.0
Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQR---NNVGMVVIRGN 452
L++ ++ +++ G + G+L +D MNL L + E +D Q+ +G++V+RG
Sbjct: 8 LQRLLNGLVTVTTVEGLSFQGILMNYDEHMNLVLRQVEEIPQDNQQREPKRIGLMVMRGC 67
Query: 453 SIIMLESL 476
++ +E++
Sbjct: 68 NVSTVEAV 75
>UniRef50_Q4P8W1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 382
Score = 33.1 bits (72), Expect = 6.0
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +3
Query: 261 SKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEE--CKDGQR--NNV 428
SKA +K F+ + + + GRA GV D N+ L ++ E +G+ NV
Sbjct: 10 SKAVETIIKNFVGRTSIVHIPDGRAFRGVFICVDSGKNIILADTDETRLTPEGRTTIRNV 69
Query: 429 GMVVIRGNSIIMLESLH 479
GMV+I G ++ +E H
Sbjct: 70 GMVMIPGEYVVKVEVQH 86
>UniRef50_P62306 Cluster: Small nuclear ribonucleoprotein F; n=20;
Euteleostomi|Rep: Small nuclear ribonucleoprotein F -
Homo sapiens (Human)
Length = 86
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 276 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNS 455
P L K + +KL G G L D +MN+ L + E ++G V+IR N+
Sbjct: 9 PFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNN 68
Query: 456 IIMLESL 476
++ + +
Sbjct: 69 VLYIRGV 75
>UniRef50_Q12330 Cluster: Small nuclear ribonucleoprotein E; n=3;
Saccharomycetaceae|Rep: Small nuclear ribonucleoprotein
E - Saccharomyces cerevisiae (Baker's yeast)
Length = 94
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 8/57 (14%)
Frame = +3
Query: 327 GRAVTGVLRGFDPFMNLXLDESVE---ECKDGQRN-----NVGMVVIRGNSIIMLES 473
G + G + GFD FMN+ +DE+VE DG+ + +G ++++G++I ++ S
Sbjct: 36 GIRIKGKIVGFDEFMNVVIDEAVEIPVNSADGKEDVEKGTPLGKILLKGDNITLITS 92
>UniRef50_Q025U8 Cluster: Amidohydrolase; n=1; Solibacter usitatus
Ellin6076|Rep: Amidohydrolase - Solibacter usitatus
(strain Ellin6076)
Length = 460
Score = 32.7 bits (71), Expect = 7.9
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +2
Query: 431 DGGNSW*QYYNAGIFTQTLVHLXWAXNITNAVNVLHFSSINKYKTRI*NLVSTATAATVK 610
+GG ++AG+F V L W +N+VN+ +IN K R + S A AA K
Sbjct: 150 EGGGGKVYMFHAGLFRDVDVVLAWHPGDSNSVNLRSDLAINGAKFRFYGIASHAAAAPEK 209
>UniRef50_Q9LMB5 Cluster: F14D16.28; n=6; core eudicotyledons|Rep:
F14D16.28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPF 368
L ++DKKL + L GR + G+LR FD F
Sbjct: 72 LAAYLDKKLLVLLRDGRKLMGLLRSFDQF 100
>UniRef50_A2EQ40 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 93
Score = 32.7 bits (71), Expect = 7.9
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 264 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEEC-KDGQRNNVGMVV 440
K + LK+ ++ + N+ + G L GFD +MNL L +S E K+ R +G +
Sbjct: 17 KIYVSYLKERARLRVHLNDNSKMYMEGNLLGFDEYMNLVLGDSYEVYPKENTRVPLGTSL 76
Query: 441 IRGNSIIMLESL 476
+RG + M+ +
Sbjct: 77 LRGECVGMVHPI 88
>UniRef50_A2E8V8 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 112
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 306 LSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVIRGNSIIMLE 470
+ I LN G + G L+ + MN L V KDGQ+ +RG++I+ +
Sbjct: 18 VEIHLNTGDSYRGTLKYVEDNMNCWLTNVVHTQKDGQQIKFDKTYVRGSNILYFD 72
>UniRef50_Q6CX51 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome A of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 91
Score = 32.7 bits (71), Expect = 7.9
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNVGMVVI 443
L + + L I L+ R++TG L D NL LDE VE DG +G+V +
Sbjct: 9 LHDLLSETLYINLDQKRSLTGKLIAIDCKANLLLDEVVEN-NDGHVRKMGLVSV 61
>UniRef50_Q0UQD0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 187
Score = 32.7 bits (71), Expect = 7.9
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 312 IKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQR-NNVGMVVIRGNSI 458
++L +G + G+L D +MNL L E V+ DG + + + +RG++I
Sbjct: 77 VELKSGETLNGLLVNCDTWMNLTLREVVQTSADGDKFMRLPEIYVRGSTI 126
>UniRef50_A7F5M4 Cluster: Putative uncharacterized protein; n=4;
Pezizomycotina|Rep: Putative uncharacterized protein -
Sclerotinia sclerotiorum 1980
Length = 95
Score = 32.7 bits (71), Expect = 7.9
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQRNNV-GMVVIRGNS 455
L + ++ +KLN G L+ D +MN+ L E EE G++ V G +RGN+
Sbjct: 18 LSDIIGSRVIVKLNNSLVFKGELQSVDGYMNIAL-EKCEEWVHGKKKTVHGDAFVRGNN 75
>UniRef50_Q8U0P4 Cluster: Putative snRNP Sm-like protein; n=11;
Euryarchaeota|Rep: Putative snRNP Sm-like protein -
Pyrococcus furiosus
Length = 76
Score = 32.7 bits (71), Expect = 7.9
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 282 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLXLDESVEECKDGQ-RNNVGMVVIRGNSI 458
+ K +DK + + L G G L G+D +N+ L + E +DG+ G +VIRG+++
Sbjct: 9 IHKSLDKDVLVILKKGFEFRGKLIGYDIHLNVVL-ANAELLQDGEVVKKYGKIVIRGDNV 67
Query: 459 IML 467
+ +
Sbjct: 68 LAI 70
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,764,138
Number of Sequences: 1657284
Number of extensions: 9713699
Number of successful extensions: 20363
Number of sequences better than 10.0: 138
Number of HSP's better than 10.0 without gapping: 19898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20347
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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