Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_D18
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.2  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   6.7  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   8.9  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +1

Query: 298 LMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNPYAIIADQTLGK 432
           ++C + ++S KR G      E+ NP L +     +A + D  L +
Sbjct: 524 VLCYITSWSQKRPGAGKFTPEDINPSLCTHIIYAFATLKDHKLAE 568


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/36 (22%), Positives = 20/36 (55%)
 Frame = -1

Query: 356 RMVQQSPSRLPLKAATKHIRMIMGTPIHPVLTRALG 249
           +M+++SP+   ++  T+ I ++     HP +   +G
Sbjct: 483 KMLKESPTSEEIRQFTQEINIMKSVRQHPYIVSLIG 518


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 109 PTPKETTPLI 138
           P PKE TPLI
Sbjct: 477 PNPKEKTPLI 486


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 493 TRPKLQRGLQ*SPWTRPRXRSCRE 422
           T  ++   L  SP  RP  R+CR+
Sbjct: 230 TSDRVHAALVTSPRARPLARTCRD 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,188
Number of Sequences: 336
Number of extensions: 2518
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)