Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_D18
(653 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_54782| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_43974| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_42789| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.067
SB_32782| Best HMM Match : Aa_trans (HMM E-Value=1.7e-40) 33 0.20
SB_58414| Best HMM Match : Aa_trans (HMM E-Value=3.1e-35) 33 0.27
SB_50674| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_27382| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0) 31 1.1
SB_46723| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4) 30 1.4
SB_40988| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4) 30 1.4
SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_36678| Best HMM Match : Aa_trans (HMM E-Value=1.8e-07) 29 3.3
SB_27407| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_8486| Best HMM Match : Granulin (HMM E-Value=0) 28 5.8
SB_48790| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_27864| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_26428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/100 (28%), Positives = 52/100 (52%)
Frame = +1
Query: 211 IAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXX 390
++ + G+G+L +P A+ GW GV I+++ V F+GK L DC +R Q
Sbjct: 119 VSNLIQGTGILGVPYAVRMGGWAGVAAIVVVAWVCCFTGKLLVDCLYEESKRTGQ-RKRV 177
Query: 391 RNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
R Y + + T + +VS+ + ++G V+Y+++ A
Sbjct: 178 RENYPDVGEATWPGWGNKIVSVVQVCEMYGGIVMYIVLLA 217
>SB_54782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 46.8 bits (106), Expect = 2e-05
Identities = 34/139 (24%), Positives = 60/139 (43%)
Frame = +1
Query: 229 GSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNPYAI 408
G+G+LA+P + TG+ GV I+IL+ L+ ++GK L C L E P+ + YA
Sbjct: 41 GTGILAMPYVIRLTGYWGVAIVILVALLGNYTGKILIHC---LHENTPE-GHFNKFTYAD 96
Query: 409 IADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAAXXXXXXXXXXXXXXXXXXWYLIVVGA 588
+ + K ++V + F ++L+M W IV A
Sbjct: 97 LGEAFWPKYGRLMVHITNFFEQFSHCTLFLIMCG--TVMHHTFPDSGISESLWICIVSFA 154
Query: 589 MTPLIFFNSPKDLTFTGVI 645
+ P F + K ++ ++
Sbjct: 155 VVPCAFVRTMKHISHISIL 173
>SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1004
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/104 (23%), Positives = 52/104 (50%)
Frame = +1
Query: 199 TSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQL 378
+S + + G+G L +P ++ GW G+ I+++ V F+GK L +C + ++
Sbjct: 421 SSWNVTSMIQGTGTLGIPYSVRMGGWAGITTILILAWVCCFTGKLLIECLYSESKSTGKI 480
Query: 379 XSXXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
N Y + K + +VS+ + +FG +++Y+++ A
Sbjct: 481 KRVYTN-YPELGGAVWPKFGNHLVSVIQVCEMFGGTIMYIVLLA 523
>SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 46.8 bits (106), Expect = 2e-05
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 7/159 (4%)
Frame = +1
Query: 193 GQTSMLIAG-----EMAGSG-VLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTI 354
GQ S ++AG + GSG VL +P A+ + G+ + +I+L+ L+ ++G L DC
Sbjct: 147 GQASGILAGWNIVNVIQGSGGVLGIPFAVSQGGFAALAVIVLVGLMTLYTGVVLIDCMYE 206
Query: 355 LEERNPQLXSXXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVV-YLLMAAXXXXXXX 531
+ ++ +L R YA IA G V+V + + VV ++++
Sbjct: 207 VSPKS-RLRKRVRGSYAEIAADAWGPVGGVIVDFMTVAFCYCTCVVLFMMLGNTVFSFLK 265
Query: 532 XXXXXXXXXXXWYLIVVGAMTPLIFFNSPKDLTFTGVIA 648
YLI + PL+ + L + ++A
Sbjct: 266 SFMTLGFGLNECYLICAALLVPLVLIHQLTVLAWLSMLA 304
>SB_43974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/53 (30%), Positives = 33/53 (62%)
Frame = +1
Query: 187 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDC 345
S+ Q+ + +M G+G+L LP ++R GW V ++++ ++ ++GK L +C
Sbjct: 545 SMWQSVANLVSDMEGTGLLGLPYVILRGGWAAVMALVVVAFISYYTGKILVEC 597
>SB_42789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 1/141 (0%)
Frame = +1
Query: 229 GSGVLALPRALVRTGWIGVPI-IILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNPYA 405
G G+L +P A VR G I + I ++ +V +G L DC + R+ Q R+ Y
Sbjct: 117 GMGILGIPYA-VREGGIAAAVCIFVVAIVCDVTGILLVDCLYEISPRS-QKKKRIRSNYP 174
Query: 406 IIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAAXXXXXXXXXXXXXXXXXXWYLIVVG 585
+ + VVS+ + L+ A+++YL++ W ++
Sbjct: 175 EVGEAVWPGIGGKVVSVVQTIELYTAAMLYLIL-LTTMFSQITEKYISLSMNVWAVLCAV 233
Query: 586 AMTPLIFFNSPKDLTFTGVIA 648
A+ P +F + + +IA
Sbjct: 234 AVLPSVFITRLSLIAWMSMIA 254
>SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 34.7 bits (76), Expect = 0.067
Identities = 36/147 (24%), Positives = 62/147 (42%)
Frame = +1
Query: 64 LNMSKNGLXEPSGSQPTPKETTPLITXXXXXXXXXXXXXXLSVGQTSMLIAGEMAGSGVL 243
L+ S+ + E S T E+TPLI + L++ M G GVL
Sbjct: 192 LSCSQTDMGETSPIT-TISESTPLINSSTPIKAEHHERHGTILSSIFTLVS-TMIGGGVL 249
Query: 244 ALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNPYAIIADQT 423
+LP A + G++ ++++ L+A+ G L I+ + +N +
Sbjct: 250 SLPFAFQQGGFVMSSLVLIFVLMASTHGGFL-----IINSKK-YCQGRIKN-VEDVGRIA 302
Query: 424 LGKTXSVVVSMAIIVTLFGASVVYLLM 504
G V+ + +IVTLF SV Y ++
Sbjct: 303 FGYKGEVLTQLVLIVTLFLCSVAYWIL 329
>SB_32782| Best HMM Match : Aa_trans (HMM E-Value=1.7e-40)
Length = 440
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/92 (27%), Positives = 45/92 (48%)
Frame = +1
Query: 229 GSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNPYAI 408
G G+LALP AL + + ++++ +VA ++GK L +C L + N ++ N Y I
Sbjct: 56 GPGILALPFALSEGNGVALAALVVVPMVAFYTGKILIECLYDL-KINGRIVRVRENYYGI 114
Query: 409 IADQTLGKTXSVVVSMAIIVTLFGASVVYLLM 504
+ VVV+ ++ S+ +LM
Sbjct: 115 AREIWPRFGAHVVVASQLMSFCLLGSLYLVLM 146
>SB_58414| Best HMM Match : Aa_trans (HMM E-Value=3.1e-35)
Length = 436
Score = 32.7 bits (71), Expect = 0.27
Identities = 28/142 (19%), Positives = 57/142 (40%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNPY 402
M GSG +ALP A+ R G G IL+ ++ ++ + DC + E R+ Y
Sbjct: 56 MEGSGFVALPYAVARGGLAGALGFILVPIIFTYTAHIMVDC--LYEGGRYTEKKRVRSSY 113
Query: 403 AIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAAXXXXXXXXXXXXXXXXXXWYLIVV 582
IA + +++ + + F Y L+++ W +I+
Sbjct: 114 EEIA-TAVWPPAGYMLNTLFVFSFFDHLTSYNLVSS-SLLAGLQTPGVDISQRYWSIIIG 171
Query: 583 GAMTPLIFFNSPKDLTFTGVIA 648
+ P +F + + + + ++A
Sbjct: 172 AVVLPTLFIKTFRSIAWLSLLA 193
>SB_50674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/50 (24%), Positives = 30/50 (60%)
Frame = +1
Query: 196 QTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDC 345
Q + I+ + G+G L +P A+ + G++ + I+ + ++ ++GK + +C
Sbjct: 89 QAAWNISNLIQGTGTLGIPYAVSKGGYMALVAIVFIAVITNYTGKLIIEC 138
>SB_27382| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 30.7 bits (66), Expect = 1.1
Identities = 31/142 (21%), Positives = 55/142 (38%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNPY 402
M G+G LALP A+ R G G + ++ A++ L +C + E ++ + Y
Sbjct: 1 MEGTGFLALPYAVARGGLAGALSFAFVGILMAYTSYLLIEC--VYEGKSTK-RKRVHTSY 57
Query: 403 AIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAAXXXXXXXXXXXXXXXXXXWYLIVV 582
IA Q VS+ +I+ YL++A+ W +
Sbjct: 58 RDIA-QAAWLPAGGTVSILLIINWLNLMTGYLVVAS-SLLVDVEIPGLILTQSSWAALAG 115
Query: 583 GAMTPLIFFNSPKDLTFTGVIA 648
+ P +F S K + + I+
Sbjct: 116 VCVFPALFCKSLKSMAWVSCIS 137
>SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 689
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/75 (18%), Positives = 32/75 (42%)
Frame = -3
Query: 324 TEGRHQAHQNDNGNTNPSSPDKGSRESQDSAACHLSGDQHTRLPNAESAVLTTTVAIFAT 145
+ + ++ N+N N+N +S + S ++ + + + ++ + +A TTTV + T
Sbjct: 378 SNSNNNSNNNNNNNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSTVTATTTTTVTVTTT 437
Query: 144 LCNEXXXXXXXXLTA 100
TA
Sbjct: 438 ATATATATATATATA 452
>SB_46723| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4)
Length = 163
Score = 30.3 bits (65), Expect = 1.4
Identities = 27/108 (25%), Positives = 47/108 (43%)
Frame = +1
Query: 187 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEER 366
S + +M M G+G LALP A+ R G G + ++ A++ L +C + E +
Sbjct: 20 STWRVTMNTINYMEGTGFLALPYAVARGGLAGALSFAFVGILMAYTSYLLIEC--VYEGK 77
Query: 367 NPQLXSXXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
+ + Y IA Q VS+ +I+ YL++A+
Sbjct: 78 STK-RKRVHTSYRDIA-QAAWLPAGGTVSILLIINWLNLMTGYLVVAS 123
>SB_40988| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4)
Length = 178
Score = 30.3 bits (65), Expect = 1.4
Identities = 27/108 (25%), Positives = 47/108 (43%)
Frame = +1
Query: 187 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEER 366
S + +M M G+G LALP A+ R G G + ++ A++ L +C + E +
Sbjct: 35 STWRVTMNTINYMEGTGFLALPYAVARGGLAGALSFAFVGILMAYTSYLLIEC--VYEGK 92
Query: 367 NPQLXSXXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
+ + Y IA Q VS+ +I+ YL++A+
Sbjct: 93 STK-RKRVHTSYRDIA-QAAWLPAGGTVSILLIINWLNLMTGYLVVAS 138
>SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDC 345
M G+G LALP A+ R G G IL+ ++ A++ DC
Sbjct: 889 MEGTGFLALPYAVSRGGIAGALGFILVPIILAYTAYISVDC 929
>SB_36678| Best HMM Match : Aa_trans (HMM E-Value=1.8e-07)
Length = 956
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 229 GSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNPYAI 408
G+G+L P+A + G I + I + ++ +G + I+ S RN I
Sbjct: 323 GAGILNFPQAFGKAGGITAAMSIELVMLVFITGS-----FVIMAYCANMCGS--RNYQEI 375
Query: 409 IADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
+ D LG ++ + +++ + G+S+ YL++ A
Sbjct: 376 VRDM-LGTKAYLISEVFVLLYMLGSSIAYLILIA 408
>SB_27407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 187 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDC 345
S + +M M G+G LALP A+ R G G + ++ A++ L +C
Sbjct: 35 STWRVTMNTINYMEGTGFLALPYAVARGGLAGALSFAFVGILMAYTSYLLIEC 87
>SB_8486| Best HMM Match : Granulin (HMM E-Value=0)
Length = 878
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -3
Query: 312 HQAHQNDNGNTNPSSPDKGSRESQDSAACHLSGDQH--TRLPNA 187
H QN N PDK S+ + C LS DQ+ LPNA
Sbjct: 183 HLRKQNKNILGTTVCPDKASKCPDGNTCCKLSSDQYGCCPLPNA 226
>SB_48790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = +3
Query: 420 NSRQDLXRGRVHGDHCNPLWSFGRVPADGSSXHRTTPTHSDPNIDHLHLVPDRGR 584
NSR R+ D L R+ D S R P HS DH +VPDR R
Sbjct: 47 NSRIIPDHSRIIPDRSRILPDHSRIIPDRS---RILPDHSQIIPDHSRIVPDRSR 98
>SB_27864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 187 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDC 345
S + +M M G+G LALP A+ R G G + ++ A++ L +C
Sbjct: 35 STWRVTMNTINYMEGTGFLALPYAVSRGGLAGALSFAFVGILMAYTSYLLIEC 87
>SB_26428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = +3
Query: 474 LWSFGRVPADGSSXHRTTPTHSDPNIDHLHLVPDRGRSHD 593
+W + P R+ P H D + +PDR +HD
Sbjct: 641 VWRRKKRPGSSGPKTRSQPNHYDTEGQEQYAIPDRRSAHD 680
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,604,501
Number of Sequences: 59808
Number of extensions: 364793
Number of successful extensions: 1277
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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