Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_D18
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125971-5|AAD14765.1|  484|Caenorhabditis elegans Hypothetical ...    87   8e-18
AL021474-3|CAD54163.1|  519|Caenorhabditis elegans Hypothetical ...    86   2e-17
AC024842-7|AAF59620.1|  457|Caenorhabditis elegans Hypothetical ...    72   3e-13
AL034393-17|CAA22315.1|  503|Caenorhabditis elegans Hypothetical...    70   2e-12
U23518-2|AAC70884.4|  496|Caenorhabditis elegans Hypothetical pr...    64   6e-11
U00055-6|AAA50724.1|  494|Caenorhabditis elegans Hypothetical pr...    62   3e-10
AF025468-4|AAB71045.1|  449|Caenorhabditis elegans Hypothetical ...    33   0.13 
U13642-8|AAG00040.1|  428|Caenorhabditis elegans Similar to tran...    30   1.6  
U13642-7|AAZ32791.1|  446|Caenorhabditis elegans Similar to tran...    30   1.6  
AL021481-5|CAA16336.2|  455|Caenorhabditis elegans Hypothetical ...    30   1.6  
U28971-1|AAA68376.2|  551|Caenorhabditis elegans Egg sterile (un...    29   2.2  
Z47074-1|CAA87375.2|  851|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U23523-8|AAC46563.1|   87|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>AF125971-5|AAD14765.1|  484|Caenorhabditis elegans Hypothetical
           protein Y4C6B.2a protein.
          Length = 484

 Score = 87.4 bits (207), Expect = 8e-18
 Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
 Frame = +1

Query: 184 LSVGQTSMLIAGEMAGSGVLALPRALVRTGWI-GVPIIILMCLVAAFSGKRLGDCWTILE 360
           +S+  T++ I GE AG G++ALP A+V TG + G  ++++  +V  ++G  L + WTIL+
Sbjct: 11  MSILVTALFIVGETAGGGLIALPTAIVSTGAVTGAFLLLVAAVVCTYTGILLAENWTILQ 70

Query: 361 ERNPQLXSXXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAAXXXXXXXXXX 540
           E  P+     R PY  +  + +G   +  VS  + VT FG +VV++L+AA          
Sbjct: 71  ELYPEYRDHCRKPYPAMGLRAIGPKFAHFVSAMLQVTQFGTAVVFVLLAAKNGENMLHAN 130

Query: 541 XXXXXXXXWYLIVVGAMT-PLIFFNSPKDLTFTGVIA 648
                   + +++VG +  P     SPKD  +  V A
Sbjct: 131 FGTHVSFCYMILIVGLLVFPFTLPKSPKDFWYAVVAA 167


>AL021474-3|CAD54163.1|  519|Caenorhabditis elegans Hypothetical
           protein Y32F6A.4 protein.
          Length = 519

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
 Frame = +1

Query: 199 TSMLIAGEMAGSGVLALPRALVRTG-WIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQ 375
           T + + G++AG G++ALP A+++   W G+ + +++  V  ++   LG  W IL    P+
Sbjct: 60  TGLFVVGDLAGGGIVALPTAIIQAEFWTGLIVCVILIGVVTYTAYVLGLSWNILLSTWPE 119

Query: 376 LXSXXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA-XXXXXXXXXXXXXX 552
                R PY  I  + +GKT  ++VS+ I VT F  SVVYLL+A+               
Sbjct: 120 YRHHCRKPYPEIGGRAMGKTCQLLVSICIDVTQFMISVVYLLLASKNIMNMIIAFSGTHI 179

Query: 553 XXXXWYLIVVGAMTPLIFFNSPKDLTFTGVIA 648
                 LIV   + PL F  SP+D  +  VIA
Sbjct: 180 SFCILILIVATCLLPLCFLKSPQDFWWAVVIA 211


>AC024842-7|AAF59620.1|  457|Caenorhabditis elegans Hypothetical
           protein Y59H11AR.4 protein.
          Length = 457

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
 Frame = +1

Query: 217 GEMAGSGVLALPRALVRTGWIGVPI-IILMCLVAAFSGKRLGDCWTILEERNPQLXSXXR 393
           GE AGSG++ALP A+   G++G  I +I+MCL+  ++   LG+ W I++ R  +     R
Sbjct: 16  GETAGSGLVALPSAMQSLGFMGGTITLIVMCLITYYTATLLGNNWIIMKTRWSEYSEHCR 75

Query: 394 NPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
           NPY  +A + LG    +  +     T+FG + V+ L+AA
Sbjct: 76  NPYPEMAHKALGTWMGMTTNFCTYFTVFGGTAVFSLLAA 114


>AL034393-17|CAA22315.1|  503|Caenorhabditis elegans Hypothetical
           protein Y18D10A.23 protein.
          Length = 503

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
 Frame = +1

Query: 202 SMLIAGEMAGSGVLALPRALVRTGWI-GVPIIILMCLVAAFSGKRLGDCWTILEERNPQL 378
           ++ I G+M G+G+++LP AL R+G I G  +I+L  + + ++G +LG+ W +++ R P+ 
Sbjct: 45  AVFIVGDMMGAGMISLPLALGRSGLIAGCVLILLASIFSGYTGIQLGENWEMMQIRWPKY 104

Query: 379 XSXXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAAXXXXXXXXXXXXXXXX 558
            +  R PY  +A + LG     VV++ ++V+ F  + V LL++A                
Sbjct: 105 RTHCRRPYPEMAYRALGNWARQVVAVCLVVSQFLIACVLLLISAENFTNLLNTFFHLHLD 164

Query: 559 XXWYLIVVG-AMTPLIFFNSPKDLTFTGVIA 648
              +++ +   + P     SP D     VI+
Sbjct: 165 FCVFIVAIALVLWPFSLLQSPMDFWQLAVIS 195


>U23518-2|AAC70884.4|  496|Caenorhabditis elegans Hypothetical
           protein F21D12.3 protein.
          Length = 496

 Score = 64.5 bits (150), Expect = 6e-11
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
 Frame = +1

Query: 202 SMLIAGEMAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQL 378
           ++ I  +M G GV+A+P A   +G  +G+ I++ + +   ++G  LG  W  + ERNP +
Sbjct: 50  AIFIIADMVGGGVVAMPVAFKLSGLPMGILIMLTVAVSFEYTGYLLGKVWNKIMERNPHI 109

Query: 379 XSXXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
               R P+  +A +T+G       S+   VT FG SVVYLL++A
Sbjct: 110 -GVCRKPFPEMAKRTMGTNMQRFTSVLGNVTQFGVSVVYLLLSA 152


>U00055-6|AAA50724.1|  494|Caenorhabditis elegans Hypothetical
           protein R02F2.8 protein.
          Length = 494

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
 Frame = +1

Query: 202 SMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFS-GKRLGDCWT--ILEERNP 372
           ++ I GE AG G++AL  AL   G I  P +IL+ L + FS    L  CWT  I++ R P
Sbjct: 30  AIFIIGETAGGGMIALSYALTSMGLI--PGLILLSLCSIFSLYTALELCWTWKIMQNRWP 87

Query: 373 QLXSXXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAAXXXXXXXXXXXXXX 552
           +     R PY  +A +T+G+     ++  I +T  G + V +L+AA              
Sbjct: 88  EYRDHCRKPYGEMAYRTIGRKMRSFIAFMICITQIGFATVLVLLAAKNLSILLHFFFSLD 147

Query: 553 XXXXWYLIVVG-AMTPLIFFNSP 618
               + +++VG A+ P     SP
Sbjct: 148 INQCYLILIVGLAVWPATMLPSP 170


>AF025468-4|AAB71045.1|  449|Caenorhabditis elegans Hypothetical
           protein T27A1.5 protein.
          Length = 449

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 13/39 (33%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = +1

Query: 223 MAGSGVLALPRALVRTG-WIGVPIIILMCLVAAFSGKRL 336
           M G+G+L+LP A   +G W+G+ ++  +CL+  +  ++L
Sbjct: 52  MMGTGMLSLPLAFKHSGIWLGLILLCFICLICIYCTRQL 90


>U13642-8|AAG00040.1|  428|Caenorhabditis elegans Similar to
           transporter of divalentcations protein 1, isoform a
           protein.
          Length = 428

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/53 (28%), Positives = 19/53 (35%)
 Frame = -3

Query: 591 HGSDHDQVPSANGQCWDQSE*ELFDDXSCHQQVHDRSSKEGYNDRHGHDHAXG 433
           HG  HD     +    D    +       H +     S  G ND HGH H+ G
Sbjct: 361 HGHSHDHNDHGHSHGHDDHGHDSHGHSHDHNEHDHGHSHGGNNDNHGHSHSAG 413



 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = -3

Query: 594 SHGSDHDQVPSANGQCWDQSE*ELFDDXSCHQQVHDRSSKEGYNDRHGHDH 442
           SHG D D    ++G   D +E +       +   H  S   G ++ HGH H
Sbjct: 373 SHGHD-DHGHDSHGHSHDHNEHDHGHSHGGNNDNHGHSHSAGSDNHHGHSH 422


>U13642-7|AAZ32791.1|  446|Caenorhabditis elegans Similar to
           transporter of divalentcations protein 1, isoform b
           protein.
          Length = 446

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/53 (28%), Positives = 19/53 (35%)
 Frame = -3

Query: 591 HGSDHDQVPSANGQCWDQSE*ELFDDXSCHQQVHDRSSKEGYNDRHGHDHAXG 433
           HG  HD     +    D    +       H +     S  G ND HGH H+ G
Sbjct: 379 HGHSHDHNDHGHSHGHDDHGHDSHGHSHDHNEHDHGHSHGGNNDNHGHSHSAG 431



 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = -3

Query: 594 SHGSDHDQVPSANGQCWDQSE*ELFDDXSCHQQVHDRSSKEGYNDRHGHDH 442
           SHG D D    ++G   D +E +       +   H  S   G ++ HGH H
Sbjct: 391 SHGHD-DHGHDSHGHSHDHNEHDHGHSHGGNNDNHGHSHSAGSDNHHGHSH 440


>AL021481-5|CAA16336.2|  455|Caenorhabditis elegans Hypothetical
           protein Y43F4B.7 protein.
          Length = 455

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/34 (35%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = +1

Query: 223 MAGSGVLALPRALVRTG-WIGVPIIILMCLVAAF 321
           M G+G+L+LP A   +G ++G+ + +L+CL+  +
Sbjct: 62  MLGTGLLSLPLAFKHSGLFLGLILTVLICLICLY 95


>U28971-1|AAA68376.2|  551|Caenorhabditis elegans Egg sterile
           (unfertilizable) protein1 protein.
          Length = 551

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = +1

Query: 406 IIAD---QTLGKTXSVVVSMAIIVTLFGASVVYLLMA 507
           IIAD       K  S+ V + ++V +FG ++VYL+M+
Sbjct: 34  IIADGGCSRAAKCVSITVCLVLLVLIFGGAIVYLVMS 70


>Z47074-1|CAA87375.2|  851|Caenorhabditis elegans Hypothetical
           protein K07C10.1 protein.
          Length = 851

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 184 LSVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCL 309
           L++    MLIAG + GS + A        GW+G P   +MC+
Sbjct: 285 LTIFSKCMLIAGAI-GSPLAATGACFAILGWVGHPFNSIMCI 325


>U23523-8|AAC46563.1|   87|Caenorhabditis elegans Hypothetical
           protein F53A9.8 protein.
          Length = 87

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/51 (27%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
 Frame = -3

Query: 591 HGSDH-DQVPSANGQCWDQSE*ELFDDXSCHQQVHDRSSKEGYNDRHGHDH 442
           H  DH D     N Q  +        D   H+Q HD      ++   GH H
Sbjct: 37  HAGDHCDTQHGGNHQAGEHCAKTQHQDGEHHEQHHDAHDSHAHDSHEGHQH 87


>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
           protein K09H11.3 protein.
          Length = 1085

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -3

Query: 339 TESLATEGRHQAHQNDNGNTNPSSPDKGSRES 244
           T S A+  + ++HQN  GNTN +  + GS +S
Sbjct: 426 TGSTASGRQSRSHQNRRGNTNATPRNNGSGKS 457


>Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical
           protein T21B6.3 protein.
          Length = 821

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 261 CQDWMDWCSHYHSDVLGGGLQWQATR*LLDHSGGTQSS 374
           C +W +WC     D   GG Q   TR  L+ +G   SS
Sbjct: 704 CCNWSEWCHWSMCDKECGGGQSIRTRTCLNSAGSPDSS 741


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,141,385
Number of Sequences: 27780
Number of extensions: 252493
Number of successful extensions: 878
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)