Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_D18
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   6.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.9  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 447 RVHGDHCNPLW 479
           R+H D C+ LW
Sbjct: 132 RIHADSCDRLW 142


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
 Frame = -3

Query: 528 ELFDDXSCHQQVHDRSSKEGYNDRHGHDHA--XGLAESLISNNSVWVP 391
           EL D  +  +   D+  +  Y + HGHD      +AE L     +  P
Sbjct: 682 ELVDAPADQEGDDDQVDEREYPESHGHDSGQDEDMAEDLSMAPDIMTP 729


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 318 GRHQAHQNDNGNTNPSSPDKGSRE 247
           G  Q+H   + N++PSS   G ++
Sbjct: 805 GHQQSHHGLHINSSPSSVQSGQQQ 828


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,019
Number of Sequences: 438
Number of extensions: 2926
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)