Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_D17
(619 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 2e-28
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 85 4e-17
SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 66 2e-11
SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15) 62 3e-10
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 60 1e-09
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10) 55 4e-08
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 48 5e-06
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 47 1e-05
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 46 3e-05
SB_42049| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_1408| Best HMM Match : TPR_1 (HMM E-Value=2.6e-05) 42 3e-04
SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17) 42 5e-04
SB_26739| Best HMM Match : TPR_2 (HMM E-Value=1e-34) 38 0.007
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 36 0.020
SB_48397| Best HMM Match : TPR_2 (HMM E-Value=6.6e-26) 36 0.020
SB_52347| Best HMM Match : TPR_1 (HMM E-Value=0) 35 0.061
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 33 0.19
SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10) 33 0.19
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_39326| Best HMM Match : TPR_2 (HMM E-Value=3.5e-05) 31 0.57
SB_13361| Best HMM Match : TPR_2 (HMM E-Value=0.0021) 31 0.57
SB_23869| Best HMM Match : rve (HMM E-Value=2.2e-16) 31 0.99
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 30 1.3
SB_59121| Best HMM Match : TPR_1 (HMM E-Value=7.4e-10) 30 1.3
SB_53145| Best HMM Match : TPR_1 (HMM E-Value=3.4e-08) 30 1.7
SB_31847| Best HMM Match : Sugar_tr (HMM E-Value=4.6e-05) 30 1.7
SB_39928| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_11364| Best HMM Match : TPR_2 (HMM E-Value=3e-06) 29 4.0
SB_49732| Best HMM Match : TPR_1 (HMM E-Value=4.2) 29 4.0
SB_22125| Best HMM Match : TPR_1 (HMM E-Value=7.7e-13) 29 4.0
SB_22235| Best HMM Match : CP2 (HMM E-Value=1.1) 28 5.3
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 28 5.3
SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15) 28 5.3
SB_30246| Best HMM Match : IspA (HMM E-Value=0.39) 28 5.3
SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019) 28 7.0
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 28 7.0
SB_34245| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17) 27 9.2
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 122 bits (295), Expect = 2e-28
Identities = 63/154 (40%), Positives = 84/154 (54%), Gaps = 5/154 (3%)
Frame = +1
Query: 166 KVEQLKKKGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAE 345
K +LK +GN AL + +AI+ YTEAI LDP NHV YSNRS LEDA
Sbjct: 8 KAAKLKDQGNAALSAGDTQKAIEFYTEAILLDPANHVFYSNRSAAFAKLSKYNEALEDAR 67
Query: 346 KTVSLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQGLRDVXRAMKES 525
K V + P+W KGYSR G+ +L Y++A A+ TGLR +P N QL GL +V +
Sbjct: 68 KCVEIKPDWGKGYSRLGTAYSFLKMYQKAEEAFTTGLRHDPNNAQLKSGLEEVQSNAAQQ 127
Query: 526 NLQX-----ERLIXLYKNPRTREWMKDPEYVTKI 612
Q L +P+TR +++ P+YV I
Sbjct: 128 TFQNPFSSPNMYTLLQAHPKTRAYLQQPDYVAAI 161
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 166 KVEQLKKKGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAE 345
K + K+KGN+ +F A K YTEAI +P + LYSNR+ LE+A+
Sbjct: 364 KSAEEKEKGNEYFKKGDFPSAQKHYTEAIKRNPEDAKLYSNRAATFQKLAAFNLALEEAK 423
Query: 346 K 348
+
Sbjct: 424 E 424
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 7/155 (4%)
Frame = +1
Query: 166 KVEQLKKKGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAE 345
K + K+ GN A ++FD A K + A L+P N Y+N + +++
Sbjct: 229 KAMEEKELGNAAYKKKDFDTAHKHFNNAKELNPDNMTFYTNNAAAFFEEGNYEECIKECL 288
Query: 346 KTVSLNPN-------WSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQGLRDV 504
+ V + + K ++R G+ + Y++AI Y L E + + ++++
Sbjct: 289 EAVEVGRSNRAEFALIGKAFARIGNSYAKQNNYKDAIKYYNKAL-AEKRTPDVLKKVQEL 347
Query: 505 XRAMKESNLQXERLIXLYKNPRTREWMKDPEYVTK 609
+ MKE ERL + E K EY K
Sbjct: 348 EKLMKEE----ERLAYIDPVKSAEEKEKGNEYFKK 378
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 85.0 bits (201), Expect = 4e-17
Identities = 42/106 (39%), Positives = 56/106 (52%)
Frame = +1
Query: 184 KKGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLN 363
K DA +F +A++ Y+EAI LDP NHVLY NRS LED +K LN
Sbjct: 27 KWAGDACSKGDFQKAVELYSEAIKLDPNNHVLYGNRSAACIRTWQLEQALEDGKKAAELN 86
Query: 364 PNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQGLRD 501
P W K + R+G L + R+ EA+ A+ T L + + QL L D
Sbjct: 87 PLWPKAHYRQGVALQCMGRHAEALAAFATALAQDEKSPQLLNTLLD 132
>SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 868
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/97 (35%), Positives = 45/97 (46%)
Frame = +1
Query: 172 EQLKKKGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKT 351
E K +GND + + AI YT AI+ P NH+LY NR+ L D +
Sbjct: 501 EDRKLQGNDHFNHGKYKAAISAYTLAISGAPYNHILYGNRAQSYLKSEDLREGLTDGRRA 560
Query: 352 VSLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRL 462
V L P+W+KG R L YE AI R ++L
Sbjct: 561 VVLKPDWTKGQFRYAQAFFELGYYERAISTNRAAIKL 597
>SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15)
Length = 458
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/97 (31%), Positives = 51/97 (52%)
Frame = +1
Query: 175 QLKKKGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTV 354
Q+ +GN+ N+ AI+ +T+AI LD + + NRS L+DA+ +
Sbjct: 271 QIAVRGNEMANLGNYQAAIELFTQAIKLDARDFRFFGNRSYCFDRLGQFEKALQDADVAI 330
Query: 355 SLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLE 465
SL P+W KG+ R+G L L + +A A+ L+L+
Sbjct: 331 SLAPDWPKGFFRRGRALAGLKLFSDAEGAFAHVLKLD 367
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Frame = +1
Query: 181 KKKGNDALXNQNFDEAIKCYTEAIALDP----TNHVLYSNRSXXXXXXXXXXXXLEDAEK 348
K++GNDA ++ +A + YTEA+ +DP TN LY NR+ +ED +
Sbjct: 37 KQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKNDQAIEDCTQ 96
Query: 349 TVSLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQGLRDVXRAMKES 525
++L+ ++K Y ++ + +YEEA+ Y + + + ++++ + L +K+S
Sbjct: 97 AMNLDHTYTKAYLKRANCYMESEKYEEAVRDYESLCKKDRSSREFRRLLEKAKLELKKS 155
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Frame = +1
Query: 181 KKKGNDALXNQNFDEAIKCYTEAIALDP----TNHVLYSNRSXXXXXXXXXXXXLEDAEK 348
K++GNDA ++ +A + YTEA+ +DP TN LY NR+ +ED +
Sbjct: 37 KQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKNDQAIEDCTQ 96
Query: 349 TVSLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQGLRDVXRAMKES 525
++L+ ++K Y ++ + +YEEA+ Y + + + ++++ + L +K+S
Sbjct: 97 AMNLDHTYTKAYLKRANCYMESEKYEEAVRDYESLCKKDRSSREFRRLLEKAKLELKKS 155
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 58.0 bits (134), Expect = 6e-09
Identities = 30/85 (35%), Positives = 42/85 (49%)
Frame = +1
Query: 166 KVEQLKKKGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAE 345
K ++KGNDA+ + F EA+ YT+ I L T+H L+SNR+ L D E
Sbjct: 863 KANDFREKGNDAVKREEFQEALDWYTKGIELTKTDHRLFSNRALCHLKLNKPKEALADCE 922
Query: 346 KTVSLNPNWSKGYSRKGSVLXYLSR 420
+ L ++ K RK L LSR
Sbjct: 923 SCLKLEEHFGKALQRKAWALHELSR 947
>SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10)
Length = 452
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = +1
Query: 181 KKKGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSL 360
+ +GN + ++ + AI Y ++I P N+ + R+ L D E+ + L
Sbjct: 288 RSEGNKKMISKEYRTAIDLYNKSILASPINYFSWCQRATAFISLNKYEESLLDFEECIKL 347
Query: 361 NPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQGL 495
NP W KGY +G +L +Y++A+ + P ++ +AQ L
Sbjct: 348 NPKWVKGYLFRGLSQLHLRQYKDALVTLNYAGSMCPDDKDVAQKL 392
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 54.4 bits (125), Expect = 7e-08
Identities = 29/104 (27%), Positives = 48/104 (46%)
Frame = +1
Query: 166 KVEQLKKKGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAE 345
+ E LK K N N++ AI YT+AI L Y NRS L DA
Sbjct: 186 EAEDLKLKANGYFKEGNYNSAITFYTQAIELKADVPAYYGNRSFCYLKTEYYGLALADAN 245
Query: 346 KTVSLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQ 477
K + L+ + KGY R+ + L +++ ++ Y ++ P+++
Sbjct: 246 KAIQLDRKYIKGYYRRATANMALGKFKLSLKDYEMVVKFHPSDK 289
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 54.0 bits (124), Expect = 9e-08
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Frame = +1
Query: 154 TAMDKVEQLKKKGNDALXNQNFDEAIKCYTEAIALDPTNH-----VLYSNRSXXXXXXXX 318
T ++ + K KGN +++AIKCYTEAI L P + Y NR+
Sbjct: 136 TPSEQAQVAKLKGNKYFKGCKYEQAIKCYTEAIELCPPENKQDLSTFYQNRAAAYEQMNQ 195
Query: 319 XXXXLEDAEKTVSLNPNWSKGYSRKGSVLXYLSRYEEAI 435
+E+A K + LN ++K R+ L L R +E +
Sbjct: 196 FENVVEEATKALELNSKYTKALMRRARALEKLERKQECL 234
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 331 LEDAEKTVSLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTN 474
LE E+ + NP+ S VL ++EEA + T ++L+P N
Sbjct: 435 LELFEEISTNNPDNPDALSLHAQVLQEQGQFEEACEKFDTAIKLQPEN 482
>SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 784
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +1
Query: 178 LKKKGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXX---XXXXXLEDAEK 348
LK GN+A Q F A+ Y EA+ L P + VLY+NR+ L D K
Sbjct: 337 LKTIGNEAFCKQQFLTAVNMYNEALNLAPNSAVLYANRAAAFIKRSWEGDVYAALRDCHK 396
Query: 349 TVSLNPNWSKGYSRKGSVLXYLSRYEEAI 435
++L+PN +K + R+ L L +EA+
Sbjct: 397 ALTLDPNHTKAHFRQARCLYELRWCQEAL 425
>SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 927
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/107 (24%), Positives = 44/107 (41%)
Frame = +1
Query: 190 GNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPN 369
GN + FD A+ Y A+ L P + V++ N + ++ + + L PN
Sbjct: 235 GNVLKEARIFDRAVAAYLRALNLSPNHAVVHGNLACVYYEQGLIDLAVDTYRRAIELQPN 294
Query: 370 WSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQGLRDVXR 510
+ Y + L + EA Y T L+L PT+ L ++ R
Sbjct: 295 FPDAYCNLANALKEQGKVSEAEECYNTALQLSPTHADSLNNLANIKR 341
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +1
Query: 235 CYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGYSRKGSVLXYL 414
CY +AI P+ V +SN + EK V L+PN+ Y G+VL
Sbjct: 182 CYLKAIETQPSFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVLKEA 241
Query: 415 SRYEEAIXAYRTGLRLEPTN 474
++ A+ AY L L P +
Sbjct: 242 RIFDRAVAAYLRALNLSPNH 261
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = +1
Query: 223 EAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGYSRKGSV 402
EA+ Y EAI + PT +SN ++ + + +NP ++ +S SV
Sbjct: 382 EALLHYKEAIRIHPTFADAFSNMGNLLKEMQDIQGAIQCYSRAIQINPAFADAHSNLASV 441
Query: 403 LXYLSRYEEAIXAYRTGLRLEPT 471
EAI +YRT L+L+P+
Sbjct: 442 HKDSGNIPEAIQSYRTALKLKPS 464
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Frame = +1
Query: 196 DALXNQN-FDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNW 372
+AL Q EA +CY A+ L PT+ +N + + K + + P +
Sbjct: 304 NALKEQGKVSEAEECYNTALQLSPTHADSLNNLANIKREQGKIEESIRLYCKALEIFPEF 363
Query: 373 SKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQGLRDVXRAMKE 522
+ +S SVL + +EA+ Y+ +R+ PT + ++ + M++
Sbjct: 364 AAAHSNLASVLQQQGKLQEALLHYKEAIRIHPTFADAFSNMGNLLKEMQD 413
Score = 31.9 bits (69), Expect = 0.43
Identities = 22/86 (25%), Positives = 31/86 (36%)
Frame = +1
Query: 211 QNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGYSR 390
+ D + T AI +P YSN L + V L P++ GY
Sbjct: 95 RRLDRSAHFSTLAIKQNPMLAEAYSNLGNVFKERGQLKDALANYRHAVKLKPDFIDGYIN 154
Query: 391 KGSVLXYLSRYEEAIXAYRTGLRLEP 468
+ L E A+ AY T L+ P
Sbjct: 155 LAAALVAAGDLEGAVHAYATALQYNP 180
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 190 GNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPN 369
GN Q+ AI+CY+ AI ++P +SN + ++ + L P+
Sbjct: 405 GNLLKEMQDIQGAIQCYSRAIQINPAFADAHSNLASVHKDSGNIPEAIQSYRTALKLKPS 464
Query: 370 WSKGY 384
+ Y
Sbjct: 465 FPDAY 469
>SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 206
Score = 48.4 bits (110), Expect = 5e-06
Identities = 29/102 (28%), Positives = 44/102 (43%)
Frame = +1
Query: 172 EQLKKKGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKT 351
E K +GN +N+ AI Y++AI P Y NRS LEDA +
Sbjct: 35 EAKKAEGNREYGLKNYVSAIALYSKAIEFAPHVATFYGNRSAAYMMISNYDKALEDALLS 94
Query: 352 VSLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQ 477
+ ++ N+ KG+ R + A+ R L L+P N+
Sbjct: 95 IEIDNNFVKGHYRAAKCHLAMGSASNALREIRKVLELDPKNK 136
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 46.8 bits (106), Expect = 1e-05
Identities = 40/133 (30%), Positives = 56/133 (42%), Gaps = 23/133 (17%)
Frame = +1
Query: 145 LQKTAMDKVEQLKKK--GNDALXNQNF--DEAIKCYTEAIALDPTNHVLYSNRSXXXXXX 312
L+K ++E + + GN L N F DE ++ Y EA L+P +H+L SN S
Sbjct: 155 LKKNFASELESARLRICGNLLLNNDEFSKDEILEKYKEAEKLNPRDHLLQSNMSHVLLSL 214
Query: 313 XXXXXXLEDAEKTVSLNPNWSK-------------------GYSRKGSVLXYLSRYEEAI 435
L+ AE+ + PNW K GY RKG L R EA
Sbjct: 215 GKFQEALDKAEQACHIRPNWPKVPSHKCSQFKVMHFVLICQGYYRKGCAFLGLGRNVEAA 274
Query: 436 XAYRTGLRLEPTN 474
++ L L+P N
Sbjct: 275 VSFVQCLALDPHN 287
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +1
Query: 175 QLKKKGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRS 294
QLK+KGN A Q ++EA+K YT+A+ D TN Y+NR+
Sbjct: 122 QLKEKGNLAFKQQKYEEAVKLYTQALNQDRTNTAFYTNRA 161
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/113 (23%), Positives = 49/113 (43%)
Frame = +1
Query: 187 KGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNP 366
+G+ + + +A+ Y+ A+ L PT+ RS DAE + +
Sbjct: 22 EGDVLFKQEEYQKALDSYSLALELKPTDPFCLVARSKCYLKLGKNDAAYRDAEAALEEDK 81
Query: 367 NWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQGLRDVXRAMKES 525
+++KG +K L + +E A+ Y G +L P Q+ G++ A+ S
Sbjct: 82 DFNKGLYQKAEALYAMGDFEYALVYYHRGNKLRPELQEFRLGIQKAQEAIDNS 134
>SB_42049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +1
Query: 145 LQKTAMD--KVEQLKKKGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNR 291
+ TA D K E+LK +GN + + F EAI Y+ AI LD TN V NR
Sbjct: 81 MHPTAQDRQKAEELKNEGNQLMKEEKFQEAINSYSRAIELDNTNSVYPCNR 131
>SB_1408| Best HMM Match : TPR_1 (HMM E-Value=2.6e-05)
Length = 190
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/60 (28%), Positives = 37/60 (61%)
Frame = +1
Query: 337 DAEKTVSLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQGLRDVXRAM 516
D + +SL+ +++K Y R+G +L++ E++ ++ LRLEP N+Q Q + ++ + +
Sbjct: 107 DCDLALSLDYSYTKAYLRRGKARSHLNKLHESLSDFKEALRLEPGNKQAQQEILNLKQKL 166
>SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17)
Length = 455
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 10/113 (8%)
Frame = +1
Query: 175 QLKKKGNDALXNQNFDEAIKCYTEAIALDPTNH----------VLYSNRSXXXXXXXXXX 324
++K++GN +++ A+ Y A+ L N V+Y NR+
Sbjct: 11 EIKEEGNKYFKAGDYEAALSSYAAALKLYSGNEKDKEKQKEKAVIYKNRAACQLKLEKYE 70
Query: 325 XXLEDAEKTVSLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQL 483
++DA K + + PN K R+ R EEA RT LEP ++++
Sbjct: 71 AAIKDATKALDIVPNDPKALFRRSQAFEATGRLEEAFKDARTLSHLEPKSERV 123
>SB_26739| Best HMM Match : TPR_2 (HMM E-Value=1e-34)
Length = 935
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 277 LYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGYSRKGSVLXYLSRYEEAIXAY 444
L NRS L DA++ V P+WSKG+ R GS L + EA+ A+
Sbjct: 439 LLCNRSLAFLKKNFLKSALTDAKECVKTRPSWSKGHYRLGSCLAQSDQGVEAMIAF 494
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/67 (32%), Positives = 27/67 (40%)
Frame = +1
Query: 277 LYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGL 456
L SNR L DA+K V+ P W K Y R L L + EA+ A G
Sbjct: 705 LLSNRCLIYLNTYQYDEALADAKKCVASRPGWFKAYYRLSCCLKALGKTTEALKAACDGY 764
Query: 457 RLEPTNQ 477
R N+
Sbjct: 765 RKADCNE 771
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/95 (22%), Positives = 38/95 (40%)
Frame = +1
Query: 190 GNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPN 369
G++ + + D A+ CY AI DP ++ + K +S+NP+
Sbjct: 1408 GHEYVLTEELDRAMSCYRMAIRSDPRHYNAWYGVGMIYYKQEKFNLAEVHFRKALSINPS 1467
Query: 370 WSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTN 474
S Y G V + + E A+ + ++P N
Sbjct: 1468 SSVLYCHVGVVQHAMRKSEAALATINKAMLIDPKN 1502
>SB_48397| Best HMM Match : TPR_2 (HMM E-Value=6.6e-26)
Length = 598
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +1
Query: 229 IKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGYSRKGSVLX 408
I Y+EA+ ++P + + RS +DA++ ++ P+ KGY + + L
Sbjct: 2 IAYYSEALEIEPDDEDVLGCRSAVYTKLGMFNEARKDADRLIANVPDKPKGYFLQAAALQ 61
Query: 409 YLSRYEEAIXAYRTGLRLEPTNQQL 483
L + A+ AY L+ TN L
Sbjct: 62 NLGNHSSALLAYLKTYELD-TNHPL 85
>SB_52347| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 687
Score = 34.7 bits (76), Expect = 0.061
Identities = 20/83 (24%), Positives = 37/83 (44%)
Frame = +1
Query: 211 QNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGYSR 390
Q +EA+ Y EA+ L+PT +N + E+ V + ++ G+
Sbjct: 443 QRDEEALAYYREAVRLNPTYSDALNNLGNLLKEKGEISEAEKLLERAVDSSKAFAAGWMN 502
Query: 391 KGSVLXYLSRYEEAIXAYRTGLR 459
G+V L++ +EA Y+ +R
Sbjct: 503 LGTVKAALNKMQEAETCYKNAIR 525
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 394 GSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQGLRDVXRAMKESNLQXERLI 549
G V R EEA+ YR +RL PT L ++ + E + + E+L+
Sbjct: 436 GKVRSTQQRDEEALAYYREAVRLNPTYSDALNNLGNLLKEKGEIS-EAEKLL 486
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 181 KKKGNDALXNQNFDEAIKCYTEAIALDPTNHVLYSNRS 294
K KGNDA + ++ E++ YT +I L PT Y+NR+
Sbjct: 219 KDKGNDAFRSGDYKESLVYYTRSIELKPT-AASYNNRA 255
>SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10)
Length = 466
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 376 KGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQL 483
K Y R+G+ + Y EA+ Y + L+++P N+ L
Sbjct: 415 KAYVRRGTAAYHSEEYVEALKDYESALKIDPNNESL 450
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 31.9 bits (69), Expect = 0.43
Identities = 21/101 (20%), Positives = 44/101 (43%)
Frame = +1
Query: 244 EAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGYSRKGSVLXYLSRY 423
E A+DP + N + ++ K + ++ K R+G L L Y
Sbjct: 1009 EEKAVDPIKCAGHLNIAACHLKLGNNFKCIKACNKALDIDKENIKALFRRGKALLNLKDY 1068
Query: 424 EEAIXAYRTGLRLEPTNQQLAQGLRDVXRAMKESNLQXERL 546
E++ + L L+P N++ + L+ V +K+ + + ++L
Sbjct: 1069 EKSKEDFTQVLELDPKNREAREQLKIVNGMLKDHHQKEKKL 1109
>SB_39326| Best HMM Match : TPR_2 (HMM E-Value=3.5e-05)
Length = 187
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +1
Query: 346 KTVSLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQGLRDVXRAMKES 525
+ + ++P+ K RKG VL EA+ + +L+P N+ + LR + K
Sbjct: 2 QVLQIDPDNVKALFRKGKVLASKGELSEALPLIKKANQLDPNNKTIRAELRSL---RKRK 58
Query: 526 NLQXERLIXLYK 561
++Q E+ +Y+
Sbjct: 59 SIQDEKERSMYQ 70
>SB_13361| Best HMM Match : TPR_2 (HMM E-Value=0.0021)
Length = 304
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +1
Query: 181 KKKGNDALXNQNFDEAIKCYTEAIAL----DPTNHVLYSNRS 294
K++GN +NF +AI YTE I L N +LY+NR+
Sbjct: 88 KEEGNYEYKRKNFKKAIDAYTEGIKLRCQDGHVNAILYTNRA 129
>SB_23869| Best HMM Match : rve (HMM E-Value=2.2e-16)
Length = 1456
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +1
Query: 370 WSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQGLRDVXRAMKESNLQXERLI 549
W Y+ + Y+++YEE G+RLEP Q + GL+ + + + S
Sbjct: 614 WPPEYTTEAQRADYVAQYEE-----HQGIRLEPAKIQSSPGLQAMAKLLLNSMWGK---F 665
Query: 550 XLYKNPRTREWMKDPE 597
N R E+++DPE
Sbjct: 666 GERTNRRQTEFLEDPE 681
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 277 LYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGYSRKGSVLXYLSRYEEA 432
L+S S + DA++ + +NP+ K Y K S L + +EEA
Sbjct: 402 LHSTPSEDTGIGSVIQAVIHDADQGIRVNPSLPKSYLAKASALILQNNWEEA 453
>SB_59121| Best HMM Match : TPR_1 (HMM E-Value=7.4e-10)
Length = 154
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 382 YSRKGSVLXYLSRYEEAIXAYRTGLRL-EPTN 474
Y +G VL L R+EEAI Y L+L EPT+
Sbjct: 3 YIERGKVLEKLKRFEEAIENYTLTLKLDEPTS 34
>SB_53145| Best HMM Match : TPR_1 (HMM E-Value=3.4e-08)
Length = 200
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +1
Query: 340 AEKTVSLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTN 474
A+K +++ + + K S+L L +Y+EA+ +R ++L P+N
Sbjct: 150 AQKAHTIDSHNVQALILKASLLQALDKYQEALLHFREAVKLSPSN 194
>SB_31847| Best HMM Match : Sugar_tr (HMM E-Value=4.6e-05)
Length = 549
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
Frame = +1
Query: 487 QGLRDVXRAMKESNLQXER------LIXLYKNPRTREW 582
Q LR + +++ES ++ ER LI LY+ P+ R+W
Sbjct: 227 QALRGLIESIRESQIETERKAKRYTLIDLYRTPKMRKW 264
>SB_39928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
Frame = +1
Query: 487 QGLRDVXRAMKESNLQXER------LIXLYKNPRTREW 582
Q LR + +++ES ++ ER LI LY+ P+ R+W
Sbjct: 35 QALRGLIESIRESQIETERKAKRYTLIDLYRTPKMRKW 72
>SB_11364| Best HMM Match : TPR_2 (HMM E-Value=3e-06)
Length = 357
Score = 28.7 bits (61), Expect = 4.0
Identities = 33/154 (21%), Positives = 60/154 (38%), Gaps = 16/154 (10%)
Frame = +1
Query: 136 N*LLQKTAMDK----VEQLKKKGNDALXNQNFDEAIKCYTEAIALDPTN-----HVLYSN 288
N ++++TA K L+ +GN + A++ YT++I + P+ + Y+N
Sbjct: 52 NIIIKQTASTKSSSTAASLRNEGNTYFQKRQLGRALEVYTQSILVAPSTDLKVLSLAYAN 111
Query: 289 RSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGY---SRKGSVLXYLSRYEEAIXAYRTGLR 459
RS L D E + Y RK L L R EE+ + +
Sbjct: 112 RSAVLFHMKEYELCLRDIEFAQKMKYPGEMVYKILDRKARSLKALCRIEESKKVFEEAIV 171
Query: 460 LEPTN----QQLAQGLRDVXRAMKESNLQXERLI 549
T+ + ++ V + + E + Q E L+
Sbjct: 172 SSKTSKLKRKDRESWVKQVEKQISECSNQTENLM 205
>SB_49732| Best HMM Match : TPR_1 (HMM E-Value=4.2)
Length = 32
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 286 NRSXXXXXXXXXXXXLEDAEKTVSLNPNWSK 378
NRS LEDA K V + P+W K
Sbjct: 2 NRSAAFAKLSKYNEALEDARKCVEIKPDWGK 32
>SB_22125| Best HMM Match : TPR_1 (HMM E-Value=7.7e-13)
Length = 452
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 331 LEDAEKTVSLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPT 471
+ D +S +P +G+ R+ VL + R EAI L L+P+
Sbjct: 109 ISDFSTVISHSPKNPEGWIRRAEVLSPIGRIPEAIKDISVALSLQPS 155
>SB_22235| Best HMM Match : CP2 (HMM E-Value=1.1)
Length = 284
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 509 RXTSLRP*ASCWLVGSSLKPVL*AXMASSY-LDKYXKTL 396
R +P +CW+ G+ +KPV + S+ L K+ TL
Sbjct: 240 RDLGTKPHLNCWMKGTEIKPVTRRVIKESFILGKHTNTL 278
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 361 NPN--WSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQ 489
NP+ + G ++K S Y+SRYE I Y T R++ TNQ+ Q
Sbjct: 342 NPHLVYHTGTTKKSSN-DYVSRYELDIYPYVTLFRVQGTNQEYIQ 385
>SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15)
Length = 884
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 352 VSLNPNWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQL 483
+SL PN + + +L +R+ EAI Y+ + L P++ L
Sbjct: 738 LSLKPNSADANTNMAHLLRVTNRHMEAIEQYKKAISLRPSDPML 781
>SB_30246| Best HMM Match : IspA (HMM E-Value=0.39)
Length = 1502
Score = 28.3 bits (60), Expect = 5.3
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +1
Query: 367 NWSKGYSRKGSVLXYLSRYEEAIXAYRTGLRLEPTNQQLAQGLRDVXRAMKESNLQ---- 534
+W+ +S +LS +E + AY+T T+ ++ QG D KE Q
Sbjct: 260 HWNTAFSVAEDTQLFLSEKKERVYAYKTVELNGTTDDRIQQGATDNRTKYKEHYDQVWSE 319
Query: 535 XERLIXLYK----NPRTREWMKDPEYVTK 609
+R+I K +PR R ++ E + K
Sbjct: 320 TQRIIEALKPHMNDPRIRHQFEELEMLAK 348
>SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019)
Length = 94
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +1
Query: 280 YSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGYSRKGSVLXYLSRYEEAI 435
Y N + +ED + + L+ N +K R+G ++ YEEA+
Sbjct: 43 YLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEEAM 94
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +1
Query: 280 YSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGYSRKGSVLXYLSRYEEAI 435
Y N + +ED + + L+ N +K R+G ++ YEEA+
Sbjct: 370 YLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEEAM 421
>SB_34245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 211 QNFDEAIKCYTEAIALDPTNHVLYSN 288
+NF A + Y EA+ LDP N VL N
Sbjct: 115 KNFISARRHYEEALKLDPDNTVLRQN 140
>SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17)
Length = 786
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 373 SKGYSRKGSVLXYLSRYEEAIXAYRTGLRLE 465
++ Y G VL RY EA+ A+R LR++
Sbjct: 698 ARSYHDLGVVLVARCRYNEALAAFREALRIQ 728
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,610,172
Number of Sequences: 59808
Number of extensions: 293724
Number of successful extensions: 776
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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