Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_D11
         (656 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005152-1|AAH05152.1|  193|Homo sapiens chromosome 16 open read...   329   4e-90
AF093680-1|AAD40382.1|  193|Homo sapiens transcription factor II...   329   4e-90
AF087845-1|AAP97158.1|  193|Homo sapiens EVORF protein.               329   4e-90
BC121186-1|AAI21187.1|  729|Homo sapiens WDR90 protein protein.        37   0.055
BC121185-1|AAI21186.1|  730|Homo sapiens WDR90 protein protein.        37   0.055
AL022341-2|CAC79469.1|  754|Homo sapiens protein ( Human DNA seq...    37   0.055
AK091062-1|BAC03575.1|  492|Homo sapiens  cotransporter.  protein.     37   0.055
AE006464-7|AAK61239.1|  705|Homo sapiens Hypothetical protein pr...    37   0.055
AB067511-1|BAB67817.1|  613|Homo sapiens KIAA1924 protein protein.     37   0.055

>BC005152-1|AAH05152.1|  193|Homo sapiens chromosome 16 open reading
           frame 80 protein.
          Length = 193

 Score =  329 bits (809), Expect = 4e-90
 Identities = 154/159 (96%), Positives = 156/159 (98%)
 Frame = +3

Query: 129 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYIT 308
           MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEI GTNVSTTYIT
Sbjct: 1   MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYIT 60

Query: 309 CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRXFRASNYQSTTRVKPFICT 488
           CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRR FRASNYQSTTRVKPFICT
Sbjct: 61  CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT 120

Query: 489 MPMRLDEGWNQIQFNLADFTRRAYGTNYVETLRVQIHAN 605
           MPMRLD+GWNQIQFNL DFTRRAYGTNY+ETLRVQIHAN
Sbjct: 121 MPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHAN 159


>AF093680-1|AAD40382.1|  193|Homo sapiens transcription factor IIB
           protein.
          Length = 193

 Score =  329 bits (809), Expect = 4e-90
 Identities = 154/159 (96%), Positives = 156/159 (98%)
 Frame = +3

Query: 129 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYIT 308
           MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEI GTNVSTTYIT
Sbjct: 1   MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYIT 60

Query: 309 CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRXFRASNYQSTTRVKPFICT 488
           CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRR FRASNYQSTTRVKPFICT
Sbjct: 61  CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT 120

Query: 489 MPMRLDEGWNQIQFNLADFTRRAYGTNYVETLRVQIHAN 605
           MPMRLD+GWNQIQFNL DFTRRAYGTNY+ETLRVQIHAN
Sbjct: 121 MPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHAN 159


>AF087845-1|AAP97158.1|  193|Homo sapiens EVORF protein.
          Length = 193

 Score =  329 bits (809), Expect = 4e-90
 Identities = 154/159 (96%), Positives = 156/159 (98%)
 Frame = +3

Query: 129 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYIT 308
           MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEI GTNVSTTYIT
Sbjct: 1   MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYIT 60

Query: 309 CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRXFRASNYQSTTRVKPFICT 488
           CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRR FRASNYQSTTRVKPFICT
Sbjct: 61  CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT 120

Query: 489 MPMRLDEGWNQIQFNLADFTRRAYGTNYVETLRVQIHAN 605
           MPMRLD+GWNQIQFNL DFTRRAYGTNY+ETLRVQIHAN
Sbjct: 121 MPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHAN 159


>BC121186-1|AAI21187.1|  729|Homo sapiens WDR90 protein protein.
          Length = 729

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 201 WDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNL- 377
           W +  + G +  +TD  ++  V  I G+  +  YI  P    ++LG+   +L ++ + L 
Sbjct: 21  WKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 80

Query: 378 KKYFTFEVQVLDDKN 422
            K+F   + V    N
Sbjct: 81  SKHFVIHLDVSSKDN 95


>BC121185-1|AAI21186.1|  730|Homo sapiens WDR90 protein protein.
          Length = 730

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 201 WDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNL- 377
           W +  + G +  +TD  ++  V  I G+  +  YI  P    ++LG+   +L ++ + L 
Sbjct: 21  WKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 80

Query: 378 KKYFTFEVQVLDDKN 422
            K+F   + V    N
Sbjct: 81  SKHFVIHLDVSSKDN 95


>AL022341-2|CAC79469.1|  754|Homo sapiens protein ( Human DNA
           sequence from clone LA16c-349E10 on chromosome 16
           Contains(part of) three novel genes, ESTs, STSs, GSSs
           and four CpG islands. leukoencnovel protein).
          Length = 754

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 201 WDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNL- 377
           W +  + G +  +TD  ++  V  I G+  +  YI  P    ++LG+   +L ++ + L 
Sbjct: 21  WKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 80

Query: 378 KKYFTFEVQVLDDKN 422
            K+F   + V    N
Sbjct: 81  SKHFVIHLDVSSKDN 95


>AK091062-1|BAC03575.1|  492|Homo sapiens  cotransporter.  protein.
          Length = 492

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 201 WDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNL- 377
           W +  + G +  +TD  ++  V  I G+  +  YI  P    ++LG+   +L ++ + L 
Sbjct: 21  WKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 80

Query: 378 KKYFTFEVQVLDDKN 422
            K+F   + V    N
Sbjct: 81  SKHFVIHLDVSSKDN 95


>AE006464-7|AAK61239.1|  705|Homo sapiens Hypothetical protein
           protein.
          Length = 705

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 201 WDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNL- 377
           W +  + G +  +TD  ++  V  I G+  +  YI  P    ++LG+   +L ++ + L 
Sbjct: 63  WKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 122

Query: 378 KKYFTFEVQVLDDKN 422
            K+F   + V    N
Sbjct: 123 SKHFVIHLDVSSKDN 137


>AB067511-1|BAB67817.1|  613|Homo sapiens KIAA1924 protein protein.
          Length = 613

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 201 WDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNL- 377
           W +  + G +  +TD  ++  V  I G+  +  YI  P    ++LG+   +L ++ + L 
Sbjct: 141 WKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 200

Query: 378 KKYFTFEVQVLDDKN 422
            K+F   + V    N
Sbjct: 201 SKHFVIHLDVSSKDN 215


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,998,572
Number of Sequences: 237096
Number of extensions: 1799765
Number of successful extensions: 3469
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3463
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)