Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_D11
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-4|CAD66219.1| 203|Caenorhabditis elegans Hypothetical pr... 287 4e-78
Z81542-4|CAB04418.1| 233|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z75538-1|CAA99839.2| 1615|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 28 6.7
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 28 6.7
AF025450-1|AAB70937.1| 321|Caenorhabditis elegans Hypothetical ... 28 6.7
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z77131-4|CAD66219.1| 203|Caenorhabditis elegans Hypothetical
protein C54C6.6 protein.
Length = 203
Score = 287 bits (705), Expect = 4e-78
Identities = 123/159 (77%), Positives = 145/159 (91%)
Frame = +3
Query: 129 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYIT 308
MF NTFQSG LS+LYSIGSKPLQIWD +++NGH+KRITD +IQSLVLEI+G N+ST +I+
Sbjct: 1 MFHNTFQSGLLSVLYSIGSKPLQIWDTQIKNGHVKRITDEEIQSLVLEIMGNNISTAFIS 60
Query: 309 CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRXFRASNYQSTTRVKPFICT 488
CP DP KTLGIKLPF VM++KN+ KYF+FEVQ++DDK ++R FRASNYQS TRVKPFICT
Sbjct: 61 CPVDPDKTLGIKLPFFVMVVKNMNKYFSFEVQIIDDKKIKRRFRASNYQSATRVKPFICT 120
Query: 489 MPMRLDEGWNQIQFNLADFTRRAYGTNYVETLRVQIHAN 605
MPMR+DEGWNQIQFNL+DF +RAYGTNYVETLR+QIHAN
Sbjct: 121 MPMRMDEGWNQIQFNLSDFVKRAYGTNYVETLRIQIHAN 159
>Z81542-4|CAB04418.1| 233|Caenorhabditis elegans Hypothetical
protein F49A5.6 protein.
Length = 233
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 545 EVSQVELYLVPAFVQPHGHSTDERLNPC 462
+VS V+ Y +P F+QPHG S R C
Sbjct: 117 DVSMVDGYNIPVFIQPHGVSGCHRAGGC 144
>Z75538-1|CAA99839.2| 1615|Caenorhabditis elegans Hypothetical protein
F20G4.1 protein.
Length = 1615
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -1
Query: 356 QKR*LYSKGLLWIRRACYVRGTDVRSHDFEHQALYIVICYPLYVPIAN 213
QK Y K LW G DV + H++ + +C+ L+ P N
Sbjct: 1213 QKITFYGKRNLWETNYGKREGFDVMKRLYAHESSTVALCFSLFEPAEN 1260
>Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical
protein C18D11.2 protein.
Length = 266
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = -1
Query: 566 SAVSSSCEVSQVELYLVPAFVQPHGHSTDERLNPCCRLVVAGSKXSTYVFVIKHLNFKSE 387
S++ SSC + EL ++ + G + +ER N L+ K + YV V + ++K+
Sbjct: 185 SSLKSSCHRLEKELKVITESIDKLGKAVEERHN---LLIGLMKKATVYVLVPRVTSWKT- 240
Query: 386 ILF*IFY 366
I+F +F+
Sbjct: 241 IIFFVFW 247
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical protein
Y37A1B.17b protein.
Length = 1467
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 445 ATTSLQQGLSRSSVLCP*GWTKAGTRYSSTWLTSHEELTALTMLRP*ESKYMPT 606
A ++Q R+ + P G +K GT SST +T TA T + P ++ +PT
Sbjct: 911 ANKAIQNMKQRARSVSPKG-SKPGTSSSSTTVTESPWATAPTFIPPAATEILPT 963
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein
Y37A1B.17a protein.
Length = 1538
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 445 ATTSLQQGLSRSSVLCP*GWTKAGTRYSSTWLTSHEELTALTMLRP*ESKYMPT 606
A ++Q R+ + P G +K GT SST +T TA T + P ++ +PT
Sbjct: 911 ANKAIQNMKQRARSVSPKG-SKPGTSSSSTTVTESPWATAPTFIPPAATEILPT 963
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 445 ATTSLQQGLSRSSVLCP*GWTKAGTRYSSTWLTSHEELTALTMLRP*ESKYMPT 606
A ++Q R+ + P G +K GT SST +T TA T + P ++ +PT
Sbjct: 911 ANKAIQNMKQRARSVSPKG-SKPGTSSSSTTVTESPWATAPTFIPPAATEILPT 963
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 445 ATTSLQQGLSRSSVLCP*GWTKAGTRYSSTWLTSHEELTALTMLRP*ESKYMPT 606
A ++Q R+ + P G +K GT SST +T TA T + P ++ +PT
Sbjct: 911 ANKAIQNMKQRARSVSPKG-SKPGTSSSSTTVTESPWATAPTFIPPAATEILPT 963
>AF025450-1|AAB70937.1| 321|Caenorhabditis elegans Hypothetical
protein C41H7.6 protein.
Length = 321
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 239 NR*RYTKPGARNRGNERQYHVHNMPGGSKE 328
+R R +P A N+GN+ +YHV +P +E
Sbjct: 182 DRTREAQP-AENQGNQEEYHVEEVPYAQEE 210
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 309 CPADPKKTL--GIKLPFLVMIIKNLKKYFTFEVQVLDDKN 422
CP D +K L I L V I L K E+QV+D+KN
Sbjct: 201 CPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKN 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,118,942
Number of Sequences: 27780
Number of extensions: 290392
Number of successful extensions: 755
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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