Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_D09
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    24   1.3  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   2.2  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   2.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.8  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   6.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.9  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 526 HSXQWPTNNDTCQ 488
           HS  WP N D CQ
Sbjct: 139 HSCDWPENVDGCQ 151


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 566 MVAVSSAFLFLAVAIFXGNCYRRDWLLY 649
           ++A +SAF+ L+ +     CY   W +Y
Sbjct: 7   ILAFASAFMVLSASAGNVVCYFASWTIY 34


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 566 MVAVSSAFLFLAVAIFXGNCYRRDWLLY 649
           ++A +SAF+ L+ +     CY   W +Y
Sbjct: 7   ILAFASAFMVLSASAGNVVCYFASWTIY 34


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 181 YAHWSQYHLCGGFISPPFICWSL 249
           Y+ WS        +SP   CWSL
Sbjct: 304 YSTWSTVQTPTTVMSPTINCWSL 326


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 181 YAHWSQYHLCGGFISPPFICWSLLDGII 264
           Y +WSQY +  G  +P  I   L   II
Sbjct: 93  YTNWSQYRVKIGKFTPEHIIPDLCTHII 120


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 303 GSIALIISGSLVTGLTKNLMGVTISTAKNIMQSSIG 410
           G +  + SGS + GLT N+    +S++     SSIG
Sbjct: 59  GLVTTLASGSSLNGLTNNVPSNGLSSSGPF--SSIG 92


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 209 VGALFLL-LSFAGPYWMESYPEMFSPFKHMGLWEYC 313
           +  L++L L +A  YW + Y + +  +    +  YC
Sbjct: 107 INVLYVLTLCYAVYYWRQQYEDFWHRYTLSFIENYC 142


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 243 PANERRRNKAPT*VILAPMSVAFDALGYSL 154
           PA++R R  A   ++    S   DA GY L
Sbjct: 171 PADDRGRVAAAAAMVAETASFHHDAAGYGL 200


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 181 YAHWSQYHLCGGFISPPFIC 240
           Y H  +YHL     S PF C
Sbjct: 242 YKHHLEYHLRNHAGSKPFQC 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,257
Number of Sequences: 336
Number of extensions: 4008
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)