Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_D09
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74031-10|CAA98450.1| 399|Caenorhabditis elegans Hypothetical p... 32 0.31
Z68008-2|CAD44147.1| 142|Caenorhabditis elegans Hypothetical pr... 29 2.2
U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linke... 29 2.9
U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linke... 29 2.9
U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linke... 29 2.9
AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-lin... 29 2.9
AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-lin... 29 2.9
AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-lin... 29 2.9
AC006790-13|AAF60737.2| 351|Caenorhabditis elegans Serpentine r... 29 2.9
Z82278-8|CAB05251.2| 312|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81492-4|CAB04031.1| 624|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 28 6.7
Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z93382-12|CAB07620.2| 1238|Caenorhabditis elegans Hypothetical p... 27 8.8
L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with... 27 8.8
L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with... 27 8.8
D83665-1|BAA20550.1| 1238|Caenorhabditis elegans copper transpor... 27 8.8
AL117206-6|CAB60450.1| 734|Caenorhabditis elegans Hypothetical ... 27 8.8
AL032665-3|CAA21773.2| 1238|Caenorhabditis elegans Hypothetical ... 27 8.8
AF039046-11|AAD34651.3| 388|Caenorhabditis elegans Hypothetical... 27 8.8
AF006635-1|AAB62695.1| 1116|Caenorhabditis elegans P-type ATPase... 27 8.8
>Z74031-10|CAA98450.1| 399|Caenorhabditis elegans Hypothetical
protein F32D8.10 protein.
Length = 399
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +3
Query: 240 LVLTGWNHIQKCSLHSNIWDCGSIALIISGSLVTGLTKNLMGVTISTAKNIMQSSIGCCL 419
+++T W +I K S+ S W + + SL+T + + + + +++ +G CL
Sbjct: 294 VIITIWEYIDKESIFSEDWIAFYVLSVDVISLLTIVASSARLPIYAYFQPLLRKEMGQCL 353
Query: 420 DG*WLCSFS 446
W C FS
Sbjct: 354 GDWWCCCFS 362
>Z68008-2|CAD44147.1| 142|Caenorhabditis elegans Hypothetical
protein R08B4.4 protein.
Length = 142
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 377 YSQEYYAIKHWLLPGWLMAVQFFVTVALMLSFAAQVLLACVIVRWPLXTVLRYEWIFVFY 556
Y + A K PGWL+A F + L+FA +L + + + +LR + + Y
Sbjct: 11 YFEANDACKLQFAPGWLVATSIF----MYLNFACVLLTFFICIIGLIIFMLRGDSKYQKY 66
Query: 557 SFIMVAVSSAF--LFLAVA 607
F+++ SS +F AVA
Sbjct: 67 MFVLICGSSLLTAIFGAVA 85
>U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform b protein.
Length = 713
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 506 RWPLXTVLRYEWIFVFYSFIMVAVSSAFLFLA 601
RWPL V W+F+ Y+ +V++ + L A
Sbjct: 91 RWPLGWVACQTWLFLDYTLCLVSILTVLLITA 122
>U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform a protein.
Length = 682
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 506 RWPLXTVLRYEWIFVFYSFIMVAVSSAFLFLA 601
RWPL V W+F+ Y+ +V++ + L A
Sbjct: 91 RWPLGWVACQTWLFLDYTLCLVSILTVLLITA 122
>U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform c protein.
Length = 622
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 506 RWPLXTVLRYEWIFVFYSFIMVAVSSAFLFLA 601
RWPL V W+F+ Y+ +V++ + L A
Sbjct: 91 RWPLGWVACQTWLFLDYTLCLVSILTVLLITA 122
>AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1c protein.
Length = 622
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 506 RWPLXTVLRYEWIFVFYSFIMVAVSSAFLFLA 601
RWPL V W+F+ Y+ +V++ + L A
Sbjct: 91 RWPLGWVACQTWLFLDYTLCLVSILTVLLITA 122
>AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1a protein.
Length = 713
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 506 RWPLXTVLRYEWIFVFYSFIMVAVSSAFLFLA 601
RWPL V W+F+ Y+ +V++ + L A
Sbjct: 91 RWPLGWVACQTWLFLDYTLCLVSILTVLLITA 122
>AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1b protein.
Length = 682
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 506 RWPLXTVLRYEWIFVFYSFIMVAVSSAFLFLA 601
RWPL V W+F+ Y+ +V++ + L A
Sbjct: 91 RWPLGWVACQTWLFLDYTLCLVSILTVLLITA 122
>AC006790-13|AAF60737.2| 351|Caenorhabditis elegans Serpentine
receptor, class z protein5 protein.
Length = 351
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +2
Query: 281 PFKHMGLWEYCFDNFRFPGYRFDKKFDGCHYIYSQEYYAIKHWLLPGWLMAVQFFVTVAL 460
PF G W++ +++ PGY F FD +Y YY ++ + V F+++
Sbjct: 177 PFLGNGSWDFGNESYLEPGYNFPFSFDS---LYMTIYYYLEVIATLSAFLYVPIFISLRK 233
Query: 461 MLSFAAQV 484
+ A+ V
Sbjct: 234 KSNIASVV 241
>Z82278-8|CAB05251.2| 312|Caenorhabditis elegans Hypothetical
protein M162.8 protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 248 YWMESYPEMFSPFKHMGLWEYCFDNFRFP 334
YW+ + E + ++ GL YC +NF+ P
Sbjct: 73 YWIHLHSECWCSTRNTGLGGYCTNNFKNP 101
>Z81492-4|CAB04031.1| 624|Caenorhabditis elegans Hypothetical
protein E03H4.7 protein.
Length = 624
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = +2
Query: 443 FVTVALMLSFAAQVLLACVIVRWPLXTVLRYEWIFVFYSFIMVAVSSAFLFLAV 604
F+ ++S+ + A ++ WP+ + + W+ I V +SS L + V
Sbjct: 286 FLVSNKLISYIGDISYALYLLHWPIYSYWKLNWVQYDQLLIFVLLSSIILAVIV 339
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = -2
Query: 622 VPTEYC-HSKKEESTRNC 572
+P EYC H KE STRNC
Sbjct: 1401 LPDEYCNHLDKEVSTRNC 1418
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = -2
Query: 622 VPTEYC-HSKKEESTRNC 572
+P EYC H KE STRNC
Sbjct: 1401 LPDEYCNHLDKEVSTRNC 1418
>Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical
protein DH11.3 protein.
Length = 1270
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 201 SPMWGLYFSSFHLLVL---TGWNHIQKCSLHSN--IWDCGSIALIISGSLVTGLTKNLMG 365
S W +F L V+ TG + C L+ N I G + LI++ VTG L+G
Sbjct: 299 STFWAGFFDGLALFVIYFITGISLFFGCRLYFNQEIGKAGDVILIVNTICVTGYFLGLLG 358
Query: 366 VTISTAKNIMQS 401
+S+ + S
Sbjct: 359 PHMSSLQQAATS 370
>Z93382-12|CAB07620.2| 1238|Caenorhabditis elegans Hypothetical
protein Y76A2A.2 protein.
Length = 1238
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 362 GCHYIYSQEYYAIKHWLLPGWLMAVQFFVTVALMLSFAAQVLLACVIVRWP 514
G Y Y + AIKH M V ++ + +++ VLL +I +WP
Sbjct: 475 GGRYFYVASWKAIKHGNAN---MDVLIMLSTTIAYTYSIVVLLLAIIFKWP 522
>L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
b protein.
Length = 926
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +1
Query: 181 YAHWSQYHLCGGFISPPFI-----CWSLLDGIISRNVLSIQT 291
+ H +LCG ++PP WS DG+ + VL I T
Sbjct: 684 HRHLKNVYLCGNELTPPVAKLLIQKWSKFDGLTPKPVLHIHT 725
>L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
a protein.
Length = 960
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +1
Query: 181 YAHWSQYHLCGGFISPPFI-----CWSLLDGIISRNVLSIQT 291
+ H +LCG ++PP WS DG+ + VL I T
Sbjct: 721 HRHLKNVYLCGNELTPPVAKLLIQKWSKFDGLTPKPVLHIHT 762
>D83665-1|BAA20550.1| 1238|Caenorhabditis elegans copper
transporting ATPase protein.
Length = 1238
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 362 GCHYIYSQEYYAIKHWLLPGWLMAVQFFVTVALMLSFAAQVLLACVIVRWP 514
G Y Y + AIKH M V ++ + +++ VLL +I +WP
Sbjct: 475 GGRYFYVASWKAIKHGNAN---MDVLIMLSTTIAYTYSIVVLLLAIIFKWP 522
>AL117206-6|CAB60450.1| 734|Caenorhabditis elegans Hypothetical
protein Y67A10A.9 protein.
Length = 734
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +2
Query: 179 ATLIGASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDNFRF 331
A I +++ + L LL P W + E H GLW C +F F
Sbjct: 16 ALAIHFTLSLIAFLLCLLGLISPSWQQVNLENGRTEHHHGLWLDCKRDFSF 66
>AL032665-3|CAA21773.2| 1238|Caenorhabditis elegans Hypothetical
protein Y76A2A.2 protein.
Length = 1238
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 362 GCHYIYSQEYYAIKHWLLPGWLMAVQFFVTVALMLSFAAQVLLACVIVRWP 514
G Y Y + AIKH M V ++ + +++ VLL +I +WP
Sbjct: 475 GGRYFYVASWKAIKHGNAN---MDVLIMLSTTIAYTYSIVVLLLAIIFKWP 522
>AF039046-11|AAD34651.3| 388|Caenorhabditis elegans Hypothetical
protein R09B5.12 protein.
Length = 388
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 279 LHSNIWDCGSIALIISGSLVTGLTKNLMGVTISTAKNIMQ 398
++ N+ CG ++ G G+ NL G T TAK +Q
Sbjct: 282 IYHNLHHCGFSPKLMIGINFYGIELNLKGATTITAKRFLQ 321
>AF006635-1|AAB62695.1| 1116|Caenorhabditis elegans P-type ATPase
protein.
Length = 1116
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 362 GCHYIYSQEYYAIKHWLLPGWLMAVQFFVTVALMLSFAAQVLLACVIVRWP 514
G Y Y + AIKH M V ++ + +++ VLL +I +WP
Sbjct: 353 GGRYFYVASWKAIKHGNAN---MDVLIMLSATIAYTYSIVVLLLAIIFKWP 400
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,548,940
Number of Sequences: 27780
Number of extensions: 350372
Number of successful extensions: 1008
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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