Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_D08
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B6065 Cluster: PREDICTED: similar to ENSANGP000...    36   1.1  
UniRef50_UPI00003C0276 Cluster: PREDICTED: similar to lamina anc...    36   1.1  

>UniRef50_UPI00015B6065 Cluster: PREDICTED: similar to
           ENSANGP00000010745; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000010745 - Nasonia
           vitripennis
          Length = 643

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 541 ILKVVGASWLQTKIXSYVL 597
           +LKVVGASWLQT+I +Y+L
Sbjct: 1   MLKVVGASWLQTRISTYIL 19


>UniRef50_UPI00003C0276 Cluster: PREDICTED: similar to lamina
           ancestor CG10645-PC, isoform C; n=1; Apis mellifera|Rep:
           PREDICTED: similar to lamina ancestor CG10645-PC,
           isoform C - Apis mellifera
          Length = 544

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 541 ILKVVGASWLQTKIXSYVL 597
           +LKVVGASWLQT+I +Y+L
Sbjct: 1   MLKVVGASWLQTRISTYIL 19


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,153,000
Number of Sequences: 1657284
Number of extensions: 10323722
Number of successful extensions: 22678
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22673
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)