Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_D08
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   0.54 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   2.2  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   2.2  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   2.9  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   6.7  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   6.7  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   6.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.8  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 526 LNMSKILKVVGASWLQTKIXSYVLGYTWCTXYL 624
           LN+ K++   GA W +T I   VL  +    YL
Sbjct: 466 LNLRKLVDQFGAEWAETTIIPKVLAMSRDQNYL 498


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 291 CETGVYPEE*SGKNNTKCRLRAQPLEQHHHNN 386
           C+ G+YPE  +  N T  +L    L++ + ++
Sbjct: 92  CQQGIYPENKTLINETSLQLDENKLDKKNDDS 123


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 163 HQLRSRSINRPSPATLHSPIP 225
           HQ  ++S  RP+PA+ ++P P
Sbjct: 250 HQPATKSKPRPAPASRNAPEP 270


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 291 CETGVYPEE*SGKNNTKCRLRAQPLEQHHHNN 386
           C+ G+YPE  +  N T  +L    L++ + ++
Sbjct: 92  CQQGIYPENKTLINETSLQLDENKLDKKNDDS 123


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 291 CETGVYPEE*SGKNNTKCRLRAQPLEQ 371
           C+ G+YPE  +  N T  +L    L++
Sbjct: 92  CQQGIYPENKTLINETSLQLDENKLDK 118


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 68  VANYNEPCSNATTRDYIGNDE 6
           V  YNE C   +  DY  +DE
Sbjct: 297 VIGYNEVCELYSDWDYFWDDE 317


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 68  VANYNEPCSNATTRDYIGNDE 6
           V  YNE C   +  DY  +DE
Sbjct: 298 VIGYNEVCELYSDWDYFWDDE 318


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 68  VANYNEPCSNATTRDYIGNDE 6
           V  YNE C   +  DY  +DE
Sbjct: 298 VIGYNEVCELYSDWDYFWDDE 318


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -2

Query: 364 NGWARSRHLVLFLPLYSSG*TPVSHLC 284
           N W +  +L+    LY++    + H+C
Sbjct: 903 NDWLQLGYLIFVSTLYTANVVCICHVC 929


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 30  SSRVATGLIVVRHESPFQCRFKC-SRFR 110
           S+++   +++  +E PF+C  KC  RFR
Sbjct: 231 SNQLKAHVLIHTNEKPFECD-KCRGRFR 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,288
Number of Sequences: 336
Number of extensions: 2607
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)