Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_C23
         (353 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   2.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   2.1  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   4.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   4.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   8.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 314 VRF*NLYLQLQMQGKNQNK 258
           +RF N YL+L+ +G+  N+
Sbjct: 199 IRFLNQYLRLKPEGRISNR 217


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 314 VRF*NLYLQLQMQGKNQNK 258
           +RF N YL+L+ +G+  N+
Sbjct: 217 IRFLNQYLRLKPEGRISNR 235


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +2

Query: 65  LGLTHRRTLMFGTRRMQDPAALTTLGNDCDPSAS*FYDS 181
           LGL H       T    D A + T  +D DP  + + +S
Sbjct: 26  LGLKHDNYYELETHIFFDDAFIRTSEDDNDPHVNEYVES 64


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +2

Query: 65  LGLTHRRTLMFGTRRMQDPAALTTLGNDCDPSAS*FYDS 181
           LGL H       T    D A + T  +D DP  + + +S
Sbjct: 340 LGLKHDNYYELETHIFFDDAFIRTSEDDNDPHVNEYVES 378


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +2

Query: 65  LGLTHRRTLMFGTRRMQDPAALTTLGNDCDPSAS*FYDS 181
           LGL H       T    D A + T  +D DP  + + +S
Sbjct: 573 LGLKHDNYYELETHIFFDDAFIRTSEDDNDPHVNEYVES 611


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +2

Query: 65  LGLTHRRTLMFGTRRMQDPAALTTLGNDCDPSAS*FYDS 181
           LGL H       T    D A + T  +D DP  + + +S
Sbjct: 573 LGLKHDNYYELETHIFFDDAFIRTSEDDNDPHVNEYVES 611


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 43  IKFRLFIAWI 72
           I FR+FI WI
Sbjct: 304 IPFRVFILWI 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,632
Number of Sequences: 336
Number of extensions: 1309
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)