Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_C21
         (583 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.8  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   7.6  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   7.6  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +2

Query: 368 KCVMGMNWGPQLQPVSHVVISQSILGAVLPTL*MCS 475
           +C+ G+ W  ++  V  V    + L  V+P   +C+
Sbjct: 122 QCLCGVGWTGKVCDVEMVSCKDAALRKVVPLKKLCN 157


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 181 LRDIVSLYLTFCSRIT 134
           +RD+  L L  CSR T
Sbjct: 438 IRDVYFLRLAICSRFT 453


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 362 CIKCVMGMNWGPQLQPVS 415
           C + +  M +GPQ QP S
Sbjct: 69  CKRKIQFMPYGPQQQPAS 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,428
Number of Sequences: 336
Number of extensions: 2619
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)