Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_C20
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024812-4|AAF59550.1| 197|Caenorhabditis elegans Hypothetical ... 135 2e-32
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 31 0.94
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 31 0.94
AC006810-2|AAF59631.2| 297|Caenorhabditis elegans Hypothetical ... 29 2.2
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 29 2.9
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 29 2.9
U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 28 5.0
U10438-16|AAO61447.1| 977|Caenorhabditis elegans Glutamate rece... 28 5.0
U10438-15|AAA19090.3| 908|Caenorhabditis elegans Glutamate rece... 28 5.0
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 28 5.0
AJ131742-1|CAA10498.1| 590|Caenorhabditis elegans protein ( Cae... 28 5.0
AF318606-1|AAK01094.2| 977|Caenorhabditis elegans non-NMDA iono... 28 5.0
AF098989-4|AAK18956.2| 590|Caenorhabditis elegans Dystrobrevin ... 28 5.0
>AC024812-4|AAF59550.1| 197|Caenorhabditis elegans Hypothetical
protein Y54E10BR.6 protein.
Length = 197
Score = 135 bits (327), Expect = 2e-32
Identities = 60/94 (63%), Positives = 74/94 (78%)
Frame = +3
Query: 321 KYKAVVFRPFKGEVLXGIVTQVNKVGMFAQIGPLKCFISHHSIPXYMEFCPNVNPPCYKS 500
+YKA+VFRPFKG+V+ G+VTQVNKVG+F IGPL CFIS H IP MEF PN PCYK+
Sbjct: 94 RYKAIVFRPFKGQVVDGVVTQVNKVGIFCDIGPLSCFISRHCIPPDMEFDPNSEKPCYKT 153
Query: 501 KQEDXVIQEEDVIRLKIVGTRVDXSGIFAIGTLI 602
E VI+ +D IR+K++GTRVD + IFAIGTL+
Sbjct: 154 NDEANVIRNDDEIRVKLIGTRVDANDIFAIGTLM 187
Score = 121 bits (291), Expect = 5e-28
Identities = 51/70 (72%), Positives = 61/70 (87%)
Frame = +2
Query: 107 KMFYHISLEHEILLHPKYFGPQLLETVKQKLYTDVEGTCTGKYGFVIAVTQIDNIGAGLI 286
+MF+H+SL+HE+ LHPKYFGP L ET+K KL+ +VEGTCTGKYGFVIAVT ID IG GLI
Sbjct: 23 RMFFHLSLDHEVCLHPKYFGPNLNETIKMKLFNEVEGTCTGKYGFVIAVTTIDTIGHGLI 82
Query: 287 QHGQGFVMYP 316
Q G+GFV+YP
Sbjct: 83 QPGRGFVIYP 92
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 192 CLTVSNSCGPKYFGCNKISCSNEMW 118
C +S +C P F CN C +MW
Sbjct: 183 CPAISRTCEPNEFKCNNNKCVQKMW 207
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 192 CLTVSNSCGPKYFGCNKISCSNEMW 118
C +S +C P F CN C +MW
Sbjct: 183 CPAISRTCEPNEFKCNNNKCVQKMW 207
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 192 CLTVSNSCGPKYFGCNKISCSNEMW 118
C +S +C P F CN C +MW
Sbjct: 183 CPAISRTCEPNEFKCNNNKCVQKMW 207
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 192 CLTVSNSCGPKYFGCNKISCSNEMW 118
C +S +C P F CN C +MW
Sbjct: 183 CPAISRTCEPNEFKCNNNKCVQKMW 207
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 192 CLTVSNSCGPKYFGCNKISCSNEMW 118
C +S +C P F CN C +MW
Sbjct: 183 CPAISRTCEPNEFKCNNNKCVQKMW 207
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 192 CLTVSNSCGPKYFGCNKISCSNEMW 118
C +S +C P F CN C +MW
Sbjct: 183 CPAISRTCEPNEFKCNNNKCVQKMW 207
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 192 CLTVSNSCGPKYFGCNKISCSNEMW 118
C +S +C P F CN C +MW
Sbjct: 183 CPAISRTCEPNEFKCNNNKCVQKMW 207
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 192 CLTVSNSCGPKYFGCNKISCSNEMW 118
C +S +C P F CN C +MW
Sbjct: 183 CPAISRTCEPNEFKCNNNKCVQKMW 207
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 192 CLTVSNSCGPKYFGCNKISCSNEMW 118
C +S +C P F CN C +MW
Sbjct: 183 CPAISRTCEPNEFKCNNNKCVQKMW 207
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 192 CLTVSNSCGPKYFGCNKISCSNEMW 118
C +S +C P F CN C +MW
Sbjct: 183 CPAISRTCEPNEFKCNNNKCVQKMW 207
>AC006810-2|AAF59631.2| 297|Caenorhabditis elegans Hypothetical
protein Y5H2B.4 protein.
Length = 297
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -1
Query: 204 VYSFCLTVSNSCGPKYFGCNKISCSNEMW*NIFQRWTNYELVFHSIRFVLVVI 46
+YSFC N P +GC +SCS + +Q WT Y+ + + + F+ ++
Sbjct: 146 LYSFCNFELNI--P--YGCVTLSCSLNLC--FYQYWTTYKTIVYILTFLSTIV 192
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 313 VHDKPLSMLYETSSDIVYLSYRDDKSIFASTGAFH 209
V KP ++ TSSD V++ Y+ + +F FH
Sbjct: 797 VFQKPSKLMRSTSSDSVFIDYQYREKMFLDVSWFH 831
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 313 VHDKPLSMLYETSSDIVYLSYRDDKSIFASTGAFH 209
V KP ++ TSSD V++ Y+ + +F FH
Sbjct: 797 VFQKPSKLMRSTSSDSVFIDYQYREKMFLDVSWFH 831
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 313 VHDKPLSMLYETSSDIVYLSYRDDKSIFASTGAFH 209
V KP ++ TSSD V++ Y+ + +F FH
Sbjct: 797 VFQKPSKLMRSTSSDSVFIDYQYREKMFLDVSWFH 831
>U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical
protein C25G6.3 protein.
Length = 532
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 291 MDKGLSCTLXKYKAVVFRPFKGEVLXGIVTQVNKVGMFAQIGPLKCFISH 440
+ KG SC L + V+R + + GI+ Q +F+ LKCFI +
Sbjct: 321 LTKGESCILAESTMDVWRASLLDRIAGIIEQYKVTLLFSNSQLLKCFIKY 370
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 93 LSTAEKCSTTFHWSTKFCYIRNISVHNYWRQSNR 194
+ST EK +TT +T+ + +++ +WR SN+
Sbjct: 535 VSTTEKSTTTTTTTTEASKSKKVNMERFWRLSNK 568
>U10438-16|AAO61447.1| 977|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 2, isoform b protein.
Length = 977
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 164 GPQLLETVKQKLYTDVEGTCTGKYGFVIAVTQIDNIGAGLIQ 289
G ++ E +K+ + TD +GT TG+ F + N A +++
Sbjct: 393 GKKIAEAIKKVVLTDKDGTLTGRIQFDKVTGKRTNFSAEIVE 434
>U10438-15|AAA19090.3| 908|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 2, isoform a protein.
Length = 908
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 164 GPQLLETVKQKLYTDVEGTCTGKYGFVIAVTQIDNIGAGLIQ 289
G ++ E +K+ + TD +GT TG+ F + N A +++
Sbjct: 324 GKKIAEAIKKVVLTDKDGTLTGRIQFDKVTGKRTNFSAEIVE 365
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 93 LSTAEKCSTTFHWSTKFCYIRNISVHNYWRQSNR 194
+ST EK +TT +T+ + +++ +WR SN+
Sbjct: 535 VSTTEKSTTTTTTTTEASKSKKVNMERFWRLSNK 568
>AJ131742-1|CAA10498.1| 590|Caenorhabditis elegans protein (
Caenorhabditis elegansmRNA for dystrobrevin. ).
Length = 590
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -1
Query: 312 YMTNPCPCCMRPAPILSI*VTAMTNPYLPVQVPSTSVYSF 193
++++PCP C+ P+L + +++N Y PV + V SF
Sbjct: 234 FLSDPCPPCIMWLPLLHR-MASVSNVYHPVVCDACQVRSF 272
>AF318606-1|AAK01094.2| 977|Caenorhabditis elegans non-NMDA
ionotropic glutamate receptorsubunit GLR-2 protein.
Length = 977
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 164 GPQLLETVKQKLYTDVEGTCTGKYGFVIAVTQIDNIGAGLIQ 289
G ++ E +K+ + TD +GT TG+ F + N A +++
Sbjct: 393 GKKIAEAIKKVVLTDKDGTLTGRIQFDKVTGKRTNFSAEIVE 434
>AF098989-4|AAK18956.2| 590|Caenorhabditis elegans Dystrobrevin
homolog protein 1 protein.
Length = 590
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -1
Query: 312 YMTNPCPCCMRPAPILSI*VTAMTNPYLPVQVPSTSVYSF 193
++++PCP C+ P+L + +++N Y PV + V SF
Sbjct: 234 FLSDPCPPCIMWLPLLHR-MASVSNVYHPVVCDACQVRSF 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,804,088
Number of Sequences: 27780
Number of extensions: 311988
Number of successful extensions: 772
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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