Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_C18
         (568 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.60 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   4.2  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   5.6  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   5.6  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   5.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.6 bits (51), Expect = 0.60
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 143 RFCDFSLLIYLAAFVI 190
           ++C+F +L YL+ FVI
Sbjct: 320 KYCNFIILFYLSVFVI 335


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 196 LTNHECSKVYE*TKITKSSIL*TAGLLSQLEESSSVYRR 80
           +  H CS+     K+ +   + T   + QLEE S+  +R
Sbjct: 273 MPKHACSEYCRVFKMLQEEDIFTPDRIPQLEEMSNFLKR 311


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 488 DRGLTTXLQQRWVTRCGNIY*SGFG 562
           D  L   ++++W+  C ++  S FG
Sbjct: 149 DELLFKCMKEKWIPLCNSVTFSNFG 173


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 488 DRGLTTXLQQRWVTRCGNIY*SGFG 562
           D  L   ++++W+  C ++  S FG
Sbjct: 382 DELLFKCMKEKWIPLCNSVTFSNFG 406


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 488 DRGLTTXLQQRWVTRCGNIY*SGFG 562
           D  L   ++++W+  C ++  S FG
Sbjct: 382 DELLFKCMKEKWIPLCNSVTFSNFG 406


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,230
Number of Sequences: 336
Number of extensions: 2032
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)