Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_C18
         (568 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   1.7  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   5.3  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   6.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   9.2  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   9.2  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 465  IDLTAASAPPGTARRTTLSP 406
            I+L A S PPG  +RT L P
Sbjct: 1604 IELIANSLPPGCFKRTHLEP 1623


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 269  FHCPTTVNKRNPTTKTSHALLLQDTHKSRM 180
            FHCP +   RN   +  H+ +  D   S M
Sbjct: 953  FHCPRSDRIRNEMQQRCHSRVTMDNIVSEM 982


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +2

Query: 221 WSLLLDFAYLRLWDSETCLRILTTKCSANFWGVRV 325
           W  LL   YL LW  E   +    +  A  W +R+
Sbjct: 20  WLQLLCLKYLGLWPPEDTDQATRNRYIAYGWALRI 54


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 418  CASCGPRWRRRCRQVNAVVPMER*SRP 498
            C SCG  +   C    A +P ER  +P
Sbjct: 1827 CRSCGQIFCAECSDYTAHLPEERLYQP 1853


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 418  CASCGPRWRRRCRQVNAVVPMER*SRP 498
            C SCG  +   C    A +P ER  +P
Sbjct: 1828 CRSCGQIFCAECSDYTAHLPEERLYQP 1854


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,171
Number of Sequences: 2352
Number of extensions: 9433
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)