Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_C18
(568 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y10387-1|CAA71413.1| 624|Homo sapiens PAPS sunthetase protein. 31 3.7
U53447-1|AAC39894.1| 623|Homo sapiens PAPS synthase protein. 31 3.7
CR457028-1|CAG33309.1| 624|Homo sapiens PAPSS1 protein. 31 3.7
BC050627-1|AAH50627.1| 624|Homo sapiens 3'-phosphoadenosine 5'-... 31 3.7
BC032513-1|AAH32513.1| 571|Homo sapiens PAPSS1 protein protein. 31 3.7
BC011392-1|AAH11392.1| 603|Homo sapiens PAPSS1 protein protein. 31 3.7
AF105227-1|AAF40236.1| 624|Homo sapiens 3'-phosphoadenosine 5'-... 31 3.7
AF097721-1|AAF40235.1| 624|Homo sapiens 3'-phosphoadenosine 5'-... 31 3.7
AF033026-1|AAC28429.1| 624|Homo sapiens bifunctional ATP sulfur... 31 3.7
AF016496-1|AAD09325.1| 624|Homo sapiens ATP sulfurylase/APS kin... 31 3.7
AC098586-1|AAY40925.1| 257|Homo sapiens unknown protein. 31 3.7
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 30 6.5
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 30 6.5
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 30 6.5
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 30 6.5
AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens ... 30 6.5
AF217403-1|AAF24515.1| 837|Homo sapiens low density lipoprotein... 30 6.5
>Y10387-1|CAA71413.1| 624|Homo sapiens PAPS sunthetase protein.
Length = 624
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 242 RNPTTKTSHALLLQDTHKSRMQQG 171
RNP HALL+QDTHK +++G
Sbjct: 421 RNPV-HNGHALLMQDTHKQLLERG 443
>U53447-1|AAC39894.1| 623|Homo sapiens PAPS synthase protein.
Length = 623
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 242 RNPTTKTSHALLLQDTHKSRMQQG 171
RNP HALL+QDTHK +++G
Sbjct: 421 RNPV-HNGHALLMQDTHKQLLERG 443
>CR457028-1|CAG33309.1| 624|Homo sapiens PAPSS1 protein.
Length = 624
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 242 RNPTTKTSHALLLQDTHKSRMQQG 171
RNP HALL+QDTHK +++G
Sbjct: 421 RNPV-HNGHALLMQDTHKQLLERG 443
>BC050627-1|AAH50627.1| 624|Homo sapiens 3'-phosphoadenosine
5'-phosphosulfate synthase 1 protein.
Length = 624
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 242 RNPTTKTSHALLLQDTHKSRMQQG 171
RNP HALL+QDTHK +++G
Sbjct: 421 RNPV-HNGHALLMQDTHKQLLERG 443
>BC032513-1|AAH32513.1| 571|Homo sapiens PAPSS1 protein protein.
Length = 571
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 242 RNPTTKTSHALLLQDTHKSRMQQG 171
RNP HALL+QDTHK +++G
Sbjct: 421 RNPV-HNGHALLMQDTHKQLLERG 443
>BC011392-1|AAH11392.1| 603|Homo sapiens PAPSS1 protein protein.
Length = 603
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 242 RNPTTKTSHALLLQDTHKSRMQQG 171
RNP HALL+QDTHK +++G
Sbjct: 400 RNPV-HNGHALLMQDTHKQLLERG 422
>AF105227-1|AAF40236.1| 624|Homo sapiens 3'-phosphoadenosine
5'-phosphosulfate synthetase protein.
Length = 624
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 242 RNPTTKTSHALLLQDTHKSRMQQG 171
RNP HALL+QDTHK +++G
Sbjct: 421 RNPV-HNGHALLMQDTHKQLLERG 443
>AF097721-1|AAF40235.1| 624|Homo sapiens 3'-phosphoadenosine
5'-phosphosulfate synthetase protein.
Length = 624
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 242 RNPTTKTSHALLLQDTHKSRMQQG 171
RNP HALL+QDTHK +++G
Sbjct: 421 RNPV-HNGHALLMQDTHKQLLERG 443
>AF033026-1|AAC28429.1| 624|Homo sapiens bifunctional ATP
sulfurylase/adenosine 5'-phosphosulfate kinase protein.
Length = 624
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 242 RNPTTKTSHALLLQDTHKSRMQQG 171
RNP HALL+QDTHK +++G
Sbjct: 421 RNPV-HNGHALLMQDTHKQLLERG 443
>AF016496-1|AAD09325.1| 624|Homo sapiens ATP sulfurylase/APS kinase
protein.
Length = 624
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 242 RNPTTKTSHALLLQDTHKSRMQQG 171
RNP HALL+QDTHK +++G
Sbjct: 421 RNPV-HNGHALLMQDTHKQLLERG 443
>AC098586-1|AAY40925.1| 257|Homo sapiens unknown protein.
Length = 257
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 242 RNPTTKTSHALLLQDTHKSRMQQG 171
RNP HALL+QDTHK +++G
Sbjct: 54 RNPV-HNGHALLMQDTHKQLLERG 76
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 29.9 bits (64), Expect = 6.5
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = -2
Query: 396 HLNTHTRARASTSRDVVCTXARXQTRTPQKLALHFVVSIRRHVSLSHNRK*AKSNNKDQP 217
H + +R+R S SR + +R Q+R+ K S + S SH+ ++S +KDQ
Sbjct: 215 HSKSRSRSR-SGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQA 273
Query: 216 RAPI-----TGHSQITNAARYMSKLKSQNR 142
I G + + +R+ SK KS++R
Sbjct: 274 EEKIQNNDNVGKPKSRSPSRHKSKSKSRSR 303
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 29.9 bits (64), Expect = 6.5
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = -2
Query: 396 HLNTHTRARASTSRDVVCTXARXQTRTPQKLALHFVVSIRRHVSLSHNRK*AKSNNKDQP 217
H + +R+R S SR + +R Q+R+ K S + S SH+ ++S +KDQ
Sbjct: 215 HSKSRSRSR-SGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQA 273
Query: 216 RAPI-----TGHSQITNAARYMSKLKSQNR 142
I G + + +R+ SK KS++R
Sbjct: 274 EEKIQNNDNVGKPKSRSPSRHKSKSKSRSR 303
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 29.9 bits (64), Expect = 6.5
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = -2
Query: 396 HLNTHTRARASTSRDVVCTXARXQTRTPQKLALHFVVSIRRHVSLSHNRK*AKSNNKDQP 217
H + +R+R S SR + +R Q+R+ K S + S SH+ ++S +KDQ
Sbjct: 215 HSKSRSRSR-SGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQA 273
Query: 216 RAPI-----TGHSQITNAARYMSKLKSQNR 142
I G + + +R+ SK KS++R
Sbjct: 274 EEKIQNNDNVGKPKSRSPSRHKSKSKSRSR 303
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 29.9 bits (64), Expect = 6.5
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = -2
Query: 396 HLNTHTRARASTSRDVVCTXARXQTRTPQKLALHFVVSIRRHVSLSHNRK*AKSNNKDQP 217
H + +R+R S SR + +R Q+R+ K S + S SH+ ++S +KDQ
Sbjct: 215 HSKSRSRSR-SGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQA 273
Query: 216 RAPI-----TGHSQITNAARYMSKLKSQNR 142
I G + + +R+ SK KS++R
Sbjct: 274 EEKIQNNDNVGKPKSRSPSRHKSKSKSRSR 303
>AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ41637 fis, clone FEBRA1000030, weakly similar
to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 207
Score = 29.9 bits (64), Expect = 6.5
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -2
Query: 408 PCH*HLNTHTRARAS----TSRDVVCTXARXQTRTPQKLALHFVVSIRRH 271
P H H +THT A T VCT T T L+L++++S+ H
Sbjct: 28 PTHTHTHTHTHAHCPVPPYTHAHAVCTSLHTHTHT-HTLSLYWLISLYIH 76
>AF217403-1|AAF24515.1| 837|Homo sapiens low density lipoprotein
receptor protein.
Length = 837
Score = 29.9 bits (64), Expect = 6.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 417 LCVVRSQVAPTLPSSQCRCADGAVIAA*LR 506
LC+ SQ+ P P C C DG ++A +R
Sbjct: 657 LCLPASQINPHSPKFTCACPDGMLLARDMR 686
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,620,837
Number of Sequences: 237096
Number of extensions: 1308225
Number of successful extensions: 2866
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2862
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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