Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_C18
         (568 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82058-7|CAB04871.2|  140|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z81508-10|CAB04151.2|  140|Caenorhabditis elegans Hypothetical p...    28   4.1  
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ...    28   4.1  
Z81536-6|CAB04370.1|  352|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z81123-4|CAB03367.2|  986|Caenorhabditis elegans Hypothetical pr...    27   7.1  
Z54281-8|CAA91051.2|  986|Caenorhabditis elegans Hypothetical pr...    27   7.1  
Z68131-2|CAA92218.1|  614|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z66561-2|CAA91460.1|  331|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AC084159-14|AAK39369.2|  480|Caenorhabditis elegans Hypothetical...    27   9.4  

>Z82058-7|CAB04871.2|  140|Caenorhabditis elegans Hypothetical
           protein T27C5.10 protein.
          Length = 140

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +3

Query: 120 KPAVHKIDDFVILVYSY 170
           K  +HKIDDF++ +YSY
Sbjct: 4   KTFLHKIDDFLVEIYSY 20


>Z81508-10|CAB04151.2|  140|Caenorhabditis elegans Hypothetical
           protein T27C5.10 protein.
          Length = 140

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +3

Query: 120 KPAVHKIDDFVILVYSY 170
           K  +HKIDDF++ +YSY
Sbjct: 4   KTFLHKIDDFLVEIYSY 20


>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
           protein H43E16.1 protein.
          Length = 1203

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 20/49 (40%), Positives = 21/49 (42%)
 Frame = -2

Query: 456 TAASAPPGTARRTTLSPCH*HLNTHTRARASTSRDVVCTXARXQTRTPQ 310
           TA+SAP  TA  TT  P      T T    STS   V T     T T Q
Sbjct: 348 TASSAPASTAVVTTTMPVTTVQTTVTSIGTSTSPQAVVTTTGNPTTTAQ 396


>Z81536-6|CAB04370.1|  352|Caenorhabditis elegans Hypothetical
           protein F40D4.8 protein.
          Length = 352

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = +3

Query: 129 VHKIDDFVILVYSY 170
           +HKIDDF++ +YSY
Sbjct: 7   LHKIDDFLVQIYSY 20


>Z81123-4|CAB03367.2|  986|Caenorhabditis elegans Hypothetical protein
            F46C5.6 protein.
          Length = 986

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -3

Query: 140  NFMNSRLAESVRRKFFSLS*VNSLNE-ETKPRSTASYIQN 24
            + MN+R + ++RR  + LS V+SL+  E KP   +  ++N
Sbjct: 945  SLMNARSSSNIRRPGYGLSHVSSLSTFERKPAQMSCRVRN 984


>Z54281-8|CAA91051.2|  986|Caenorhabditis elegans Hypothetical protein
            F46C5.6 protein.
          Length = 986

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -3

Query: 140  NFMNSRLAESVRRKFFSLS*VNSLNE-ETKPRSTASYIQN 24
            + MN+R + ++RR  + LS V+SL+  E KP   +  ++N
Sbjct: 945  SLMNARSSSNIRRPGYGLSHVSSLSTFERKPAQMSCRVRN 984


>Z68131-2|CAA92218.1|  614|Caenorhabditis elegans Hypothetical
           protein B0395.3 protein.
          Length = 614

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = -2

Query: 315 PQKLALHFVVSIRRHVSLSHNRK*AKSNNKDQPRAPITGHSQITNAARYMSKL 157
           PQ+  LHF++S  +    + ++K AK   K    A I   S I  A + MSKL
Sbjct: 566 PQETELHFMISTFKSYGSTSSKKFAKELQK----ALIDMKSVINKATKEMSKL 614


>Z66561-2|CAA91460.1|  331|Caenorhabditis elegans Hypothetical
           protein F08G12.2 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -2

Query: 540 FPQRVTQRCCSXVVRPRSPLHRHNGIDLTAASAPPGTARRTT 415
           FPQ+  QR  S ++ P   L  H G   T A +P GT   T+
Sbjct: 16  FPQQTAQRF-SNLMAPTMVLLGHEGEIYTGAFSPDGTCLATS 56


>AC084159-14|AAK39369.2|  480|Caenorhabditis elegans Hypothetical
           protein Y73B3A.6 protein.
          Length = 480

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 471 NGIDLTAASAPPGTARRTTLSPCH*HLN 388
           NG+DLT  + PPGT   + + P   H N
Sbjct: 338 NGVDLTIRNIPPGTT--SLIQPLDVHFN 363


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,649,854
Number of Sequences: 27780
Number of extensions: 205735
Number of successful extensions: 463
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)