Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_C16
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   3.7  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   4.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.9  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   6.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.6  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = -1

Query: 602 HPALHDLPDHADRGPRSLHHSDALFLHNLHGVI 504
           H  +    DH DR PR  H        +  G+I
Sbjct: 245 HIPIRQCDDHRDRPPRHFHEEHDTRRASSRGII 277


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 554 SLHHSDALFLHNLHGVIQLYVDLFP*FIPGSAGAGAS 444
           SL HS A   H L     L  D +   +PG+   GAS
Sbjct: 217 SLTHSLAASNHLLSSGQHLLQDTYKSMLPGAQTVGAS 253


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
          protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 54 RIDSTRCSHRA*RQSL 7
          R+D  +CSHR  R+ L
Sbjct: 11 RLDQDQCSHRIVREHL 26


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 54  RIDSTRCSHRA*RQSL 7
           R+D  +CSHR  R+ L
Sbjct: 325 RLDQDQCSHRIVREHL 340


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 54  RIDSTRCSHRA*RQSL 7
           R+D  +CSHR  R+ L
Sbjct: 558 RLDQDQCSHRIVREHL 573


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 54  RIDSTRCSHRA*RQSL 7
           R+D  +CSHR  R+ L
Sbjct: 558 RLDQDQCSHRIVREHL 573


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/28 (35%), Positives = 11/28 (39%)
 Frame = +3

Query: 234 PPXXXXXXXXTSPQRRPALAAPCQGPLT 317
           PP         SP RR A + PC    T
Sbjct: 171 PPDWEGTTLSQSPNRRRASSNPCHNGAT 198


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 273 QRRPALAAPCQGPLTPPHHIHL 338
           Q+  +   P QGPLTP  + H+
Sbjct: 176 QKTKSSNRPHQGPLTPILYDHI 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,858
Number of Sequences: 336
Number of extensions: 2516
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)