Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_C12
         (342 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7SE38 Cluster: Predicted protein; n=1; Nematostella ve...    32   2.2  
UniRef50_Q8I397 Cluster: Mitochondrial carrier protein, putative...    31   3.8  
UniRef50_Q1ILN1 Cluster: Putative uncharacterized protein precur...    31   5.0  
UniRef50_Q4YPB2 Cluster: Putative uncharacterized protein; n=2; ...    31   5.0  

>UniRef50_A7SE38 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 167

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = -2

Query: 215 CKNVF-IFLFKNI--IYLCEGVLMTSHSFTTIKVXYSXNIFLI-ICNNFSV 75
           C NVF I+L  N+  IYLC  V      F  + +    N+F I +C+N  V
Sbjct: 43  CSNVFSIYLCSNVFSIYLCSNVFSIYLVFKCVSIYLCSNVFSIYLCSNVLV 93


>UniRef50_Q8I397 Cluster: Mitochondrial carrier protein, putative;
           n=2; Plasmodium|Rep: Mitochondrial carrier protein,
           putative - Plasmodium falciparum (isolate 3D7)
          Length = 1199

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +3

Query: 66  RMCH*KVVTDN*KNVXRIXNFYCCKTV*RHQYAFAQINYIFE*KNKYIFTPYR 224
           ++CH K+  D  +N+    N+ C K + RH Y+      +    NK I  PY+
Sbjct: 308 QICHSKIKEDM-RNLQNFKNYTCAKNMKRHLYSTVPFFNLKNKGNKNITLPYK 359


>UniRef50_Q1ILN1 Cluster: Putative uncharacterized protein
           precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
           Putative uncharacterized protein precursor -
           Acidobacteria bacterium (strain Ellin345)
          Length = 1075

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 180 NLSVRR-RTDDVTQFYNNKSYXFXKHFFNY 94
           NLSV R R D  TQF+ N SY   KH F +
Sbjct: 499 NLSVPRGRVDTNTQFFTNASYSTGKHNFKW 528


>UniRef50_Q4YPB2 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 748

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = -1

Query: 195 FIQKYNLSVRRRTDDVTQFYNNKSYXFXKHFFNYL 91
           FI K N       DD   +YNNK Y    HFFN+L
Sbjct: 520 FINKINKQYYYLFDDKINYYNNK-YEQDGHFFNFL 553


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,926,895
Number of Sequences: 1657284
Number of extensions: 2768127
Number of successful extensions: 5795
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5793
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10275329640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)